RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 HIST1H2BKO60814 126 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 HIST1H2BJP06899 126 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 HIST1H2BOP23527 126 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 HIST1H2BBP33778 126 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 HIST1H2BDP58876 126 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 HIST1H2BCP62807 126 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 COX17Q14061 63 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 HIST2H2BEQ16778 126 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.93□□□□□ -1.3
MRPL55-213ENST00000366740 HIST1H2BHQ93079 126 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 HIST1H2BNQ99877 126 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 HIST1H2BMQ99879 126 aa6.93□□□□□ -1.3
MRPL55-213ENST00000366740 VPREB1P12018 145 aa6.92□□□□□ -1.3
MRPL55-213ENST00000366740 PMCHL2Q9BQD1 86 aa6.92□□□□□ -1.3
MRPL55-213ENST00000366740 A0A0U1RRA0 63 aa6.91□□□□□ -1.3
MRPL55-213ENST00000366740 ZNF861PO60384 105 aa6.91□□□□□ -1.3
MRPL55-213ENST00000366740 HSPB8Q9UJY1 196 aa6.91□□□□□ -1.3
MRPL55-213ENST00000366740 LINC00158P58513 81 aa6.9□□□□□ -1.3
MRPL55-213ENST00000366740 TSPEAR-AS2P59090 65 aa6.9□□□□□ -1.3
MRPL55-213ENST00000366740 SFTA2Q6UW10 78 aa6.9□□□□□ -1.3
MRPL55-213ENST00000366740 NKAPP1Q8N9T2 125 aa6.9□□□□□ -1.3
MRPL55-213ENST00000366740 BCE1O60756 84 aa6.89□□□□□ -1.31
MRPL55-213ENST00000366740 SMIM13P0DJ93 91 aa6.89□□□□□ -1.31
MRPL55-213ENST00000366740 LEPROTO15243 131 aa6.88□□□□□ -1.31
MRPL55-213ENST00000366740 NDUFA12Q9UI09 145 aa6.88□□□□□ -1.31
MRPL55-213ENST00000366740 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
MRPL55-213ENST00000366740 IGKV2-28A0A075B6P5 120 aa6.87□□□□□ -1.31
MRPL55-213ENST00000366740 DPM2O94777 84 aa6.87□□□□□ -1.31
MRPL55-213ENST00000366740 IGKV2D-28P01615 120 aa6.87□□□□□ -1.31
MRPL55-213ENST00000366740 IGKCP01834 107 aa6.87□□□□□ -1.31
MRPL55-213ENST00000366740 PLNP26678 52 aa6.87□□□□□ -1.31
MRPL55-213ENST00000366740 KRTAP13-1Q8IUC0 172 aa6.87□□□□□ -1.31
MRPL55-213ENST00000366740 MAP1LC3CQ9BXW4 147 aa6.87□□□□□ -1.31
MRPL55-213ENST00000366740 HERV-K104P63124 156 aa6.86□□□□□ -1.31
MRPL55-213ENST00000366740 RPL24P83731 157 aaKnown RBP6.86□□□□□ -1.31
MRPL55-213ENST00000366740 MIR7-3HGQ8N6C7 128 aa6.86□□□□□ -1.31
MRPL55-213ENST00000366740 MYMXA0A1B0GTQ4 84 aa6.85□□□□□ -1.31
MRPL55-213ENST00000366740 TMEM238C9JI98 176 aa6.85□□□□□ -1.31
MRPL55-213ENST00000366740 SYS1-DBNDD2H3BUS1 97 aa6.85□□□□□ -1.31
MRPL55-213ENST00000366740 J3QQQ9 107 aa6.85□□□□□ -1.31
MRPL55-213ENST00000366740 RPL28P46779 137 aaKnown RBP6.85□□□□□ -1.31
MRPL55-213ENST00000366740 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
MRPL55-213ENST00000366740 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
MRPL55-213ENST00000366740 A0A087X002 238 aa6.84□□□□□ -1.31
MRPL55-213ENST00000366740 M0R378 163 aa6.84□□□□□ -1.31
MRPL55-213ENST00000366740 TSPAN13O95857 204 aa6.84□□□□□ -1.31
MRPL55-213ENST00000366740 COA6Q5JTJ3 125 aaKnown RBP6.84□□□□□ -1.31
MRPL55-213ENST00000366740 TMEM126AQ9H061 195 aa6.84□□□□□ -1.31
MRPL55-213ENST00000366740 ATP6V1G1O75348 118 aa6.83□□□□□ -1.32
MRPL55-213ENST00000366740 DAND5Q8N907 189 aa6.83□□□□□ -1.32
MRPL55-213ENST00000366740 UBE2AP49459 152 aa6.82□□□□□ -1.32
MRPL55-213ENST00000366740 HERVK_113P61574 105 aa6.82□□□□□ -1.32
MRPL55-213ENST00000366740 PRLHP81277 87 aa6.82□□□□□ -1.32
MRPL55-213ENST00000366740 LINC01545Q5VT33 79 aa6.82□□□□□ -1.32
MRPL55-213ENST00000366740 BOD1L2Q8IYS8 172 aa6.82□□□□□ -1.32
MRPL55-213ENST00000366740 LOC107984156A0A0G2JMH3 177 aa6.81□□□□□ -1.32
MRPL55-213ENST00000366740 LINC00587B1AMM8 73 aa6.81□□□□□ -1.32
MRPL55-213ENST00000366740 E9PLD3 99 aa6.81□□□□□ -1.32
MRPL55-213ENST00000366740 C3orf79P0CE67 100 aa6.81□□□□□ -1.32
MRPL55-213ENST00000366740 LGALS3P17931 250 aaKnown RBP6.81□□□□□ -1.32
MRPL55-213ENST00000366740 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
MRPL55-213ENST00000366740 FAM19A1Q7Z5A9 133 aa6.81□□□□□ -1.32
MRPL55-213ENST00000366740 ARL17AQ8IVW1 177 aa6.81□□□□□ -1.32
MRPL55-213ENST00000366740 ANAPC11Q9NYG5 84 aa6.81□□□□□ -1.32
MRPL55-213ENST00000366740 NCR3O14931 201 aa6.8□□□□□ -1.32
MRPL55-213ENST00000366740 NMUP48645 174 aa6.8□□□□□ -1.32
MRPL55-213ENST00000366740 ADAMTSL4-AS1Q5T5F5 129 aa6.8□□□□□ -1.32
MRPL55-213ENST00000366740 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
MRPL55-213ENST00000366740 EIF4EBP3O60516 100 aaPredicted RBP6.79□□□□□ -1.32
MRPL55-213ENST00000366740 CRYGAP11844 174 aa6.79□□□□□ -1.32
MRPL55-213ENST00000366740 IGKV2D-26A0A0A0MRZ7 120 aa6.78□□□□□ -1.32
MRPL55-213ENST00000366740 A0A0J9YXY3 114 aa6.78□□□□□ -1.32
MRPL55-213ENST00000366740 TPRXLQ17RH7 258 aa6.78□□□□□ -1.32
MRPL55-213ENST00000366740 SOSTDC1Q6X4U4 206 aa6.78□□□□□ -1.32
MRPL55-213ENST00000366740 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.33
MRPL55-213ENST00000366740 KRTDAPP60985 99 aa6.77□□□□□ -1.33
MRPL55-213ENST00000366740 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
MRPL55-213ENST00000366740 TTTY13Q9BZ97 58 aa6.77□□□□□ -1.33
MRPL55-213ENST00000366740 KRTAP4-16G5E9R7 235 aaPredicted RBP6.76□□□□□ -1.33
MRPL55-213ENST00000366740 S100A1P23297 94 aa6.76□□□□□ -1.33
MRPL55-213ENST00000366740 SPRR1AP35321 89 aa6.76□□□□□ -1.33
MRPL55-213ENST00000366740 LITAFQ99732 161 aa6.76□□□□□ -1.33
MRPL55-213ENST00000366740 RETNLBQ9BQ08 111 aa6.76□□□□□ -1.33
MRPL55-213ENST00000366740 KCNQ1DNQ9H478 68 aa6.76□□□□□ -1.33
MRPL55-213ENST00000366740 PRYO14603 147 aa6.75□□□□□ -1.33
MRPL55-213ENST00000366740 NPC2P61916 151 aa6.75□□□□□ -1.33
MRPL55-213ENST00000366740 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
MRPL55-213ENST00000366740 CDIP1Q9H305 208 aa6.74□□□□□ -1.33
MRPL55-213ENST00000366740 TRBV10-2A0A0K0K1G8 114 aa6.73□□□□□ -1.33
MRPL55-213ENST00000366740 NDUFC2O95298 119 aa6.73□□□□□ -1.33
MRPL55-213ENST00000366740 CTAG1AP78358 180 aa6.73□□□□□ -1.33
MRPL55-213ENST00000366740 FAM229BQ4G0N7 80 aa6.73□□□□□ -1.33
MRPL55-213ENST00000366740 LINC00337Q8N6G1 96 aa6.73□□□□□ -1.33
MRPL55-213ENST00000366740 LINC00304Q8N9R0 145 aa6.73□□□□□ -1.33
MRPL55-213ENST00000366740 DDTP30046 118 aa6.72□□□□□ -1.33
MRPL55-213ENST00000366740 ANKRD39Q53RE8 183 aa6.72□□□□□ -1.33
MRPL55-213ENST00000366740 ATOH7Q8N100 152 aa6.72□□□□□ -1.33
MRPL55-213ENST00000366740 MIEN1Q9BRT3 115 aa6.72□□□□□ -1.33
MRPL55-213ENST00000366740 ZNF815PA8K554 130 aa6.71□□□□□ -1.34
MRPL55-213ENST00000366740 IGLV6-57P01721 117 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms