RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 H0YGX0 51 aa10.69□□□□□ -0.7
CNKSR1-202ENST00000374253 LYSTQ99698 3801 aa10.69□□□□□ -0.7
CNKSR1-202ENST00000374253 H3BNG1 76 aa10.68□□□□□ -0.7
CNKSR1-202ENST00000374253 SNCGO76070 127 aa10.68□□□□□ -0.7
CNKSR1-202ENST00000374253 RPL18AQ02543 176 aaKnown RBP10.68□□□□□ -0.7
CNKSR1-202ENST00000374253 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
CNKSR1-202ENST00000374253 ZNF561-AS1K7EIQ3 104 aa10.67□□□□□ -0.7
CNKSR1-202ENST00000374253 NDUFC2O95298 119 aa10.67□□□□□ -0.7
CNKSR1-202ENST00000374253 C6orf99Q4VX62 202 aa10.67□□□□□ -0.7
CNKSR1-202ENST00000374253 TMEM126AQ9H061 195 aa10.67□□□□□ -0.7
CNKSR1-202ENST00000374253 IGKV2D-24A0A075B6R9 120 aa10.66□□□□□ -0.7
CNKSR1-202ENST00000374253 KRTAP26-1Q6PEX3 210 aa10.66□□□□□ -0.7
CNKSR1-202ENST00000374253 COL7A1Q02388 2944 aa10.66□□□□□ -0.7
CNKSR1-202ENST00000374253 STAB2Q8WWQ8 2551 aa10.66□□□□□ -0.7
CNKSR1-202ENST00000374253 CAMK2N2Q96S95 79 aa10.66□□□□□ -0.7
CNKSR1-202ENST00000374253 C14orf132Q9NPU4 83 aa10.65□□□□□ -0.7
CNKSR1-202ENST00000374253 GAGE2AQ6NT46 116 aa10.64□□□□□ -0.71
CNKSR1-202ENST00000374253 K7EIL1 84 aa10.64□□□□□ -0.71
CNKSR1-202ENST00000374253 C15orf56Q8N910 161 aa10.64□□□□□ -0.71
CNKSR1-202ENST00000374253 Q6ZRU5 148 aa10.63□□□□□ -0.71
CNKSR1-202ENST00000374253 C1orf43Q9BWL3 253 aa10.63□□□□□ -0.71
CNKSR1-202ENST00000374253 SMCR5Q8TEV8 140 aa10.62□□□□□ -0.71
CNKSR1-202ENST00000374253 GAGE2BQ13066 116 aa10.61□□□□□ -0.71
CNKSR1-202ENST00000374253 GAGE2EQ4V326 116 aa10.61□□□□□ -0.71
CNKSR1-202ENST00000374253 GAGE2DQ9UEU5 116 aa10.61□□□□□ -0.71
CNKSR1-202ENST00000374253 FAM240AA0A1B0GVK7 77 aa10.61□□□□□ -0.71
CNKSR1-202ENST00000374253 Q8N814 137 aa10.61□□□□□ -0.71
CNKSR1-202ENST00000374253 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
CNKSR1-202ENST00000374253 ORMDL1Q9P0S3 153 aa10.6□□□□□ -0.71
CNKSR1-202ENST00000374253 TRBV10-3A0A0K0K1G6 114 aa10.59□□□□□ -0.71
CNKSR1-202ENST00000374253 GVQW2A0A096LPI5 108 aaPredicted RBP10.59□□□□□ -0.71
CNKSR1-202ENST00000374253 INAFM2P0DMQ5 153 aa10.58□□□□□ -0.72
CNKSR1-202ENST00000374253 LINC00588Q9Y4M8 146 aa10.58□□□□□ -0.72
CNKSR1-202ENST00000374253 TENM2Q9NT68 2774 aa10.58□□□□□ -0.72
CNKSR1-202ENST00000374253 CASC10Q5T4H9 136 aa10.57□□□□□ -0.72
CNKSR1-202ENST00000374253 TM2D3Q9BRN9 247 aa10.57□□□□□ -0.72
CNKSR1-202ENST00000374253 TRAV10A0A0B4J240 114 aa10.56□□□□□ -0.72
CNKSR1-202ENST00000374253 DNAH10Q8IVF4 4471 aa10.56□□□□□ -0.72
CNKSR1-202ENST00000374253 IGLV6-57P01721 117 aa10.56□□□□□ -0.72
CNKSR1-202ENST00000374253 DNAH1Q9P2D7 4330 aa10.55□□□□□ -0.72
CNKSR1-202ENST00000374253 Q6ZRP5 223 aa10.54□□□□□ -0.72
CNKSR1-202ENST00000374253 LINC00575Q6W349 94 aa10.54□□□□□ -0.72
CNKSR1-202ENST00000374253 ACYP1P07311 99 aa10.53□□□□□ -0.72
CNKSR1-202ENST00000374253 DNAH10OSP0CZ25 163 aa10.53□□□□□ -0.72
CNKSR1-202ENST00000374253 ANAPC13Q9BS18 74 aa10.53□□□□□ -0.72
CNKSR1-202ENST00000374253 TRAV23DV6A0A075B6W5 121 aa10.52□□□□□ -0.72
CNKSR1-202ENST00000374253 LINC00167Q96N53 147 aa10.52□□□□□ -0.72
CNKSR1-202ENST00000374253 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.73
CNKSR1-202ENST00000374253 VPREB1P12018 145 aa10.52□□□□□ -0.73
CNKSR1-202ENST00000374253 MUC7Q8TAX7 377 aa10.52□□□□□ -0.73
CNKSR1-202ENST00000374253 OBSCN-AS1Q96MR7 158 aa10.52□□□□□ -0.73
CNKSR1-202ENST00000374253 DNAH9Q9NYC9 4486 aa10.51□□□□□ -0.73
CNKSR1-202ENST00000374253 hADV29S1A0JD25 119 aa10.51□□□□□ -0.73
CNKSR1-202ENST00000374253 SYCNQ0VAF6 134 aa10.51□□□□□ -0.73
CNKSR1-202ENST00000374253 NDUFV3P56181 108 aaKnown RBP10.5□□□□□ -0.73
CNKSR1-202ENST00000374253 C2orf48Q96LS8 159 aa10.5□□□□□ -0.73
CNKSR1-202ENST00000374253 Q6ZQY7 126 aa10.49□□□□□ -0.73
CNKSR1-202ENST00000374253 LINC00846Q9NV44 126 aa10.49□□□□□ -0.73
CNKSR1-202ENST00000374253 ZNF73O43830 326 aaPredicted RBP10.49□□□□□ -0.73
CNKSR1-202ENST00000374253 NHLRC4P0CG21 123 aaPredicted RBP10.49□□□□□ -0.73
CNKSR1-202ENST00000374253 MDFIQ99750 246 aa10.49□□□□□ -0.73
CNKSR1-202ENST00000374253 CSMD3Q7Z407 3707 aa10.49□□□□□ -0.73
CNKSR1-202ENST00000374253 A0A1B0GX51 115 aa10.48□□□□□ -0.73
CNKSR1-202ENST00000374253 TMEM256-PLSCR3K7ERE1 68 aa10.48□□□□□ -0.73
CNKSR1-202ENST00000374253 DIRC1Q969H9 104 aa10.48□□□□□ -0.73
CNKSR1-202ENST00000374253 DNAH7Q8WXX0 4024 aa10.47□□□□□ -0.73
CNKSR1-202ENST00000374253 LINC00643Q86TS7 51 aa10.47□□□□□ -0.73
CNKSR1-202ENST00000374253 USP17L23D6RBM5 183 aa10.47□□□□□ -0.73
CNKSR1-202ENST00000374253 Q6Q795 121 aa10.46□□□□□ -0.73
CNKSR1-202ENST00000374253 SDIM1Q6ZPB5 146 aa10.46□□□□□ -0.74
CNKSR1-202ENST00000374253 SERTAD4-AS1Q5TG53 156 aa10.45□□□□□ -0.74
CNKSR1-202ENST00000374253 LAMTOR3Q9UHA4 124 aa10.45□□□□□ -0.74
CNKSR1-202ENST00000374253 IGKV3D-7A0A0C4DH55 119 aa10.45□□□□□ -0.74
CNKSR1-202ENST00000374253 TRBV7-7A0A0K0K1E9 115 aa10.45□□□□□ -0.74
CNKSR1-202ENST00000374253 M0R378 163 aa10.44□□□□□ -0.74
CNKSR1-202ENST00000374253 FAM168BA1KXE4 195 aa10.43□□□□□ -0.74
CNKSR1-202ENST00000374253 COX7BP24311 80 aa10.43□□□□□ -0.74
CNKSR1-202ENST00000374253 FAM236AA0A1B0GUQ0 79 aa10.43□□□□□ -0.74
CNKSR1-202ENST00000374253 FAM236BA0A1B0GV22 79 aa10.43□□□□□ -0.74
CNKSR1-202ENST00000374253 CCKP06307 115 aa10.42□□□□□ -0.74
CNKSR1-202ENST00000374253 JMJD7-PLA2G4BH0Y9G9 81 aa10.42□□□□□ -0.74
CNKSR1-202ENST00000374253 M0R2N4 97 aa10.4□□□□□ -0.74
CNKSR1-202ENST00000374253 ELOF1P60002 83 aaKnown RBP10.4□□□□□ -0.74
CNKSR1-202ENST00000374253 KRTAP1-5Q9BYS1 174 aa10.4□□□□□ -0.74
CNKSR1-202ENST00000374253 PLECQ15149 4684 aaKnown RBP10.4□□□□□ -0.74
CNKSR1-202ENST00000374253 RPL37AP8A6NKH3 93 aa10.4□□□□□ -0.75
CNKSR1-202ENST00000374253 NKAPP1Q8N9T2 125 aa10.4□□□□□ -0.75
CNKSR1-202ENST00000374253 CCDC179H3BU77 68 aa10.39□□□□□ -0.75
CNKSR1-202ENST00000374253 RBM3P98179 157 aaKnown RBP10.39□□□□□ -0.75
CNKSR1-202ENST00000374253 C7orf33Q8WU49 177 aa10.38□□□□□ -0.75
CNKSR1-202ENST00000374253 A0A087WVE0 104 aa10.36□□□□□ -0.75
CNKSR1-202ENST00000374253 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
CNKSR1-202ENST00000374253 Q6ZQT0 140 aa10.34□□□□□ -0.75
CNKSR1-202ENST00000374253 FAM19A5Q7Z5A7 132 aaPredicted RBP10.34□□□□□ -0.75
CNKSR1-202ENST00000374253 IMUPQ9GZP8 106 aa10.34□□□□□ -0.75
CNKSR1-202ENST00000374253 UPK3BQ9BT76 320 aa10.34□□□□□ -0.75
CNKSR1-202ENST00000374253 B5MCH6 92 aa10.33□□□□□ -0.76
CNKSR1-202ENST00000374253 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
CNKSR1-202ENST00000374253 UBE2DNLQ8IWF7 75 aa10.33□□□□□ -0.76
CNKSR1-202ENST00000374253 RMI2Q96E14 147 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms