RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 HIGD2AQ9BW72 106 aa10.7□□□□□ -0.7
HDAC6-202ENST00000376610 C18orf32Q8TCD1 76 aa10.69□□□□□ -0.7
HDAC6-202ENST00000376610 TRAPPC1Q9Y5R8 145 aa10.69□□□□□ -0.7
HDAC6-202ENST00000376610 C11orf86A6NJI1 115 aa10.68□□□□□ -0.7
HDAC6-202ENST00000376610 LINC00158P58513 81 aa10.68□□□□□ -0.7
HDAC6-202ENST00000376610 FAT4Q6V0I7 4981 aa10.67□□□□□ -0.7
HDAC6-202ENST00000376610 MUC17Q685J3 4493 aa10.67□□□□□ -0.7
HDAC6-202ENST00000376610 PMCHL1Q16048 86 aa10.67□□□□□ -0.7
HDAC6-202ENST00000376610 COMMD7Q86VX2 200 aa10.67□□□□□ -0.7
HDAC6-202ENST00000376610 SPAG11AQ6PDA7 123 aa10.66□□□□□ -0.7
HDAC6-202ENST00000376610 C3orf22Q8N5N4 141 aa10.66□□□□□ -0.7
HDAC6-202ENST00000376610 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
HDAC6-202ENST00000376610 ZNF706Q9Y5V0 76 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-202ENST00000376610 ATP6V1G1O75348 118 aa10.65□□□□□ -0.7
HDAC6-202ENST00000376610 CHTOPQ9Y3Y2 248 aaKnown RBP10.65□□□□□ -0.7
HDAC6-202ENST00000376610 C4orf48Q5BLP8 95 aa10.64□□□□□ -0.71
HDAC6-202ENST00000376610 Q8NDZ9 215 aa10.64□□□□□ -0.71
HDAC6-202ENST00000376610 A0A0U1RRA0 63 aa10.63□□□□□ -0.71
HDAC6-202ENST00000376610 C10orf91Q5T1B1 145 aa10.63□□□□□ -0.71
HDAC6-202ENST00000376610 PPDPFQ9H3Y8 114 aa10.63□□□□□ -0.71
HDAC6-202ENST00000376610 IFITM2Q01629 132 aa10.62□□□□□ -0.71
HDAC6-202ENST00000376610 SPRR4Q96PI1 79 aa10.62□□□□□ -0.71
HDAC6-202ENST00000376610 PRYO14603 147 aa10.6□□□□□ -0.71
HDAC6-202ENST00000376610 MEIG1Q5JSS6 88 aa10.6□□□□□ -0.71
HDAC6-202ENST00000376610 KRTAP9-2Q9BYQ4 174 aa10.6□□□□□ -0.71
HDAC6-202ENST00000376610 TMEM223A0PJW6 202 aa10.59□□□□□ -0.71
HDAC6-202ENST00000376610 LCE2AQ5TA79 106 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-202ENST00000376610 BOD1L2Q8IYS8 172 aa10.59□□□□□ -0.71
HDAC6-202ENST00000376610 FP248Q71RG6 208 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-202ENST00000376610 TRAV12-1A0A0B4J245 112 aa10.57□□□□□ -0.72
HDAC6-202ENST00000376610 SMIM13P0DJ93 91 aa10.57□□□□□ -0.72
HDAC6-202ENST00000376610 S100A12P80511 92 aa10.57□□□□□ -0.72
HDAC6-202ENST00000376610 ETDCA0A1B0GVM5 59 aa10.56□□□□□ -0.72
HDAC6-202ENST00000376610 LINC00587B1AMM8 73 aa10.56□□□□□ -0.72
HDAC6-202ENST00000376610 HERV-K104P63124 156 aa10.56□□□□□ -0.72
HDAC6-202ENST00000376610 LINC00337Q8N6G1 96 aa10.56□□□□□ -0.72
HDAC6-202ENST00000376610 NCR3O14931 201 aa10.55□□□□□ -0.72
HDAC6-202ENST00000376610 MIR7-3HGQ8N6C7 128 aa10.55□□□□□ -0.72
HDAC6-202ENST00000376610 Q8NBF4 154 aa10.55□□□□□ -0.72
HDAC6-202ENST00000376610 IFI27L1Q96BM0 104 aa10.55□□□□□ -0.72
HDAC6-202ENST00000376610 CHCHD1Q96BP2 118 aaKnown RBP10.55□□□□□ -0.72
HDAC6-202ENST00000376610 MAP1LC3CQ9BXW4 147 aa10.54□□□□□ -0.72
HDAC6-202ENST00000376610 KCNQ1DNQ9H478 68 aa10.54□□□□□ -0.72
HDAC6-202ENST00000376610 APOC3P02656 99 aa10.53□□□□□ -0.72
HDAC6-202ENST00000376610 NDUFA5Q16718 116 aa10.53□□□□□ -0.72
HDAC6-202ENST00000376610 DAND5Q8N907 189 aa10.53□□□□□ -0.72
HDAC6-202ENST00000376610 SMCR5Q8TEV8 140 aa10.53□□□□□ -0.72
HDAC6-202ENST00000376610 SNAPINO95295 136 aa10.52□□□□□ -0.73
HDAC6-202ENST00000376610 SPINK1P00995 79 aa10.51□□□□□ -0.73
HDAC6-202ENST00000376610 SPRR1AP35321 89 aa10.51□□□□□ -0.73
HDAC6-202ENST00000376610 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
HDAC6-202ENST00000376610 TRBV10-3A0A0K0K1G6 114 aa10.5□□□□□ -0.73
HDAC6-202ENST00000376610 MYMXA0A1B0GTQ4 84 aa10.5□□□□□ -0.73
HDAC6-202ENST00000376610 SVBPQ8N300 66 aa10.5□□□□□ -0.73
HDAC6-202ENST00000376610 GAGE2AQ6NT46 116 aa10.48□□□□□ -0.73
HDAC6-202ENST00000376610 KRTAP4-16G5E9R7 235 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-202ENST00000376610 HSBP1O75506 76 aa10.47□□□□□ -0.73
HDAC6-202ENST00000376610 LINC00483Q53H64 154 aa10.47□□□□□ -0.73
HDAC6-202ENST00000376610 H0Y8G0 127 aa10.46□□□□□ -0.73
HDAC6-202ENST00000376610 KRTAP13-3Q3SY46 172 aa10.46□□□□□ -0.73
HDAC6-202ENST00000376610 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
HDAC6-202ENST00000376610 IGLV9-49A0A0B4J1Y8 123 aa10.44□□□□□ -0.74
HDAC6-202ENST00000376610 DDTP30046 118 aa10.44□□□□□ -0.74
HDAC6-202ENST00000376610 B5MCH6 92 aa10.43□□□□□ -0.74
HDAC6-202ENST00000376610 MOBPQ13875 183 aa10.43□□□□□ -0.74
HDAC6-202ENST00000376610 MIEN1Q9BRT3 115 aa10.43□□□□□ -0.74
HDAC6-202ENST00000376610 TRBV10-2A0A0K0K1G8 114 aa10.42□□□□□ -0.74
HDAC6-202ENST00000376610 ASB16-AS1Q495Z4 193 aa10.42□□□□□ -0.74
HDAC6-202ENST00000376610 SSBP3-AS1Q7Z2R9 100 aa10.42□□□□□ -0.74
HDAC6-202ENST00000376610 LEPROTO15243 131 aa10.41□□□□□ -0.74
HDAC6-202ENST00000376610 SEC61BP60468 96 aaKnown RBP10.41□□□□□ -0.74
HDAC6-202ENST00000376610 RPS29P62273 56 aaKnown RBP10.41□□□□□ -0.74
HDAC6-202ENST00000376610 LOC107984156A0A0G2JMH3 177 aa10.4□□□□□ -0.74
HDAC6-202ENST00000376610 S100A7L2Q5SY68 101 aa10.4□□□□□ -0.74
HDAC6-202ENST00000376610 ARL17AQ8IVW1 177 aa10.4□□□□□ -0.74
HDAC6-202ENST00000376610 SPANXB1Q9NS25 103 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-202ENST00000376610 LEPROTL1O95214 131 aa10.39□□□□□ -0.75
HDAC6-202ENST00000376610 PLNP26678 52 aa10.39□□□□□ -0.75
HDAC6-202ENST00000376610 HERVK_113P61574 105 aa10.39□□□□□ -0.75
HDAC6-202ENST00000376610 Q6ZRX8 168 aa10.39□□□□□ -0.75
HDAC6-202ENST00000376610 SLC25A20O43772 301 aa10.38□□□□□ -0.75
HDAC6-202ENST00000376610 ERC2-IT1O76042 136 aa10.38□□□□□ -0.75
HDAC6-202ENST00000376610 NMUP48645 174 aa10.38□□□□□ -0.75
HDAC6-202ENST00000376610 LINC01547P58512 204 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-202ENST00000376610 TSPEAR-AS2P59090 65 aa10.38□□□□□ -0.75
HDAC6-202ENST00000376610 JOSD1Q15040 202 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-202ENST00000376610 YPEL4Q96NS1 127 aa10.38□□□□□ -0.75
HDAC6-202ENST00000376610 J3QQQ9 107 aa10.37□□□□□ -0.75
HDAC6-202ENST00000376610 LGALS3P17931 250 aaKnown RBP10.36□□□□□ -0.75
HDAC6-202ENST00000376610 Q8N377 158 aa10.36□□□□□ -0.75
HDAC6-202ENST00000376610 Q9BRP9 147 aa10.36□□□□□ -0.75
HDAC6-202ENST00000376610 C9orf153Q5TBE3 101 aa10.35□□□□□ -0.75
HDAC6-202ENST00000376610 HSPB8Q9UJY1 196 aa10.35□□□□□ -0.75
HDAC6-202ENST00000376610 TRAV23DV6A0A075B6W5 121 aa10.34□□□□□ -0.75
HDAC6-202ENST00000376610 KRTAP9-6A0A140TA67 174 aa10.34□□□□□ -0.75
HDAC6-202ENST00000376610 DPM2O94777 84 aa10.34□□□□□ -0.75
HDAC6-202ENST00000376610 NDUFC2O95298 119 aa10.34□□□□□ -0.75
HDAC6-202ENST00000376610 IGLV6-57P01721 117 aa10.33□□□□□ -0.76
HDAC6-202ENST00000376610 CBY1Q9Y3M2 126 aa10.32□□□□□ -0.76
HDAC6-202ENST00000376610 SERF1AO75920 110 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms