RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 A0A1B0GUV1 79 aa15□□□□□ -0.01
SYNDIG1-201ENST00000376862 CSNK1G2-AS1Q8NCQ2 148 aa15□□□□□ -0.01
SYNDIG1-201ENST00000376862 PKIGQ9Y2B9 76 aa15□□□□□ -0.01
SYNDIG1-201ENST00000376862 IGLV10-54A0A075B6I4 117 aa14.99□□□□□ -0.01
SYNDIG1-201ENST00000376862 TRBV7-4A0A0J9YYF1 115 aa14.99□□□□□ -0.01
SYNDIG1-201ENST00000376862 IGHV4-31P0DP07 118 aa14.99□□□□□ -0.01
SYNDIG1-201ENST00000376862 C9orf66Q5T8R8 295 aa14.98□□□□□ -0.01
SYNDIG1-201ENST00000376862 MUC7Q8TAX7 377 aa14.98□□□□□ -0.01
SYNDIG1-201ENST00000376862 IGHV4-28A0A0C4DH34 117 aa14.97□□□□□ -0.01
SYNDIG1-201ENST00000376862 MIFP14174 115 aa14.96□□□□□ -0.01
SYNDIG1-201ENST00000376862 APCP25054 2843 aa14.96□□□□□ -0.02
SYNDIG1-201ENST00000376862 CCL24O00175 119 aa14.96□□□□□ -0.02
SYNDIG1-201ENST00000376862 NDUFC1O43677 76 aa14.96□□□□□ -0.02
SYNDIG1-201ENST00000376862 CD164L2Q6UWJ8 174 aa14.96□□□□□ -0.02
SYNDIG1-201ENST00000376862 CHCHD10Q8WYQ3 142 aaPredicted RBP14.95□□□□□ -0.02
SYNDIG1-201ENST00000376862 PDE6GP18545 87 aa14.94□□□□□ -0.02
SYNDIG1-201ENST00000376862 NREPQ16612 68 aa14.94□□□□□ -0.02
SYNDIG1-201ENST00000376862 DEFB113Q30KQ7 82 aa14.94□□□□□ -0.02
SYNDIG1-201ENST00000376862 C10orf25Q5T742 122 aa14.93□□□□□ -0.02
SYNDIG1-201ENST00000376862 LINC01006Q8NI28 216 aa14.92□□□□□ -0.02
SYNDIG1-201ENST00000376862 SONP18583 2426 aaKnown RBP14.91□□□□□ -0.02
SYNDIG1-201ENST00000376862 NF1P21359 2839 aa14.91□□□□□ -0.02
SYNDIG1-201ENST00000376862 IGLV6-57P01721 117 aa14.91□□□□□ -0.02
SYNDIG1-201ENST00000376862 FAM229BQ4G0N7 80 aa14.91□□□□□ -0.02
SYNDIG1-201ENST00000376862 UNQ6190/PRO20217Q6UXQ8 127 aa14.91□□□□□ -0.02
SYNDIG1-201ENST00000376862 C19orf73Q9NVV2 129 aa14.91□□□□□ -0.02
SYNDIG1-201ENST00000376862 BRK1Q8WUW1 75 aa14.9□□□□□ -0.02
SYNDIG1-201ENST00000376862 ATP5EP56381 51 aaPredicted RBP14.9□□□□□ -0.02
SYNDIG1-201ENST00000376862 TMEM254Q8TBM7 123 aa14.9□□□□□ -0.02
SYNDIG1-201ENST00000376862 BPY2O14599 106 aa14.88□□□□□ -0.03
SYNDIG1-201ENST00000376862 CCDC168Q8NDH2 2452 aa14.87□□□□□ -0.03
SYNDIG1-201ENST00000376862 ANGP03950 147 aaKnown RBP14.87□□□□□ -0.03
SYNDIG1-201ENST00000376862 ITPR3Q14573 2671 aa14.86□□□□□ -0.03
SYNDIG1-201ENST00000376862 FN1P02751 2386 aaKnown RBP14.86□□□□□ -0.03
SYNDIG1-201ENST00000376862 CMC4P56277 68 aaPredicted RBP14.86□□□□□ -0.03
SYNDIG1-201ENST00000376862 REG3AQ06141 175 aa14.86□□□□□ -0.03
SYNDIG1-201ENST00000376862 Q8N9L7 120 aa14.86□□□□□ -0.03
SYNDIG1-201ENST00000376862 TENM4Q6N022 2769 aa14.85□□□□□ -0.03
SYNDIG1-201ENST00000376862 MPLKIPQ8TAP9 179 aa14.85□□□□□ -0.03
SYNDIG1-201ENST00000376862 A0A0U1RQV1 116 aa14.84□□□□□ -0.03
SYNDIG1-201ENST00000376862 H3BQ85 93 aa14.83□□□□□ -0.04
SYNDIG1-201ENST00000376862 SPAG11BQ08648 103 aa14.83□□□□□ -0.04
SYNDIG1-201ENST00000376862 DIRC1Q969H9 104 aa14.83□□□□□ -0.04
SYNDIG1-201ENST00000376862 KRTAP1-3Q8IUG1 177 aa14.82□□□□□ -0.04
SYNDIG1-201ENST00000376862 CYSRT1A8MQ03 144 aa14.81□□□□□ -0.04
SYNDIG1-201ENST00000376862 PRO0255Q9UI72 69 aa14.81□□□□□ -0.04
SYNDIG1-201ENST00000376862 SETD2Q9BYW2 2564 aaPredicted RBP14.8□□□□□ -0.04
SYNDIG1-201ENST00000376862 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.8□□□□□ -0.04
SYNDIG1-201ENST00000376862 LINC00612Q8N6U2 182 aa14.8□□□□□ -0.04
SYNDIG1-201ENST00000376862 FLNAP21333 2647 aaKnown RBP14.79□□□□□ -0.04
SYNDIG1-201ENST00000376862 NBEAL2Q6ZNJ1 2754 aa14.79□□□□□ -0.04
SYNDIG1-201ENST00000376862 ERC2-IT1O76042 136 aa14.79□□□□□ -0.04
SYNDIG1-201ENST00000376862 PRYO14603 147 aa14.77□□□□□ -0.04
SYNDIG1-201ENST00000376862 IGLV1-51P01701 117 aa14.77□□□□□ -0.04
SYNDIG1-201ENST00000376862 COX7BP24311 80 aa14.77□□□□□ -0.04
SYNDIG1-201ENST00000376862 XAGE1AQ9HD64 81 aa14.77□□□□□ -0.04
SYNDIG1-201ENST00000376862 IGKV4-1P06312 121 aa14.77□□□□□ -0.05
SYNDIG1-201ENST00000376862 A0A0J9YWU9 116 aa14.76□□□□□ -0.05
SYNDIG1-201ENST00000376862 ZNF73O43830 326 aaPredicted RBP14.76□□□□□ -0.05
SYNDIG1-201ENST00000376862 IGHV4-30-4P0DP06 118 aa14.76□□□□□ -0.05
SYNDIG1-201ENST00000376862 OCR1Q9BZK8 76 aa14.75□□□□□ -0.05
SYNDIG1-201ENST00000376862 ESM1Q9NQ30 184 aa14.75□□□□□ -0.05
SYNDIG1-201ENST00000376862 GCN1Q92616 2671 aaKnown RBP14.74□□□□□ -0.05
SYNDIG1-201ENST00000376862 FUSP35637 526 aaKnown RBP eCLIP14.73□□□□□ -0.05
SYNDIG1-201ENST00000376862 ELOF1P60002 83 aaKnown RBP14.73□□□□□ -0.05
SYNDIG1-201ENST00000376862 DNAJC9-AS1A6NH13 148 aa14.72□□□□□ -0.05
SYNDIG1-201ENST00000376862 C1orf195Q5TG92 126 aa14.72□□□□□ -0.05
SYNDIG1-201ENST00000376862 ACANP16112 2415 aa14.72□□□□□ -0.05
SYNDIG1-201ENST00000376862 F8WDY8 70 aa14.71□□□□□ -0.05
SYNDIG1-201ENST00000376862 ESRGQ1W209 222 aa14.71□□□□□ -0.05
SYNDIG1-201ENST00000376862 Q6ZTC4 211 aa14.71□□□□□ -0.05
SYNDIG1-201ENST00000376862 HIGD2AQ9BW72 106 aa14.71□□□□□ -0.05
SYNDIG1-201ENST00000376862 DAD1P61803 113 aa14.7□□□□□ -0.06
SYNDIG1-201ENST00000376862 ITPR2Q14571 2701 aa14.7□□□□□ -0.06
SYNDIG1-201ENST00000376862 C6orf48Q9UBA6 75 aa14.69□□□□□ -0.06
SYNDIG1-201ENST00000376862 X6R8D5 127 aa14.69□□□□□ -0.06
SYNDIG1-201ENST00000376862 MTORP42345 2549 aa14.66□□□□□ -0.06
SYNDIG1-201ENST00000376862 DEFB4AO15263 64 aa14.65□□□□□ -0.06
SYNDIG1-201ENST00000376862 C3orf84H3BNL1 204 aa14.64□□□□□ -0.07
SYNDIG1-201ENST00000376862 PDZD2O15018 2839 aa14.64□□□□□ -0.07
SYNDIG1-201ENST00000376862 GVQW2A0A096LPI5 108 aaPredicted RBP14.63□□□□□ -0.07
SYNDIG1-201ENST00000376862 KLK12Q9UKR0 248 aa14.63□□□□□ -0.07
SYNDIG1-201ENST00000376862 V9GYY9 64 aa14.62□□□□□ -0.07
SYNDIG1-201ENST00000376862 HELZ2Q9BYK8 2649 aaKnown RBP14.61□□□□□ -0.07
SYNDIG1-201ENST00000376862 VPREB1P12018 145 aa14.6□□□□□ -0.07
SYNDIG1-201ENST00000376862 LINC00528Q8N1L1 170 aa14.6□□□□□ -0.07
SYNDIG1-201ENST00000376862 FAM30AQ9NZY2 134 aa14.59□□□□□ -0.07
SYNDIG1-201ENST00000376862 CELA1Q9UNI1 258 aa14.59□□□□□ -0.07
SYNDIG1-201ENST00000376862 HIGD2BQ4VC39 106 aa14.58□□□□□ -0.08
SYNDIG1-201ENST00000376862 SMIM29Q86T20 159 aa14.56□□□□□ -0.08
SYNDIG1-201ENST00000376862 LRCOL1A6NCL2 159 aa14.56□□□□□ -0.08
SYNDIG1-201ENST00000376862 LYRM9A8MSI8 78 aa14.55□□□□□ -0.08
SYNDIG1-201ENST00000376862 PRR34Q9NV39 138 aa14.55□□□□□ -0.08
SYNDIG1-201ENST00000376862 hDV103S1A0JD37 113 aa14.54□□□□□ -0.08
SYNDIG1-201ENST00000376862 M0R378 163 aa14.54□□□□□ -0.08
SYNDIG1-201ENST00000376862 KRTAP1-1Q07627 177 aa14.54□□□□□ -0.08
SYNDIG1-201ENST00000376862 SEC61GP60059 68 aa14.53□□□□□ -0.08
SYNDIG1-201ENST00000376862 ANK3Q12955 4377 aaKnown RBP14.51□□□□□ -0.09
SYNDIG1-201ENST00000376862 DEFB105AQ8NG35 78 aa14.51□□□□□ -0.09
SYNDIG1-201ENST00000376862 UNC79Q9P2D8 2635 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms