RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 KRTAP11-1Q8IUC1 163 aa14□□□□□ -0.17
YIF1A-202ENST00000376899 PSORS1C2Q9UIG4 136 aa14□□□□□ -0.17
YIF1A-202ENST00000376899 LINC00587B1AMM8 73 aa13.99□□□□□ -0.17
YIF1A-202ENST00000376899 LINC00158P58513 81 aa13.99□□□□□ -0.17
YIF1A-202ENST00000376899 MEIG1Q5JSS6 88 aa13.99□□□□□ -0.17
YIF1A-202ENST00000376899 SMIM13P0DJ93 91 aa13.98□□□□□ -0.17
YIF1A-202ENST00000376899 LBHQ53QV2 105 aaPredicted RBP13.97□□□□□ -0.17
YIF1A-202ENST00000376899 UBE2BP63146 152 aa13.96□□□□□ -0.17
YIF1A-202ENST00000376899 MRPL55Q7Z7F7 128 aaKnown RBP13.96□□□□□ -0.17
YIF1A-202ENST00000376899 A0A0U1RRA0 63 aa13.95□□□□□ -0.18
YIF1A-202ENST00000376899 C5orf52A6NGY3 159 aa13.95□□□□□ -0.18
YIF1A-202ENST00000376899 VPREB1P12018 145 aa13.95□□□□□ -0.18
YIF1A-202ENST00000376899 AKR1D1P51857 326 aa13.95□□□□□ -0.18
YIF1A-202ENST00000376899 SNRPEP62304 92 aaKnown RBP13.95□□□□□ -0.18
YIF1A-202ENST00000376899 MIR7-3HGQ8N6C7 128 aa13.94□□□□□ -0.18
YIF1A-202ENST00000376899 RPL24P83731 157 aaKnown RBP13.92□□□□□ -0.18
YIF1A-202ENST00000376899 SRSF9Q13242 221 aaKnown RBP eCLIP13.92□□□□□ -0.18
YIF1A-202ENST00000376899 C1orf137Q5JT78 98 aa13.92□□□□□ -0.18
YIF1A-202ENST00000376899 NKAPP1Q8N9T2 125 aa13.92□□□□□ -0.18
YIF1A-202ENST00000376899 Q8NDZ9 215 aa13.92□□□□□ -0.18
YIF1A-202ENST00000376899 IGKV2D-26A0A0A0MRZ7 120 aa13.91□□□□□ -0.18
YIF1A-202ENST00000376899 LINC00167Q96N53 147 aa13.91□□□□□ -0.18
YIF1A-202ENST00000376899 MYCBP2O75592 4640 aa13.9□□□□□ -0.18
YIF1A-202ENST00000376899 A0A0J9YXY3 114 aa13.89□□□□□ -0.19
YIF1A-202ENST00000376899 SPINK6Q6UWN8 80 aa13.89□□□□□ -0.19
YIF1A-202ENST00000376899 ATOH7Q8N100 152 aa13.89□□□□□ -0.19
YIF1A-202ENST00000376899 KRTAP29-1A8MX34 341 aaPredicted RBP13.88□□□□□ -0.19
YIF1A-202ENST00000376899 LOC107984156A0A0G2JMH3 177 aa13.87□□□□□ -0.19
YIF1A-202ENST00000376899 IGLV7-43P04211 117 aa13.87□□□□□ -0.19
YIF1A-202ENST00000376899 ANKRD39Q53RE8 183 aa13.87□□□□□ -0.19
YIF1A-202ENST00000376899 ARL17AQ8IVW1 177 aa13.87□□□□□ -0.19
YIF1A-202ENST00000376899 GAGE10A6NGK3 116 aa13.85□□□□□ -0.19
YIF1A-202ENST00000376899 RPL37AP8A6NKH3 93 aa13.84□□□□□ -0.19
YIF1A-202ENST00000376899 ZNF815PA8K554 130 aa13.84□□□□□ -0.19
YIF1A-202ENST00000376899 OXTP01178 125 aa13.84□□□□□ -0.19
YIF1A-202ENST00000376899 BOD1L2Q8IYS8 172 aa13.84□□□□□ -0.19
YIF1A-202ENST00000376899 DAND5Q8N907 189 aa13.84□□□□□ -0.19
YIF1A-202ENST00000376899 TTTY13Q9BZ97 58 aa13.84□□□□□ -0.19
YIF1A-202ENST00000376899 TIMM17BO60830 172 aa13.82□□□□□ -0.2
YIF1A-202ENST00000376899 LITAFQ99732 161 aa13.82□□□□□ -0.2
YIF1A-202ENST00000376899 FAT3Q8TDW7 4589 aa13.81□□□□□ -0.2
YIF1A-202ENST00000376899 IGLV1-50A0A075B6I6 118 aa13.81□□□□□ -0.2
YIF1A-202ENST00000376899 ADAMTSL4-AS1Q5T5F5 129 aa13.81□□□□□ -0.2
YIF1A-202ENST00000376899 LRP1Q07954 4544 aaKnown RBP13.8□□□□□ -0.2
YIF1A-202ENST00000376899 M0R378 163 aa13.8□□□□□ -0.2
YIF1A-202ENST00000376899 BCE1O60756 84 aa13.79□□□□□ -0.2
YIF1A-202ENST00000376899 IGKV2-28A0A075B6P5 120 aa13.78□□□□□ -0.2
YIF1A-202ENST00000376899 IGKV2D-28P01615 120 aa13.78□□□□□ -0.2
YIF1A-202ENST00000376899 SOSTDC1Q6X4U4 206 aa13.77□□□□□ -0.21
YIF1A-202ENST00000376899 MIEN1Q9BRT3 115 aa13.77□□□□□ -0.21
YIF1A-202ENST00000376899 DIRC1Q969H9 104 aa13.76□□□□□ -0.21
YIF1A-202ENST00000376899 ZNF861PO60384 105 aa13.75□□□□□ -0.21
YIF1A-202ENST00000376899 NDUFC2O95298 119 aa13.75□□□□□ -0.21
YIF1A-202ENST00000376899 REG3GQ6UW15 175 aa13.75□□□□□ -0.21
YIF1A-202ENST00000376899 PCP2Q8IVA1 136 aa13.75□□□□□ -0.21
YIF1A-202ENST00000376899 DMBT1Q9UGM3 2413 aaPredicted RBP13.74□□□□□ -0.21
YIF1A-202ENST00000376899 H0Y9J4 135 aa13.74□□□□□ -0.21
YIF1A-202ENST00000376899 J3QL48 77 aa13.74□□□□□ -0.21
YIF1A-202ENST00000376899 NCR3O14931 201 aa13.74□□□□□ -0.21
YIF1A-202ENST00000376899 EIF4EBP3O60516 100 aaPredicted RBP13.74□□□□□ -0.21
YIF1A-202ENST00000376899 SCGB1D1O95968 90 aa13.74□□□□□ -0.21
YIF1A-202ENST00000376899 TRBV10-2A0A0K0K1G8 114 aa13.73□□□□□ -0.21
YIF1A-202ENST00000376899 HSBP1L1C9JCN9 74 aa13.73□□□□□ -0.21
YIF1A-202ENST00000376899 KRTAP13-1Q8IUC0 172 aa13.72□□□□□ -0.21
YIF1A-202ENST00000376899 LINC00308Q8TCZ7 52 aa13.72□□□□□ -0.21
YIF1A-202ENST00000376899 TMEM126AQ9H061 195 aa13.72□□□□□ -0.21
YIF1A-202ENST00000376899 SPANXB1Q9NS25 103 aaPredicted RBP13.72□□□□□ -0.21
YIF1A-202ENST00000376899 TMEM238C9JI98 176 aa13.71□□□□□ -0.21
YIF1A-202ENST00000376899 NPC2P61916 151 aa13.71□□□□□ -0.21
YIF1A-202ENST00000376899 SCGB1D4Q6XE38 83 aa13.71□□□□□ -0.21
YIF1A-202ENST00000376899 LINC01600Q96MT4 127 aa13.71□□□□□ -0.21
YIF1A-202ENST00000376899 MT1HL1P0DM35 61 aa13.7□□□□□ -0.22
YIF1A-202ENST00000376899 RPL28P46779 137 aaKnown RBP13.7□□□□□ -0.22
YIF1A-202ENST00000376899 SPANXDQ9BXN6 97 aa13.7□□□□□ -0.22
YIF1A-202ENST00000376899 SPANXCQ9NY87 97 aa13.7□□□□□ -0.22
YIF1A-202ENST00000376899 TRBV10-3A0A0K0K1G6 114 aa13.68□□□□□ -0.22
YIF1A-202ENST00000376899 PRYO14603 147 aa13.68□□□□□ -0.22
YIF1A-202ENST00000376899 KCNQ1DNQ9H478 68 aa13.67□□□□□ -0.22
YIF1A-202ENST00000376899 TMA7Q9Y2S6 64 aaKnown RBP13.66□□□□□ -0.22
YIF1A-202ENST00000376899 SPRR1AP35321 89 aa13.65□□□□□ -0.22
YIF1A-202ENST00000376899 UBE2AP49459 152 aa13.65□□□□□ -0.22
YIF1A-202ENST00000376899 PPDPFQ9H3Y8 114 aa13.65□□□□□ -0.22
YIF1A-202ENST00000376899 DDTP30046 118 aa13.64□□□□□ -0.23
YIF1A-202ENST00000376899 JOSD1Q15040 202 aaPredicted RBP13.64□□□□□ -0.23
YIF1A-202ENST00000376899 Q6ZVH6 145 aa13.64□□□□□ -0.23
YIF1A-202ENST00000376899 FAM19A1Q7Z5A9 133 aa13.64□□□□□ -0.23
YIF1A-202ENST00000376899 IGLV6-57P01721 117 aa13.63□□□□□ -0.23
YIF1A-202ENST00000376899 KRTAP1-4P0C5Y4 121 aa13.63□□□□□ -0.23
YIF1A-202ENST00000376899 IFITM1P13164 125 aa13.62□□□□□ -0.23
YIF1A-202ENST00000376899 PRLHP81277 87 aa13.62□□□□□ -0.23
YIF1A-202ENST00000376899 KRTAP4-16G5E9R7 235 aaPredicted RBP13.61□□□□□ -0.23
YIF1A-202ENST00000376899 LINC00337Q8N6G1 96 aa13.61□□□□□ -0.23
YIF1A-202ENST00000376899 COPS9Q8WXC6 57 aa13.61□□□□□ -0.23
YIF1A-202ENST00000376899 KRTAP10-8P60410 259 aa13.6□□□□□ -0.23
YIF1A-202ENST00000376899 S100A12P80511 92 aa13.59□□□□□ -0.23
YIF1A-202ENST00000376899 S100A7L2Q5SY68 101 aa13.59□□□□□ -0.23
YIF1A-202ENST00000376899 COX8AP10176 69 aa13.58□□□□□ -0.24
YIF1A-202ENST00000376899 TNXBP22105 4242 aa13.57□□□□□ -0.24
YIF1A-202ENST00000376899 DLEU1O43261 78 aa13.56□□□□□ -0.24
YIF1A-202ENST00000376899 MUSTN1Q8IVN3 82 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms