RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 FAM19A5Q7Z5A7 132 aaPredicted RBP7.1□□□□□ -1.27
HSPG2-202ENST00000374676 MIR7-3HGQ8N6C7 128 aa7.1□□□□□ -1.27
HSPG2-202ENST00000374676 TP73-AS1Q9UF72 201 aa7.1□□□□□ -1.27
HSPG2-202ENST00000374676 IGLV5-37A0A075B6J1 123 aa7.09□□□□□ -1.27
HSPG2-202ENST00000374676 LOC107984156A0A0G2JMH3 177 aa7.09□□□□□ -1.27
HSPG2-202ENST00000374676 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
HSPG2-202ENST00000374676 PHF5AQ7RTV0 110 aaKnown RBP7.09□□□□□ -1.27
HSPG2-202ENST00000374676 ARL17AQ8IVW1 177 aa7.09□□□□□ -1.27
HSPG2-202ENST00000374676 TTTY13Q9BZ97 58 aa7.09□□□□□ -1.27
HSPG2-202ENST00000374676 C22orf24Q9Y442 160 aa7.09□□□□□ -1.27
HSPG2-202ENST00000374676 M0QXV9 152 aa7.08□□□□□ -1.28
HSPG2-202ENST00000374676 TIMM17BO60830 172 aa7.08□□□□□ -1.28
HSPG2-202ENST00000374676 RPL24P83731 157 aaKnown RBP7.08□□□□□ -1.28
HSPG2-202ENST00000374676 LBHQ53QV2 105 aaPredicted RBP7.08□□□□□ -1.28
HSPG2-202ENST00000374676 VPREB1P12018 145 aa7.07□□□□□ -1.28
HSPG2-202ENST00000374676 KRTAP10-4P60372 401 aaPredicted RBP7.07□□□□□ -1.28
HSPG2-202ENST00000374676 RPL37AP61513 92 aaKnown RBP7.07□□□□□ -1.28
HSPG2-202ENST00000374676 ADAMTSL4-AS1Q5T5F5 129 aa7.07□□□□□ -1.28
HSPG2-202ENST00000374676 PCP2Q8IVA1 136 aa7.07□□□□□ -1.28
HSPG2-202ENST00000374676 KRTAP4-5Q9BYR2 181 aa7.07□□□□□ -1.28
HSPG2-202ENST00000374676 MRPL55Q7Z7F7 128 aaKnown RBP7.06□□□□□ -1.28
HSPG2-202ENST00000374676 NKAPP1Q8N9T2 125 aa7.06□□□□□ -1.28
HSPG2-202ENST00000374676 LITAFQ99732 161 aa7.06□□□□□ -1.28
HSPG2-202ENST00000374676 ABCA13Q86UQ4 5058 aa7.05□□□□□ -1.28
HSPG2-202ENST00000374676 SCGB1D4Q6XE38 83 aa7.05□□□□□ -1.28
HSPG2-202ENST00000374676 DAND5Q8N907 189 aa7.05□□□□□ -1.28
HSPG2-202ENST00000374676 LINC00167Q96N53 147 aa7.05□□□□□ -1.28
HSPG2-202ENST00000374676 UBE2BP63146 152 aa7.04□□□□□ -1.28
HSPG2-202ENST00000374676 PYY3Q5JQD4 70 aa7.04□□□□□ -1.28
HSPG2-202ENST00000374676 BOD1L2Q8IYS8 172 aa7.04□□□□□ -1.28
HSPG2-202ENST00000374676 Q8NDZ9 215 aa7.04□□□□□ -1.28
HSPG2-202ENST00000374676 FLG2Q5D862 2391 aaPredicted RBP7.04□□□□□ -1.28
HSPG2-202ENST00000374676 PKHD1L1Q86WI1 4243 aa7.03□□□□□ -1.28
HSPG2-202ENST00000374676 TMEM238C9JI98 176 aa7.03□□□□□ -1.28
HSPG2-202ENST00000374676 PRR3P79522 188 aaKnown RBP7.03□□□□□ -1.28
HSPG2-202ENST00000374676 KRTAP11-1Q8IUC1 163 aa7.03□□□□□ -1.28
HSPG2-202ENST00000374676 MIEN1Q9BRT3 115 aa7.03□□□□□ -1.28
HSPG2-202ENST00000374676 PSORS1C2Q9UIG4 136 aa7.03□□□□□ -1.28
HSPG2-202ENST00000374676 M0R378 163 aa7.02□□□□□ -1.29
HSPG2-202ENST00000374676 DLEU1O43261 78 aa7.02□□□□□ -1.29
HSPG2-202ENST00000374676 NDUFC2O95298 119 aa7.02□□□□□ -1.29
HSPG2-202ENST00000374676 COX8AP10176 69 aa7.02□□□□□ -1.29
HSPG2-202ENST00000374676 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
HSPG2-202ENST00000374676 Q6ZVH6 145 aa7.02□□□□□ -1.29
HSPG2-202ENST00000374676 LINC00308Q8TCZ7 52 aa7.02□□□□□ -1.29
HSPG2-202ENST00000374676 VAMP8Q9BV40 100 aa7.02□□□□□ -1.29
HSPG2-202ENST00000374676 SPANXDQ9BXN6 97 aa7.02□□□□□ -1.29
HSPG2-202ENST00000374676 SPANXCQ9NY87 97 aa7.02□□□□□ -1.29
HSPG2-202ENST00000374676 TRBV10-2A0A0K0K1G8 114 aa7.01□□□□□ -1.29
HSPG2-202ENST00000374676 GAGE10A6NGK3 116 aa7.01□□□□□ -1.29
HSPG2-202ENST00000374676 SPATA45Q537H7 98 aa7.01□□□□□ -1.29
HSPG2-202ENST00000374676 PPDPFQ9H3Y8 114 aa7.01□□□□□ -1.29
HSPG2-202ENST00000374676 PAM16Q9Y3D7 125 aa7.01□□□□□ -1.29
HSPG2-202ENST00000374676 IGLV1-50A0A075B6I6 118 aa7□□□□□ -1.29
HSPG2-202ENST00000374676 EIF4EBP3O60516 100 aaPredicted RBP7□□□□□ -1.29
HSPG2-202ENST00000374676 INAFM2P0DMQ5 153 aa7□□□□□ -1.29
HSPG2-202ENST00000374676 IFITM1P13164 125 aa7□□□□□ -1.29
HSPG2-202ENST00000374676 C1orf137Q5JT78 98 aa7□□□□□ -1.29
HSPG2-202ENST00000374676 COPS9Q8WXC6 57 aa7□□□□□ -1.29
HSPG2-202ENST00000374676 RPL37AP8A6NKH3 93 aa6.99□□□□□ -1.29
HSPG2-202ENST00000374676 NPC2P61916 151 aa6.99□□□□□ -1.29
HSPG2-202ENST00000374676 SPANXB1Q9NS25 103 aaPredicted RBP6.99□□□□□ -1.29
HSPG2-202ENST00000374676 SRSF9Q13242 221 aaKnown RBP eCLIP6.98□□□□□ -1.29
HSPG2-202ENST00000374676 C14orf144Q96I85 54 aa6.98□□□□□ -1.29
HSPG2-202ENST00000374676 IGKV2-28A0A075B6P5 120 aa6.97□□□□□ -1.29
HSPG2-202ENST00000374676 NCR3O14931 201 aa6.97□□□□□ -1.29
HSPG2-202ENST00000374676 IGKV2D-28P01615 120 aa6.97□□□□□ -1.29
HSPG2-202ENST00000374676 IGLV7-43P04211 117 aa6.97□□□□□ -1.29
HSPG2-202ENST00000374676 HNRNPA3P51991 378 aaKnown RBP6.97□□□□□ -1.29
HSPG2-202ENST00000374676 SLC25A34Q6PIV7 304 aa6.97□□□□□ -1.29
HSPG2-202ENST00000374676 MUSTN1Q8IVN3 82 aa6.97□□□□□ -1.29
HSPG2-202ENST00000374676 SPINK6Q6UWN8 80 aa6.96□□□□□ -1.3
HSPG2-202ENST00000374676 LINC00518Q8N0U6 118 aa6.96□□□□□ -1.3
HSPG2-202ENST00000374676 HIGD1BQ9P298 99 aa6.96□□□□□ -1.3
HSPG2-202ENST00000374676 TRBV10-3A0A0K0K1G6 114 aa6.95□□□□□ -1.3
HSPG2-202ENST00000374676 BCE1O60756 84 aa6.95□□□□□ -1.3
HSPG2-202ENST00000374676 KCNQ1DNQ9H478 68 aa6.95□□□□□ -1.3
HSPG2-202ENST00000374676 MYCBP2O75592 4640 aa6.94□□□□□ -1.3
HSPG2-202ENST00000374676 FAT3Q8TDW7 4589 aa6.94□□□□□ -1.3
HSPG2-202ENST00000374676 PRYO14603 147 aa6.94□□□□□ -1.3
HSPG2-202ENST00000374676 IGLV6-57P01721 117 aa6.94□□□□□ -1.3
HSPG2-202ENST00000374676 DDTP30046 118 aa6.94□□□□□ -1.3
HSPG2-202ENST00000374676 S100A12P80511 92 aa6.94□□□□□ -1.3
HSPG2-202ENST00000374676 REG3GQ6UW15 175 aa6.94□□□□□ -1.3
HSPG2-202ENST00000374676 TMEM126AQ9H061 195 aa6.94□□□□□ -1.3
HSPG2-202ENST00000374676 PCLOQ9Y6V0 5065 aa6.94□□□□□ -1.3
HSPG2-202ENST00000374676 LOC105371267A0A1B0GV96 52 aa6.93□□□□□ -1.3
HSPG2-202ENST00000374676 ZNF861PO60384 105 aa6.93□□□□□ -1.3
HSPG2-202ENST00000374676 S100A7L2Q5SY68 101 aa6.93□□□□□ -1.3
HSPG2-202ENST00000374676 LRP1Q07954 4544 aaKnown RBP6.93□□□□□ -1.3
HSPG2-202ENST00000374676 SPRR1AP35321 89 aa6.92□□□□□ -1.3
HSPG2-202ENST00000374676 SMIM6P0DI80 62 aa6.91□□□□□ -1.3
HSPG2-202ENST00000374676 RPL28P46779 137 aaKnown RBP6.91□□□□□ -1.3
HSPG2-202ENST00000374676 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
HSPG2-202ENST00000374676 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
HSPG2-202ENST00000374676 LINC00337Q8N6G1 96 aa6.91□□□□□ -1.3
HSPG2-202ENST00000374676 DIRC1Q969H9 104 aa6.91□□□□□ -1.3
HSPG2-202ENST00000374676 HIST1H4GQ99525 98 aa6.91□□□□□ -1.3
HSPG2-202ENST00000374676 CBY1Q9Y3M2 126 aa6.91□□□□□ -1.3
HSPG2-202ENST00000374676 KRTAP4-16G5E9R7 235 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms