RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 PMVKQ15126 192 aa10.12□□□□□ -0.79
HLA-A-201ENST00000376802 C18orf32Q8TCD1 76 aa10.12□□□□□ -0.79
HLA-A-201ENST00000376802 KRTAP9-2Q9BYQ4 174 aa10.11□□□□□ -0.79
HLA-A-201ENST00000376802 IGLV5-39A0A0G2JS06 123 aa10.1□□□□□ -0.79
HLA-A-201ENST00000376802 ATP5LO75964 103 aa10.1□□□□□ -0.79
HLA-A-201ENST00000376802 LINC00304Q8N9R0 145 aa10.1□□□□□ -0.79
HLA-A-201ENST00000376802 FAT4Q6V0I7 4981 aa10.1□□□□□ -0.79
HLA-A-201ENST00000376802 PFN2P35080 140 aa10.09□□□□□ -0.79
HLA-A-201ENST00000376802 PRLHP81277 87 aa10.09□□□□□ -0.79
HLA-A-201ENST00000376802 C5orf52A6NGY3 159 aa10.08□□□□□ -0.8
HLA-A-201ENST00000376802 VPREB1P12018 145 aa10.08□□□□□ -0.8
HLA-A-201ENST00000376802 BAGE3Q86Y29 109 aa10.08□□□□□ -0.8
HLA-A-201ENST00000376802 TMEM238C9JI98 176 aa10.07□□□□□ -0.8
HLA-A-201ENST00000376802 H3BRM9 83 aa10.07□□□□□ -0.8
HLA-A-201ENST00000376802 NDUFA6P56556 154 aa10.07□□□□□ -0.8
HLA-A-201ENST00000376802 Q8NDZ9 215 aa10.07□□□□□ -0.8
HLA-A-201ENST00000376802 TMEM126AQ9H061 195 aa10.07□□□□□ -0.8
HLA-A-201ENST00000376802 SND1-IT1Q9HBX3 110 aa10.07□□□□□ -0.8
HLA-A-201ENST00000376802 IGLC3P0DOY3 106 aa10.07□□□□□ -0.8
HLA-A-201ENST00000376802 A0A096LNJ9 63 aa10.06□□□□□ -0.8
HLA-A-201ENST00000376802 IGKV2D-26A0A0A0MRZ7 120 aa10.06□□□□□ -0.8
HLA-A-201ENST00000376802 M0R378 163 aa10.06□□□□□ -0.8
HLA-A-201ENST00000376802 TPRXLQ17RH7 258 aa10.06□□□□□ -0.8
HLA-A-201ENST00000376802 FA2HQ7L5A8 372 aa10.06□□□□□ -0.8
HLA-A-201ENST00000376802 FAM19A1Q7Z5A9 133 aa10.06□□□□□ -0.8
HLA-A-201ENST00000376802 CHCHD1Q96BP2 118 aaKnown RBP10.06□□□□□ -0.8
HLA-A-201ENST00000376802 SERF1AO75920 110 aa10.05□□□□□ -0.8
HLA-A-201ENST00000376802 ZNF22P17026 224 aaPredicted RBP10.05□□□□□ -0.8
HLA-A-201ENST00000376802 LINC00310P59036 64 aa10.05□□□□□ -0.8
HLA-A-201ENST00000376802 SNRPEP62304 92 aaKnown RBP10.05□□□□□ -0.8
HLA-A-201ENST00000376802 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
HLA-A-201ENST00000376802 ERG28Q9UKR5 140 aa10.05□□□□□ -0.8
HLA-A-201ENST00000376802 LINC00614P0C842 121 aa10.04□□□□□ -0.8
HLA-A-201ENST00000376802 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
HLA-A-201ENST00000376802 CTAG1AP78358 180 aa10.03□□□□□ -0.8
HLA-A-201ENST00000376802 HIST3H2BBQ8N257 126 aa10.03□□□□□ -0.8
HLA-A-201ENST00000376802 URB1-AS1Q96HZ7 61 aa10.03□□□□□ -0.8
HLA-A-201ENST00000376802 ZNF625Q96I27 306 aaPredicted RBP10.03□□□□□ -0.8
HLA-A-201ENST00000376802 COX17Q14061 63 aa10.02□□□□□ -0.81
HLA-A-201ENST00000376802 C3orf22Q8N5N4 141 aa10.02□□□□□ -0.81
HLA-A-201ENST00000376802 CDIP1Q9H305 208 aa10.02□□□□□ -0.81
HLA-A-201ENST00000376802 RPL24P83731 157 aaKnown RBP10.01□□□□□ -0.81
HLA-A-201ENST00000376802 HSBP1O75506 76 aa10□□□□□ -0.81
HLA-A-201ENST00000376802 MUC17Q685J3 4493 aa10□□□□□ -0.81
HLA-A-201ENST00000376802 C11orf86A6NJI1 115 aa9.99□□□□□ -0.81
HLA-A-201ENST00000376802 S100A2P29034 98 aa9.99□□□□□ -0.81
HLA-A-201ENST00000376802 HIST1H2BLQ99880 126 aa9.98□□□□□ -0.81
HLA-A-201ENST00000376802 PMCHL1Q16048 86 aa9.97□□□□□ -0.81
HLA-A-201ENST00000376802 LCE2CQ5TA81 110 aa9.97□□□□□ -0.81
HLA-A-201ENST00000376802 LOC105371267A0A1B0GV96 52 aa9.96□□□□□ -0.82
HLA-A-201ENST00000376802 PPDPFQ9H3Y8 114 aa9.96□□□□□ -0.82
HLA-A-201ENST00000376802 HBDP02042 147 aa9.95□□□□□ -0.82
HLA-A-201ENST00000376802 SPRR4Q96PI1 79 aa9.95□□□□□ -0.82
HLA-A-201ENST00000376802 HIGD2AQ9BW72 106 aa9.95□□□□□ -0.82
HLA-A-201ENST00000376802 TMEM170BQ5T4T1 132 aa9.94□□□□□ -0.82
HLA-A-201ENST00000376802 SFTA2Q6UW10 78 aa9.94□□□□□ -0.82
HLA-A-201ENST00000376802 FABP4P15090 132 aa9.93□□□□□ -0.82
HLA-A-201ENST00000376802 FAM19A2Q8N3H0 131 aa9.93□□□□□ -0.82
HLA-A-201ENST00000376802 LINC00158P58513 81 aa9.92□□□□□ -0.82
HLA-A-201ENST00000376802 SPAG11AQ6PDA7 123 aa9.92□□□□□ -0.82
HLA-A-201ENST00000376802 HSPB8Q9UJY1 196 aa9.92□□□□□ -0.82
HLA-A-201ENST00000376802 LEPROTL1O95214 131 aa9.9□□□□□ -0.82
HLA-A-201ENST00000376802 C4orf48Q5BLP8 95 aa9.9□□□□□ -0.82
HLA-A-201ENST00000376802 A0A0U1RRA0 63 aa9.89□□□□□ -0.83
HLA-A-201ENST00000376802 TMEM223A0PJW6 202 aa9.88□□□□□ -0.83
HLA-A-201ENST00000376802 FP248Q71RG6 208 aaPredicted RBP9.88□□□□□ -0.83
HLA-A-201ENST00000376802 CHTOPQ9Y3Y2 248 aaKnown RBP9.88□□□□□ -0.83
HLA-A-201ENST00000376802 SPRR1AP35321 89 aa9.87□□□□□ -0.83
HLA-A-201ENST00000376802 KRTAP13-3Q3SY46 172 aa9.87□□□□□ -0.83
HLA-A-201ENST00000376802 DAND5Q8N907 189 aa9.87□□□□□ -0.83
HLA-A-201ENST00000376802 KRTAP4-16G5E9R7 235 aaPredicted RBP9.86□□□□□ -0.83
HLA-A-201ENST00000376802 SMIM13P0DJ93 91 aa9.86□□□□□ -0.83
HLA-A-201ENST00000376802 Q8NBF4 154 aa9.86□□□□□ -0.83
HLA-A-201ENST00000376802 KCNQ1DNQ9H478 68 aa9.86□□□□□ -0.83
HLA-A-201ENST00000376802 ZNF706Q9Y5V0 76 aaPredicted RBP9.86□□□□□ -0.83
HLA-A-201ENST00000376802 PRYO14603 147 aa9.85□□□□□ -0.83
HLA-A-201ENST00000376802 AKR1D1P51857 326 aa9.85□□□□□ -0.83
HLA-A-201ENST00000376802 LINC00337Q8N6G1 96 aa9.85□□□□□ -0.83
HLA-A-201ENST00000376802 KRTAP9-6A0A140TA67 174 aa9.84□□□□□ -0.83
HLA-A-201ENST00000376802 BOD1L2Q8IYS8 172 aa9.84□□□□□ -0.83
HLA-A-201ENST00000376802 SMCR5Q8TEV8 140 aa9.84□□□□□ -0.83
HLA-A-201ENST00000376802 IFI27L1Q96BM0 104 aa9.84□□□□□ -0.83
HLA-A-201ENST00000376802 MAP1LC3CQ9BXW4 147 aa9.84□□□□□ -0.83
HLA-A-201ENST00000376802 NCR3O14931 201 aa9.83□□□□□ -0.84
HLA-A-201ENST00000376802 C3orf79P0CE67 100 aa9.83□□□□□ -0.84
HLA-A-201ENST00000376802 TRAV12-1A0A0B4J245 112 aa9.82□□□□□ -0.84
HLA-A-201ENST00000376802 SYS1-DBNDD2H3BUS1 97 aa9.82□□□□□ -0.84
HLA-A-201ENST00000376802 SMIM6P0DI80 62 aa9.82□□□□□ -0.84
HLA-A-201ENST00000376802 KRTDAPP60985 99 aa9.82□□□□□ -0.84
HLA-A-201ENST00000376802 JOSD1Q15040 202 aaPredicted RBP9.82□□□□□ -0.84
HLA-A-201ENST00000376802 PET117Q6UWS5 81 aa9.82□□□□□ -0.84
HLA-A-201ENST00000376802 MIR7-3HGQ8N6C7 128 aa9.82□□□□□ -0.84
HLA-A-201ENST00000376802 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
HLA-A-201ENST00000376802 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
HLA-A-201ENST00000376802 KRTAP4-1Q9BYQ7 146 aa9.82□□□□□ -0.84
HLA-A-201ENST00000376802 SPINK1P00995 79 aa9.81□□□□□ -0.84
HLA-A-201ENST00000376802 TRBV10-3A0A0K0K1G6 114 aa9.8□□□□□ -0.84
HLA-A-201ENST00000376802 C20orf202A1L168 122 aa9.8□□□□□ -0.84
HLA-A-201ENST00000376802 PYY3Q5JQD4 70 aa9.8□□□□□ -0.84
HLA-A-201ENST00000376802 ETDCA0A1B0GVM5 59 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms