RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 H7C2G1 150 aa15.04■□□□□ -0
SDF4-202ENST00000360001 TLX1NBP0CAT3 122 aa15.04■□□□□ -0
SDF4-202ENST00000360001 CNBPP62633 177 aaKnown RBP15.04■□□□□ -0
SDF4-202ENST00000360001 A0A1W2PPM0 123 aa15.04■□□□□ -0
SDF4-202ENST00000360001 NDUFC2O95298 119 aa15.04■□□□□ -0
SDF4-202ENST00000360001 RPL13AP40429 203 aaKnown RBP15.04■□□□□ -0
SDF4-202ENST00000360001 LINC00337Q8N6G1 96 aa15.04■□□□□ -0
SDF4-202ENST00000360001 GAGE2EQ4V326 116 aa15.02□□□□□ -0.01
SDF4-202ENST00000360001 GAGE2DQ9UEU5 116 aa15.02□□□□□ -0.01
SDF4-202ENST00000360001 TRAV13-2A0A0B4J235 113 aa15.01□□□□□ -0.01
SDF4-202ENST00000360001 PRR3P79522 188 aaKnown RBP15.01□□□□□ -0.01
SDF4-202ENST00000360001 C1orf134Q5TEV5 83 aa15.01□□□□□ -0.01
SDF4-202ENST00000360001 IGLV2-33A0A075B6J2 118 aaPredicted RBP15□□□□□ -0.01
SDF4-202ENST00000360001 VAMP3Q15836 100 aa15□□□□□ -0.01
SDF4-202ENST00000360001 RPL18AQ02543 176 aaKnown RBP14.99□□□□□ -0.01
SDF4-202ENST00000360001 Q1RN00 199 aa14.99□□□□□ -0.01
SDF4-202ENST00000360001 HYDINQ4G0P3 5121 aa14.99□□□□□ -0.01
SDF4-202ENST00000360001 FABP2P12104 132 aa14.98□□□□□ -0.01
SDF4-202ENST00000360001 DNAH17Q9UFH2 4485 aa14.98□□□□□ -0.01
SDF4-202ENST00000360001 A0A087WTM6 91 aa14.97□□□□□ -0.01
SDF4-202ENST00000360001 C9orf129Q5T035 196 aaKnown RBP14.97□□□□□ -0.01
SDF4-202ENST00000360001 Q8N814 137 aa14.97□□□□□ -0.01
SDF4-202ENST00000360001 LOC107984640A0A0U1RRK4 108 aa14.95□□□□□ -0.02
SDF4-202ENST00000360001 NCR3O14931 201 aa14.94□□□□□ -0.02
SDF4-202ENST00000360001 TRIAP1O43715 76 aa14.93□□□□□ -0.02
SDF4-202ENST00000360001 PSMB2P49721 201 aa14.93□□□□□ -0.02
SDF4-202ENST00000360001 SACSQ9NZJ4 4579 aa14.93□□□□□ -0.02
SDF4-202ENST00000360001 VPREB1P12018 145 aa14.93□□□□□ -0.02
SDF4-202ENST00000360001 OR13C6PQ8NH95 151 aa14.93□□□□□ -0.02
SDF4-202ENST00000360001 SPCS1Q9Y6A9 102 aa14.93□□□□□ -0.02
SDF4-202ENST00000360001 GAGE2BQ13066 116 aa14.92□□□□□ -0.02
SDF4-202ENST00000360001 FRAS1Q86XX4 4008 aa14.91□□□□□ -0.02
SDF4-202ENST00000360001 TRBV10-2A0A0K0K1G8 114 aa14.91□□□□□ -0.02
SDF4-202ENST00000360001 K7EP34 96 aa14.9□□□□□ -0.02
SDF4-202ENST00000360001 C9orf163Q8N9P6 203 aa14.9□□□□□ -0.02
SDF4-202ENST00000360001 GAGE10A6NGK3 116 aa14.89□□□□□ -0.03
SDF4-202ENST00000360001 SCGB1C2P0DMR2 95 aa14.88□□□□□ -0.03
SDF4-202ENST00000360001 SMIM11BQ8TCY0 68 aa14.88□□□□□ -0.03
SDF4-202ENST00000360001 UBE2V1Q13404 147 aa14.87□□□□□ -0.03
SDF4-202ENST00000360001 LYRM7Q5U5X0 104 aa14.87□□□□□ -0.03
SDF4-202ENST00000360001 TMEM126AQ9H061 195 aa14.87□□□□□ -0.03
SDF4-202ENST00000360001 HECTD4Q9Y4D8 3996 aa14.87□□□□□ -0.03
SDF4-202ENST00000360001 RPL28P46779 137 aaKnown RBP14.87□□□□□ -0.03
SDF4-202ENST00000360001 SERTAD4-AS1Q5TG53 156 aa14.87□□□□□ -0.03
SDF4-202ENST00000360001 PLA2G2DQ9UNK4 145 aa14.87□□□□□ -0.03
SDF4-202ENST00000360001 A0A096LNI7 61 aa14.86□□□□□ -0.03
SDF4-202ENST00000360001 RTL8CO15255 209 aa14.85□□□□□ -0.03
SDF4-202ENST00000360001 GTF2H5Q6ZYL4 71 aa14.85□□□□□ -0.03
SDF4-202ENST00000360001 C16orf90A8MZG2 172 aa14.85□□□□□ -0.03
SDF4-202ENST00000360001 S100A7L2Q5SY68 101 aa14.85□□□□□ -0.03
SDF4-202ENST00000360001 IGLV6-57P01721 117 aa14.84□□□□□ -0.03
SDF4-202ENST00000360001 TNP2Q05952 138 aa14.84□□□□□ -0.03
SDF4-202ENST00000360001 LINC01620Q4KN68 170 aa14.84□□□□□ -0.03
SDF4-202ENST00000360001 FAM168BA1KXE4 195 aa14.84□□□□□ -0.03
SDF4-202ENST00000360001 COX6CP09669 75 aa14.84□□□□□ -0.03
SDF4-202ENST00000360001 M0R378 163 aa14.83□□□□□ -0.04
SDF4-202ENST00000360001 TCL1BO95988 128 aa14.83□□□□□ -0.04
SDF4-202ENST00000360001 LCE6AA0A183 80 aa14.82□□□□□ -0.04
SDF4-202ENST00000360001 KRTAP7-1Q8IUC3 87 aa14.82□□□□□ -0.04
SDF4-202ENST00000360001 SDIM1Q6ZPB5 146 aa14.82□□□□□ -0.04
SDF4-202ENST00000360001 IGKV2-24A0A0C4DH68 120 aa14.81□□□□□ -0.04
SDF4-202ENST00000360001 TRBV10-3A0A0K0K1G6 114 aa14.81□□□□□ -0.04
SDF4-202ENST00000360001 IGLV5-37A0A075B6J1 123 aa14.8□□□□□ -0.04
SDF4-202ENST00000360001 TRBV20-1A0A075B6N2 111 aa14.8□□□□□ -0.04
SDF4-202ENST00000360001 FUSP35637 526 aaKnown RBP eCLIP14.8□□□□□ -0.044e-7■■■■□ 20.8
SDF4-202ENST00000360001 H3BMG7 143 aa14.79□□□□□ -0.04
SDF4-202ENST00000360001 NKAPP1Q8N9T2 125 aa14.79□□□□□ -0.04
SDF4-202ENST00000360001 PKIGQ9Y2B9 76 aa14.79□□□□□ -0.04
SDF4-202ENST00000360001 DNAH11Q96DT5 4516 aa14.79□□□□□ -0.04
SDF4-202ENST00000360001 CLEC2BQ92478 149 aa14.78□□□□□ -0.04
SDF4-202ENST00000360001 FAT2Q9NYQ8 4349 aa14.78□□□□□ -0.04
SDF4-202ENST00000360001 CHTF8P0CG12 524 aa14.77□□□□□ -0.04
SDF4-202ENST00000360001 FAM19A5Q7Z5A7 132 aaPredicted RBP14.76□□□□□ -0.05
SDF4-202ENST00000360001 C7orf33Q8WU49 177 aa14.76□□□□□ -0.05
SDF4-202ENST00000360001 C22orf24Q9Y442 160 aa14.74□□□□□ -0.05
SDF4-202ENST00000360001 TRAV23DV6A0A075B6W5 121 aa14.73□□□□□ -0.05
SDF4-202ENST00000360001 A0A1W2PNN7 141 aa14.73□□□□□ -0.05
SDF4-202ENST00000360001 ATXN8Q156A1 80 aa14.73□□□□□ -0.05
SDF4-202ENST00000360001 LST1O00453 97 aa14.73□□□□□ -0.05
SDF4-202ENST00000360001 C6orf99Q4VX62 202 aa14.73□□□□□ -0.05
SDF4-202ENST00000360001 IGLV5-52A0A0A0MRZ9 124 aa14.72□□□□□ -0.05
SDF4-202ENST00000360001 PANO1I0J062 215 aa14.71□□□□□ -0.05
SDF4-202ENST00000360001 FAM218AQ96MZ4 157 aa14.71□□□□□ -0.05
SDF4-202ENST00000360001 H0YGX0 51 aa14.7□□□□□ -0.06
SDF4-202ENST00000360001 MRPL55Q7Z7F7 128 aaKnown RBP14.7□□□□□ -0.06
SDF4-202ENST00000360001 LINC00474Q9P2X8 69 aa14.7□□□□□ -0.06
SDF4-202ENST00000360001 LINC00167Q96N53 147 aa14.69□□□□□ -0.06
SDF4-202ENST00000360001 MTURNQ8N3F0 131 aa14.68□□□□□ -0.06
SDF4-202ENST00000360001 ZNF73O43830 326 aaPredicted RBP14.67□□□□□ -0.06
SDF4-202ENST00000360001 PRO0461Q9UI25 63 aa14.67□□□□□ -0.06
SDF4-202ENST00000360001 DNAH5Q8TE73 4624 aa14.67□□□□□ -0.06
SDF4-202ENST00000360001 PKD1P98161 4303 aa14.67□□□□□ -0.06
SDF4-202ENST00000360001 M0QXV9 152 aa14.67□□□□□ -0.06
SDF4-202ENST00000360001 KRTAP10-2P60368 255 aa14.67□□□□□ -0.06
SDF4-202ENST00000360001 KCNQ1DNQ9H478 68 aa14.67□□□□□ -0.06
SDF4-202ENST00000360001 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.67□□□□□ -0.06
SDF4-202ENST00000360001 RYR2Q92736 4967 aa14.66□□□□□ -0.06
SDF4-202ENST00000360001 IGLV1-50A0A075B6I6 118 aa14.66□□□□□ -0.06
SDF4-202ENST00000360001 RPL37AP8A6NKH3 93 aa14.66□□□□□ -0.06
SDF4-202ENST00000360001 SPACA4Q8TDM5 124 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 337 ms