RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 SPAG11BQ08648 103 aa10.69□□□□□ -0.7
C9orf78-201ENST00000372447 Q6ZR54 194 aa10.69□□□□□ -0.7
C9orf78-201ENST00000372447 LINC00337Q8N6G1 96 aa10.68□□□□□ -0.7
C9orf78-201ENST00000372447 CLEC2BQ92478 149 aa10.68□□□□□ -0.7
C9orf78-201ENST00000372447 M0QXV9 152 aa10.67□□□□□ -0.7
C9orf78-201ENST00000372447 LST1O00453 97 aa10.67□□□□□ -0.7
C9orf78-201ENST00000372447 VPS25Q9BRG1 176 aa10.67□□□□□ -0.7
C9orf78-201ENST00000372447 J3QR89 54 aa10.67□□□□□ -0.7
C9orf78-201ENST00000372447 TTC32Q5I0X7 151 aa10.66□□□□□ -0.7
C9orf78-201ENST00000372447 TEN1Q86WV5 123 aa10.66□□□□□ -0.7
C9orf78-201ENST00000372447 C6orf223Q8N319 242 aa10.65□□□□□ -0.7
C9orf78-201ENST00000372447 CBY1Q9Y3M2 126 aa10.65□□□□□ -0.7
C9orf78-201ENST00000372447 TRBV10-2A0A0K0K1G8 114 aa10.65□□□□□ -0.71
C9orf78-201ENST00000372447 ANKRD29Q8N6D5 301 aa10.65□□□□□ -0.71
C9orf78-201ENST00000372447 RPL28P46779 137 aaKnown RBP10.64□□□□□ -0.71
C9orf78-201ENST00000372447 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
C9orf78-201ENST00000372447 UNQ6190/PRO20217Q6UXQ8 127 aa10.64□□□□□ -0.71
C9orf78-201ENST00000372447 C10orf25Q5T742 122 aa10.63□□□□□ -0.71
C9orf78-201ENST00000372447 KRTAP26-1Q6PEX3 210 aa10.63□□□□□ -0.71
C9orf78-201ENST00000372447 LINC01600Q96MT4 127 aa10.63□□□□□ -0.71
C9orf78-201ENST00000372447 LINC00526Q96FQ7 95 aa10.62□□□□□ -0.71
C9orf78-201ENST00000372447 DNAH10Q8IVF4 4471 aa10.62□□□□□ -0.71
C9orf78-201ENST00000372447 PPDPFLQ8WWR9 84 aa10.62□□□□□ -0.71
C9orf78-201ENST00000372447 NTN5Q8WTR8 489 aaPredicted RBP10.61□□□□□ -0.71
C9orf78-201ENST00000372447 SMIM11BQ8TCY0 68 aa10.6□□□□□ -0.71
C9orf78-201ENST00000372447 CARD19Q96LW7 228 aa10.6□□□□□ -0.71
C9orf78-201ENST00000372447 GVQW2A0A096LPI5 108 aaPredicted RBP10.6□□□□□ -0.71
C9orf78-201ENST00000372447 H3BT86 120 aa10.6□□□□□ -0.71
C9orf78-201ENST00000372447 NDUFC2O95298 119 aa10.6□□□□□ -0.71
C9orf78-201ENST00000372447 C1orf134Q5TEV5 83 aa10.59□□□□□ -0.71
C9orf78-201ENST00000372447 OR13C6PQ8NH95 151 aa10.59□□□□□ -0.71
C9orf78-201ENST00000372447 C1orf43Q9BWL3 253 aa10.59□□□□□ -0.71
C9orf78-201ENST00000372447 Q9HAA7 133 aa10.58□□□□□ -0.72
C9orf78-201ENST00000372447 ZNF561-AS1K7EIQ3 104 aa10.57□□□□□ -0.72
C9orf78-201ENST00000372447 DNAH17Q9UFH2 4485 aa10.57□□□□□ -0.72
C9orf78-201ENST00000372447 TRACP01848 142 aa10.57□□□□□ -0.72
C9orf78-201ENST00000372447 PRR3P79522 188 aaKnown RBP10.56□□□□□ -0.72
C9orf78-201ENST00000372447 HIGD2BQ4VC39 106 aa10.56□□□□□ -0.72
C9orf78-201ENST00000372447 FAM218AQ96MZ4 157 aa10.56□□□□□ -0.72
C9orf78-201ENST00000372447 C6orf48Q9UBA6 75 aa10.56□□□□□ -0.72
C9orf78-201ENST00000372447 FRAS1Q86XX4 4008 aa10.56□□□□□ -0.72
C9orf78-201ENST00000372447 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
C9orf78-201ENST00000372447 RTL8CO15255 209 aa10.55□□□□□ -0.72
C9orf78-201ENST00000372447 Q6ZRN7 208 aaPredicted RBP10.54□□□□□ -0.72
C9orf78-201ENST00000372447 C15orf56Q8N910 161 aa10.54□□□□□ -0.72
C9orf78-201ENST00000372447 H0YGX0 51 aa10.54□□□□□ -0.72
C9orf78-201ENST00000372447 CAMK2N2Q96S95 79 aa10.54□□□□□ -0.72
C9orf78-201ENST00000372447 FAT2Q9NYQ8 4349 aa10.54□□□□□ -0.72
C9orf78-201ENST00000372447 Q8NDZ9 215 aa10.53□□□□□ -0.72
C9orf78-201ENST00000372447 C2orf48Q96LS8 159 aa10.53□□□□□ -0.72
C9orf78-201ENST00000372447 TMEM126AQ9H061 195 aa10.52□□□□□ -0.72
C9orf78-201ENST00000372447 TEX49A0A1B0GTD5 131 aa10.52□□□□□ -0.73
C9orf78-201ENST00000372447 NCR3O14931 201 aa10.5□□□□□ -0.73
C9orf78-201ENST00000372447 A0A087WYN8 130 aa10.49□□□□□ -0.73
C9orf78-201ENST00000372447 Q6ZRU5 148 aa10.49□□□□□ -0.73
C9orf78-201ENST00000372447 RMI2Q96E14 147 aa10.49□□□□□ -0.73
C9orf78-201ENST00000372447 F8WDY8 70 aa10.49□□□□□ -0.73
C9orf78-201ENST00000372447 PSCAO43653 123 aa10.48□□□□□ -0.73
C9orf78-201ENST00000372447 BAALC-AS2P0C853 105 aa10.48□□□□□ -0.73
C9orf78-201ENST00000372447 TNP2Q05952 138 aa10.47□□□□□ -0.73
C9orf78-201ENST00000372447 S100A7L2Q5SY68 101 aa10.47□□□□□ -0.73
C9orf78-201ENST00000372447 DNAL4O96015 105 aa10.47□□□□□ -0.73
C9orf78-201ENST00000372447 XAGE1AQ9HD64 81 aa10.47□□□□□ -0.73
C9orf78-201ENST00000372447 LINC00336Q6ZUF6 198 aa10.46□□□□□ -0.74
C9orf78-201ENST00000372447 CDIP1Q9H305 208 aa10.45□□□□□ -0.74
C9orf78-201ENST00000372447 NDUFC2-KCTD14E9PQ53 114 aa10.44□□□□□ -0.74
C9orf78-201ENST00000372447 LECT2O14960 151 aa10.44□□□□□ -0.74
C9orf78-201ENST00000372447 SIGMAR1Q99720 223 aa10.44□□□□□ -0.74
C9orf78-201ENST00000372447 DNAH11Q96DT5 4516 aa10.44□□□□□ -0.74
C9orf78-201ENST00000372447 LRCOL1A6NCL2 159 aa10.44□□□□□ -0.74
C9orf78-201ENST00000372447 RPL18AQ02543 176 aaKnown RBP10.44□□□□□ -0.74
C9orf78-201ENST00000372447 SYCNQ0VAF6 134 aa10.44□□□□□ -0.74
C9orf78-201ENST00000372447 IGLV6-57P01721 117 aa10.43□□□□□ -0.74
C9orf78-201ENST00000372447 C22orf24Q9Y442 160 aa10.43□□□□□ -0.74
C9orf78-201ENST00000372447 PKD1P98161 4303 aa10.42□□□□□ -0.74
C9orf78-201ENST00000372447 A0A087WTM6 91 aa10.42□□□□□ -0.74
C9orf78-201ENST00000372447 A0A1B0GX51 115 aa10.42□□□□□ -0.74
C9orf78-201ENST00000372447 C6orf99Q4VX62 202 aa10.42□□□□□ -0.74
C9orf78-201ENST00000372447 USP17L23D6RBM5 183 aa10.4□□□□□ -0.74
C9orf78-201ENST00000372447 PCP4P48539 62 aa10.4□□□□□ -0.74
C9orf78-201ENST00000372447 GAGE2EQ4V326 116 aa10.4□□□□□ -0.74
C9orf78-201ENST00000372447 Q6ZRP5 223 aa10.4□□□□□ -0.74
C9orf78-201ENST00000372447 GAGE2DQ9UEU5 116 aa10.4□□□□□ -0.74
C9orf78-201ENST00000372447 VPREB1P12018 145 aa10.39□□□□□ -0.75
C9orf78-201ENST00000372447 Q8N814 137 aa10.39□□□□□ -0.75
C9orf78-201ENST00000372447 TRBV10-3A0A0K0K1G6 114 aa10.38□□□□□ -0.75
C9orf78-201ENST00000372447 LINC00167Q96N53 147 aa10.38□□□□□ -0.75
C9orf78-201ENST00000372447 A0A1B0GVY2 172 aa10.37□□□□□ -0.75
C9orf78-201ENST00000372447 SLPIP03973 132 aa10.37□□□□□ -0.75
C9orf78-201ENST00000372447 ORMDL1Q9P0S3 153 aa10.37□□□□□ -0.75
C9orf78-201ENST00000372447 TRAV23DV6A0A075B6W5 121 aa10.36□□□□□ -0.75
C9orf78-201ENST00000372447 M0R378 163 aa10.36□□□□□ -0.75
C9orf78-201ENST00000372447 SNCGO76070 127 aa10.36□□□□□ -0.75
C9orf78-201ENST00000372447 HECTD4Q9Y4D8 3996 aa10.35□□□□□ -0.75
C9orf78-201ENST00000372447 FAM240AA0A1B0GVK7 77 aa10.35□□□□□ -0.75
C9orf78-201ENST00000372447 TLX1NBP0CAT3 122 aa10.35□□□□□ -0.75
C9orf78-201ENST00000372447 LINC00575Q6W349 94 aa10.35□□□□□ -0.75
C9orf78-201ENST00000372447 EPPK1P58107 5090 aaKnown RBP10.35□□□□□ -0.75
C9orf78-201ENST00000372447 XGP55808 180 aa10.34□□□□□ -0.75
C9orf78-201ENST00000372447 C9orf129Q5T035 196 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms