RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 M0QXV9 152 aa9.38□□□□□ -0.91
HSPG2-201ENST00000374673 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
HSPG2-201ENST00000374673 IGLV5-37A0A075B6J1 123 aa9.37□□□□□ -0.91
HSPG2-201ENST00000374673 PLA2G1BP04054 148 aaKnown RBP9.37□□□□□ -0.91
HSPG2-201ENST00000374673 TP73-AS1Q9UF72 201 aa9.37□□□□□ -0.91
HSPG2-201ENST00000374673 RPL37AP61513 92 aaKnown RBP9.36□□□□□ -0.91
HSPG2-201ENST00000374673 C22orf24Q9Y442 160 aa9.36□□□□□ -0.91
HSPG2-201ENST00000374673 LOC107984156A0A0G2JMH3 177 aa9.35□□□□□ -0.91
HSPG2-201ENST00000374673 TIMM17BO60830 172 aa9.35□□□□□ -0.91
HSPG2-201ENST00000374673 KRTAP10-4P60372 401 aaPredicted RBP9.35□□□□□ -0.91
HSPG2-201ENST00000374673 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
HSPG2-201ENST00000374673 ARL17AQ8IVW1 177 aa9.35□□□□□ -0.91
HSPG2-201ENST00000374673 KRTAP4-5Q9BYR2 181 aa9.35□□□□□ -0.91
HSPG2-201ENST00000374673 FAT1Q14517 4588 aa9.35□□□□□ -0.91
HSPG2-201ENST00000374673 VPREB1P12018 145 aa9.34□□□□□ -0.91
HSPG2-201ENST00000374673 RPL24P83731 157 aaKnown RBP9.34□□□□□ -0.91
HSPG2-201ENST00000374673 DAND5Q8N907 189 aa9.34□□□□□ -0.91
HSPG2-201ENST00000374673 LITAFQ99732 161 aa9.34□□□□□ -0.91
HSPG2-201ENST00000374673 LBHQ53QV2 105 aaPredicted RBP9.33□□□□□ -0.92
HSPG2-201ENST00000374673 ADAMTSL4-AS1Q5T5F5 129 aa9.33□□□□□ -0.92
HSPG2-201ENST00000374673 MRPL55Q7Z7F7 128 aaKnown RBP9.33□□□□□ -0.92
HSPG2-201ENST00000374673 NKAPP1Q8N9T2 125 aa9.33□□□□□ -0.92
HSPG2-201ENST00000374673 PYY3Q5JQD4 70 aa9.32□□□□□ -0.92
HSPG2-201ENST00000374673 SCGB1D4Q6XE38 83 aa9.32□□□□□ -0.92
HSPG2-201ENST00000374673 Q8NDZ9 215 aa9.32□□□□□ -0.92
HSPG2-201ENST00000374673 UBE2BP63146 152 aa9.31□□□□□ -0.92
HSPG2-201ENST00000374673 PRR3P79522 188 aaKnown RBP9.31□□□□□ -0.92
HSPG2-201ENST00000374673 BOD1L2Q8IYS8 172 aa9.31□□□□□ -0.92
HSPG2-201ENST00000374673 TMEM238C9JI98 176 aa9.3□□□□□ -0.92
HSPG2-201ENST00000374673 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
HSPG2-201ENST00000374673 LINC00167Q96N53 147 aa9.3□□□□□ -0.92
HSPG2-201ENST00000374673 MIEN1Q9BRT3 115 aa9.3□□□□□ -0.92
HSPG2-201ENST00000374673 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
HSPG2-201ENST00000374673 VAMP8Q9BV40 100 aa9.29□□□□□ -0.92
HSPG2-201ENST00000374673 SPANXDQ9BXN6 97 aa9.29□□□□□ -0.92
HSPG2-201ENST00000374673 SPANXCQ9NY87 97 aa9.29□□□□□ -0.92
HSPG2-201ENST00000374673 PSORS1C2Q9UIG4 136 aa9.29□□□□□ -0.92
HSPG2-201ENST00000374673 VPS13BQ7Z7G8 4022 aa9.28□□□□□ -0.92
HSPG2-201ENST00000374673 COX8AP10176 69 aa9.28□□□□□ -0.92
HSPG2-201ENST00000374673 SPATA45Q537H7 98 aa9.28□□□□□ -0.92
HSPG2-201ENST00000374673 PAM16Q9Y3D7 125 aa9.28□□□□□ -0.92
HSPG2-201ENST00000374673 NDUFC2O95298 119 aa9.27□□□□□ -0.93
HSPG2-201ENST00000374673 NPC2P61916 151 aa9.27□□□□□ -0.93
HSPG2-201ENST00000374673 LINC00308Q8TCZ7 52 aa9.27□□□□□ -0.93
HSPG2-201ENST00000374673 GAGE10A6NGK3 116 aa9.26□□□□□ -0.93
HSPG2-201ENST00000374673 M0R378 163 aa9.26□□□□□ -0.93
HSPG2-201ENST00000374673 EIF4EBP3O60516 100 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-201ENST00000374673 Q6ZVH6 145 aa9.26□□□□□ -0.93
HSPG2-201ENST00000374673 IGLV1-50A0A075B6I6 118 aa9.25□□□□□ -0.93
HSPG2-201ENST00000374673 RPL37AP8A6NKH3 93 aa9.25□□□□□ -0.93
HSPG2-201ENST00000374673 DLEU1O43261 78 aa9.25□□□□□ -0.93
HSPG2-201ENST00000374673 C1orf137Q5JT78 98 aa9.25□□□□□ -0.93
HSPG2-201ENST00000374673 PPDPFQ9H3Y8 114 aa9.25□□□□□ -0.93
HSPG2-201ENST00000374673 TRBV10-2A0A0K0K1G8 114 aa9.24□□□□□ -0.93
HSPG2-201ENST00000374673 NCR3O14931 201 aa9.24□□□□□ -0.93
HSPG2-201ENST00000374673 INAFM2P0DMQ5 153 aa9.24□□□□□ -0.93
HSPG2-201ENST00000374673 IFITM1P13164 125 aa9.24□□□□□ -0.93
HSPG2-201ENST00000374673 HNRNPA3P51991 378 aaKnown RBP9.24□□□□□ -0.93
HSPG2-201ENST00000374673 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
HSPG2-201ENST00000374673 IGKV2-28A0A075B6P5 120 aa9.23□□□□□ -0.93
HSPG2-201ENST00000374673 IGKV2D-28P01615 120 aa9.23□□□□□ -0.93
HSPG2-201ENST00000374673 COPS9Q8WXC6 57 aa9.23□□□□□ -0.93
HSPG2-201ENST00000374673 C14orf144Q96I85 54 aa9.22□□□□□ -0.93
HSPG2-201ENST00000374673 IGLV7-43P04211 117 aa9.21□□□□□ -0.94
HSPG2-201ENST00000374673 ABCA13Q86UQ4 5058 aa9.21□□□□□ -0.94
HSPG2-201ENST00000374673 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.94
HSPG2-201ENST00000374673 SLC25A34Q6PIV7 304 aa9.2□□□□□ -0.94
HSPG2-201ENST00000374673 MUSTN1Q8IVN3 82 aa9.2□□□□□ -0.94
HSPG2-201ENST00000374673 BCE1O60756 84 aa9.19□□□□□ -0.94
HSPG2-201ENST00000374673 SPINK6Q6UWN8 80 aa9.19□□□□□ -0.94
HSPG2-201ENST00000374673 TRBV10-3A0A0K0K1G6 114 aa9.18□□□□□ -0.94
HSPG2-201ENST00000374673 PRYO14603 147 aa9.18□□□□□ -0.94
HSPG2-201ENST00000374673 REG3GQ6UW15 175 aa9.18□□□□□ -0.94
HSPG2-201ENST00000374673 TMEM126AQ9H061 195 aa9.18□□□□□ -0.94
HSPG2-201ENST00000374673 KCNQ1DNQ9H478 68 aa9.18□□□□□ -0.94
HSPG2-201ENST00000374673 HIGD1BQ9P298 99 aa9.18□□□□□ -0.94
HSPG2-201ENST00000374673 PKHD1L1Q86WI1 4243 aa9.17□□□□□ -0.94
HSPG2-201ENST00000374673 IGLV6-57P01721 117 aa9.17□□□□□ -0.94
HSPG2-201ENST00000374673 DDTP30046 118 aa9.17□□□□□ -0.94
HSPG2-201ENST00000374673 S100A12P80511 92 aa9.17□□□□□ -0.94
HSPG2-201ENST00000374673 LINC00518Q8N0U6 118 aa9.17□□□□□ -0.94
HSPG2-201ENST00000374673 LOC105371267A0A1B0GV96 52 aa9.16□□□□□ -0.94
HSPG2-201ENST00000374673 S100A7L2Q5SY68 101 aa9.16□□□□□ -0.94
HSPG2-201ENST00000374673 SRRM2Q9UQ35 2752 aaKnown RBP9.15□□□□□ -0.94
HSPG2-201ENST00000374673 ZNF861PO60384 105 aa9.15□□□□□ -0.94
HSPG2-201ENST00000374673 SMIM6P0DI80 62 aa9.15□□□□□ -0.94
HSPG2-201ENST00000374673 SPRR1AP35321 89 aa9.15□□□□□ -0.94
HSPG2-201ENST00000374673 C2orf91Q6ZV80 131 aa9.15□□□□□ -0.94
HSPG2-201ENST00000374673 HIST1H4GQ99525 98 aa9.14□□□□□ -0.95
HSPG2-201ENST00000374673 RPL28P46779 137 aaKnown RBP9.13□□□□□ -0.95
HSPG2-201ENST00000374673 FAM19A1Q7Z5A9 133 aa9.13□□□□□ -0.95
HSPG2-201ENST00000374673 KRTAP13-1Q8IUC0 172 aa9.13□□□□□ -0.95
HSPG2-201ENST00000374673 LINC00337Q8N6G1 96 aa9.13□□□□□ -0.95
HSPG2-201ENST00000374673 UBE2AP49459 152 aa9.12□□□□□ -0.95
HSPG2-201ENST00000374673 DIRC1Q969H9 104 aa9.12□□□□□ -0.95
HSPG2-201ENST00000374673 CBY1Q9Y3M2 126 aa9.12□□□□□ -0.95
HSPG2-201ENST00000374673 TRAV23DV6A0A075B6W5 121 aa9.11□□□□□ -0.95
HSPG2-201ENST00000374673 KRTAP4-16G5E9R7 235 aaPredicted RBP9.11□□□□□ -0.95
HSPG2-201ENST00000374673 H0Y9J4 135 aa9.11□□□□□ -0.95
HSPG2-201ENST00000374673 OR13C6PQ8NH95 151 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms