RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 SSSCA1O60232 199 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 Q6AWC8 147 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 Q6JHZ5 121 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 BAGE2Q86Y30 109 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 WFDC9Q8NEX5 89 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 LSM10Q969L4 123 aaKnown RBP-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 LINC01600Q96MT4 127 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 AMELXQ99217 191 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 RERGLQ9H628 205 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 NDUFA4L2Q9NRX3 87 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 PAIP2BQ9ULR5 123 aaKnown RBP-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 SERP1Q9Y6X1 66 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 S4R3F8 94 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 ARHGEF5Q12774 1597 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 NALCNQ8IZF0 1738 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 ARHGAP35Q9NRY4 1499 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 A0A087WVE0 104 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 MIF4GDA9UHW6 222 aaKnown RBP-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 F8VRH5 84 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 UQCR11O14957 56 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 TPPP2P59282 170 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 DEFB136Q30KP8 78 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 DEFB110Q30KQ9 67 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 CLPSL2Q6UWE3 100 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 ARL11Q969Q4 196 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 SNRNP25Q9BV90 132 aaKnown RBP-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 NAA60Q9H7X0 242 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 DYNLRB1Q9NP97 96 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 CRIPTQ9P021 101 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 ADAMTS12P58397 1594 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 FMN2Q9NZ56 1722 aa-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 CPSF1Q10570 1443 aaKnown RBP-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 TROQ12816 1431 aaPredicted RBP-0.21□□□□□ -2.44
RNU4-48P-201ENST00000365559 TULP4Q9NRJ4 1543 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 TOP2BQ02880 1626 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 TRBV7-3A0A075B6L6 115 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 C9orf92A6NGG3 77 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 H0YGG7 62 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 GNG7O60262 68 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 COX6B1P14854 86 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 SPRR1BP22528 89 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 DEFB135Q30KP9 77 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 MEIG1Q5JSS6 88 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 TSLPQ969D9 159 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 MGST2Q99735 147 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 LINC00470Q9BZP3 86 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 FXYD6Q9H0Q3 95 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 LINC00472Q9H8W2 130 aa-0.22□□□□□ -2.44
RNU4-48P-201ENST00000365559 NAIPQ13075 1403 aa-0.22□□□□□ -2.45
RNU4-48P-201ENST00000365559 ANKRD50Q9ULJ7 1429 aa-0.22□□□□□ -2.45
RNU4-48P-201ENST00000365559 FYCO1Q9BQS8 1478 aa-0.22□□□□□ -2.45
RNU4-48P-201ENST00000365559 MRC2Q9UBG0 1479 aa-0.22□□□□□ -2.45
RNU4-48P-201ENST00000365559 SHANK2Q9UPX8 1470 aa-0.22□□□□□ -2.45
RNU4-48P-201ENST00000365559 KIAA0586Q9BVV6 1533 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 ALKQ9UM73 1620 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 CHD1O14646 1710 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 KNDC1Q76NI1 1749 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 XRN1Q8IZH2 1706 aaKnown RBP-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 LOC285095A0A1B0GVY8 99 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 IGLC7A0M8Q6 106 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 LINC01546A6NGU7 62 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 A8MTW9 85 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 F8WEM9 126 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 HMGN4O00479 90 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 CD52P31358 61 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 SELENOWP63302 87 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 PRLHP81277 87 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 CATR1Q13166 79 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 CCDC58Q4VC31 144 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 PPP3R2Q96LZ3 170 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 APLNQ9ULZ1 77 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 UBE2D4Q9Y2X8 147 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 NCOA3Q9Y6Q9 1424 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 POLA1P09884 1462 aaPredicted RBP-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 ERVK-7P63135 1459 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 GAPVD1Q14C86 1478 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 NCOA2Q15596 1464 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 PRDM15P57071 1507 aaPredicted RBP-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 HMGXB3Q12766 1538 aa-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.23□□□□□ -2.45
RNU4-48P-201ENST00000365559 KIAA0556O60303 1618 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 PTPN23Q9H3S7 1636 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 TIAM2Q8IVF5 1701 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 ABCA3Q99758 1704 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 SPINK4O60575 86 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 SFT2D2O95562 160 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 IFNGP01579 166 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 TNP1P09430 55 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 SPART-AS1P0CW21 52 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 UBE2D3P61077 147 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 H1FX-AS1Q4G0G2 97 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 Q56UQ5 140 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 MYOZ3Q8TDC0 251 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 TSC22D3Q99576 134 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 SPANXDQ9BXN6 97 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 FAM107BQ9H098 131 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 PRO3102Q9H379 93 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 FAIMQ9NVQ4 179 aa-0.24□□□□□ -2.45
RNU4-48P-201ENST00000365559 LINC01558Q9Y6Z2 57 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms