RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 C1orf137Q5JT78 98 aa9.5□□□□□ -0.89
CTR9-201ENST00000361367 ATP5EP2Q5VTU8 51 aa9.49□□□□□ -0.89
CTR9-201ENST00000361367 LINC00337Q8N6G1 96 aa9.49□□□□□ -0.89
CTR9-201ENST00000361367 SMIM20Q8N5G0 67 aa9.49□□□□□ -0.89
CTR9-201ENST00000361367 WWC2-AS2Q96NR7 200 aa9.49□□□□□ -0.89
CTR9-201ENST00000361367 COL6A3P12111 3177 aa9.49□□□□□ -0.89
CTR9-201ENST00000361367 A0A087WYN8 130 aa9.49□□□□□ -0.89
CTR9-201ENST00000361367 NBDYA0A0U1RRE5 68 aa9.49□□□□□ -0.89
CTR9-201ENST00000361367 ENHOQ6UWT2 76 aa9.49□□□□□ -0.89
CTR9-201ENST00000361367 LAMA1P25391 3075 aa9.48□□□□□ -0.89
CTR9-201ENST00000361367 PRYO14603 147 aa9.48□□□□□ -0.89
CTR9-201ENST00000361367 C6orf48Q9UBA6 75 aa9.48□□□□□ -0.89
CTR9-201ENST00000361367 SPATA3Q8NHX4 192 aa9.48□□□□□ -0.89
CTR9-201ENST00000361367 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
CTR9-201ENST00000361367 C10orf25Q5T742 122 aa9.47□□□□□ -0.89
CTR9-201ENST00000361367 MT-ATP8P03928 68 aa9.46□□□□□ -0.89
CTR9-201ENST00000361367 FLNCQ14315 2725 aa9.46□□□□□ -0.9
CTR9-201ENST00000361367 B5MCH6 92 aa9.45□□□□□ -0.9
CTR9-201ENST00000361367 IGKV4-1P06312 121 aa9.45□□□□□ -0.9
CTR9-201ENST00000361367 DNAH10OSP0CZ25 163 aa9.44□□□□□ -0.9
CTR9-201ENST00000361367 PRLHP81277 87 aa9.44□□□□□ -0.9
CTR9-201ENST00000361367 TNRC18O15417 2968 aaPredicted RBP9.43□□□□□ -0.9
CTR9-201ENST00000361367 FRYLO94915 3013 aa9.43□□□□□ -0.9
CTR9-201ENST00000361367 LINC00575Q6W349 94 aa9.42□□□□□ -0.9
CTR9-201ENST00000361367 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
CTR9-201ENST00000361367 GCN1Q92616 2671 aaKnown RBP9.41□□□□□ -0.9
CTR9-201ENST00000361367 CR1P17927 2039 aa9.4□□□□□ -0.9
CTR9-201ENST00000361367 Q9BRP9 147 aa9.4□□□□□ -0.9
CTR9-201ENST00000361367 LINC00167Q96N53 147 aa9.4□□□□□ -0.91
CTR9-201ENST00000361367 VCANP13611 3396 aa9.4□□□□□ -0.91
CTR9-201ENST00000361367 CHKB-CPT1BH3BT56 60 aa9.39□□□□□ -0.91
CTR9-201ENST00000361367 LINC00612Q8N6U2 182 aa9.39□□□□□ -0.91
CTR9-201ENST00000361367 WFDC13Q8IUB5 93 aa9.39□□□□□ -0.91
CTR9-201ENST00000361367 TM2D3Q9BRN9 247 aa9.39□□□□□ -0.91
CTR9-201ENST00000361367 SOSTDC1Q6X4U4 206 aa9.38□□□□□ -0.91
CTR9-201ENST00000361367 NOTCH1P46531 2555 aa9.38□□□□□ -0.91
CTR9-201ENST00000361367 Q6JHZ5 121 aa9.38□□□□□ -0.91
CTR9-201ENST00000361367 GVQW2A0A096LPI5 108 aaPredicted RBP9.37□□□□□ -0.91
CTR9-201ENST00000361367 SMCR5Q8TEV8 140 aa9.37□□□□□ -0.91
CTR9-201ENST00000361367 FRYQ5TBA9 3013 aa9.36□□□□□ -0.91
CTR9-201ENST00000361367 C20orf197Q8N268 126 aa9.36□□□□□ -0.91
CTR9-201ENST00000361367 RTL8CO15255 209 aa9.35□□□□□ -0.91
CTR9-201ENST00000361367 CELSR3Q9NYQ7 3312 aa9.35□□□□□ -0.91
CTR9-201ENST00000361367 UBR5O95071 2799 aaPredicted RBP9.34□□□□□ -0.91
CTR9-201ENST00000361367 ATMQ13315 3056 aa9.34□□□□□ -0.91
CTR9-201ENST00000361367 TMEM258P61165 79 aa9.34□□□□□ -0.91
CTR9-201ENST00000361367 FAM240AA0A1B0GVK7 77 aa9.33□□□□□ -0.92
CTR9-201ENST00000361367 A0A087WSZ3 146 aa9.32□□□□□ -0.92
CTR9-201ENST00000361367 DMXL2Q8TDJ6 3036 aa9.32□□□□□ -0.92
CTR9-201ENST00000361367 IMUPQ9GZP8 106 aa9.32□□□□□ -0.92
CTR9-201ENST00000361367 C16orf90A8MZG2 172 aa9.32□□□□□ -0.92
CTR9-201ENST00000361367 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
CTR9-201ENST00000361367 XGP55808 180 aa9.31□□□□□ -0.92
CTR9-201ENST00000361367 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
CTR9-201ENST00000361367 CHTF8P0CG12 524 aa9.3□□□□□ -0.92
CTR9-201ENST00000361367 Q6ZRP5 223 aa9.29□□□□□ -0.92
CTR9-201ENST00000361367 COL12A1Q99715 3063 aa9.29□□□□□ -0.92
CTR9-201ENST00000361367 FAM19A3Q7Z5A8 133 aa9.28□□□□□ -0.92
CTR9-201ENST00000361367 UQCRQO14949 82 aa9.28□□□□□ -0.92
CTR9-201ENST00000361367 BOD1L1Q8NFC6 3051 aa9.27□□□□□ -0.92
CTR9-201ENST00000361367 KIAA0087Q14695 138 aa9.27□□□□□ -0.93
CTR9-201ENST00000361367 CASC2Q6XLA1 102 aa9.26□□□□□ -0.93
CTR9-201ENST00000361367 LITAFQ99732 161 aa9.26□□□□□ -0.93
CTR9-201ENST00000361367 ELOF1P60002 83 aaKnown RBP9.25□□□□□ -0.93
CTR9-201ENST00000361367 TRBV7-6A0A0J9YX20 115 aa9.24□□□□□ -0.93
CTR9-201ENST00000361367 WIPF1O43516 503 aa9.24□□□□□ -0.93
CTR9-201ENST00000361367 Q6ZRX8 168 aa9.24□□□□□ -0.93
CTR9-201ENST00000361367 FAM218AQ96MZ4 157 aa9.24□□□□□ -0.93
CTR9-201ENST00000361367 IGHV6-1A0A0B4J1U7 121 aa9.23□□□□□ -0.93
CTR9-201ENST00000361367 VPREB1P12018 145 aa9.23□□□□□ -0.93
CTR9-201ENST00000361367 SERP2Q8N6R1 65 aa9.23□□□□□ -0.93
CTR9-201ENST00000361367 DEFB116Q30KQ4 102 aa9.22□□□□□ -0.93
CTR9-201ENST00000361367 C15orf56Q8N910 161 aa9.21□□□□□ -0.93
CTR9-201ENST00000361367 ITPR1Q14643 2758 aa9.21□□□□□ -0.93
CTR9-201ENST00000361367 LINC00846Q9NV44 126 aa9.21□□□□□ -0.93
CTR9-201ENST00000361367 DNAH14Q0VDD8 3507 aa9.21□□□□□ -0.94
CTR9-201ENST00000361367 TACC2O95359 2948 aa9.21□□□□□ -0.94
CTR9-201ENST00000361367 C5orf47Q569G3 176 aa9.21□□□□□ -0.94
CTR9-201ENST00000361367 Q6ZVQ6 151 aa9.21□□□□□ -0.94
CTR9-201ENST00000361367 A0A087WVE0 104 aa9.21□□□□□ -0.94
CTR9-201ENST00000361367 EPM2AB3EWF7 344 aa9.21□□□□□ -0.94
CTR9-201ENST00000361367 FAM168BA1KXE4 195 aa9.2□□□□□ -0.94
CTR9-201ENST00000361367 C3orf22Q8N5N4 141 aa9.2□□□□□ -0.94
CTR9-201ENST00000361367 APLNQ9ULZ1 77 aa9.2□□□□□ -0.94
CTR9-201ENST00000361367 MOBPQ13875 183 aa9.2□□□□□ -0.94
CTR9-201ENST00000361367 ITPR2Q14571 2701 aa9.2□□□□□ -0.94
CTR9-201ENST00000361367 ADGRG4Q8IZF6 3080 aa9.19□□□□□ -0.94
CTR9-201ENST00000361367 FREM2Q5SZK8 3169 aa9.19□□□□□ -0.94
CTR9-201ENST00000361367 ZNF575Q86XF7 245 aa9.19□□□□□ -0.94
CTR9-201ENST00000361367 FAM30AQ9NZY2 134 aa9.19□□□□□ -0.94
CTR9-201ENST00000361367 FAM229AH3BQW9 127 aa9.19□□□□□ -0.94
CTR9-201ENST00000361367 J3KT08 172 aa9.19□□□□□ -0.94
CTR9-201ENST00000361367 LIMD2Q9BT23 127 aa9.18□□□□□ -0.94
CTR9-201ENST00000361367 LINC01547P58512 204 aaPredicted RBP9.18□□□□□ -0.94
CTR9-201ENST00000361367 SERTAD4-AS1Q5TG53 156 aa9.18□□□□□ -0.94
CTR9-201ENST00000361367 SVIPQ8NHG7 77 aa9.18□□□□□ -0.94
CTR9-201ENST00000361367 SNURFQ9Y675 71 aa9.18□□□□□ -0.94
CTR9-201ENST00000361367 IGLV6-57P01721 117 aa9.17□□□□□ -0.94
CTR9-201ENST00000361367 A0A087WTM6 91 aa9.16□□□□□ -0.94
CTR9-201ENST00000361367 BCE1O60756 84 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms