RNA–Protein interactions for RNA: ENST00000359540.7

BCR-202, Transcript of BCR, RhoGEF and GTPase activating protein, humanhuman

TSL 1 (best) BASIC

Gene BCR, Length 4,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCR-202ENST00000359540 ZNF575Q86XF7 245 aa13.73□□□□□ -0.21
BCR-202ENST00000359540 NDUFC2-KCTD14E9PQ53 114 aa13.73□□□□□ -0.21
BCR-202ENST00000359540 FSHBP01225 129 aa13.73□□□□□ -0.21
BCR-202ENST00000359540 PRR4Q16378 134 aa13.73□□□□□ -0.21
BCR-202ENST00000359540 C14orf177Q52M58 125 aa13.73□□□□□ -0.21
BCR-202ENST00000359540 ITPR3Q14573 2671 aa13.72□□□□□ -0.21
BCR-202ENST00000359540 FAM19A3Q7Z5A8 133 aa13.72□□□□□ -0.21
BCR-202ENST00000359540 SEC61GP60059 68 aa13.71□□□□□ -0.21
BCR-202ENST00000359540 MRPL55Q7Z7F7 128 aaKnown RBP13.71□□□□□ -0.22
BCR-202ENST00000359540 Q8N3U1 123 aa13.71□□□□□ -0.22
BCR-202ENST00000359540 CFAP46Q8IYW2 2715 aa13.7□□□□□ -0.22
BCR-202ENST00000359540 MGAM2Q2M2H8 2515 aa13.7□□□□□ -0.22
BCR-202ENST00000359540 WFDC13Q8IUB5 93 aa13.69□□□□□ -0.22
BCR-202ENST00000359540 LINC01561Q8N1V8 128 aa13.68□□□□□ -0.22
BCR-202ENST00000359540 Q6ZRU5 148 aa13.68□□□□□ -0.22
BCR-202ENST00000359540 LRCOL1A6NCL2 159 aa13.67□□□□□ -0.22
BCR-202ENST00000359540 X6R8D5 127 aa13.67□□□□□ -0.22
BCR-202ENST00000359540 TRAV7A0A075B6U4 112 aa13.66□□□□□ -0.22
BCR-202ENST00000359540 LOC107984640A0A0U1RRK4 108 aa13.66□□□□□ -0.22
BCR-202ENST00000359540 C10orf25Q5T742 122 aa13.66□□□□□ -0.22
BCR-202ENST00000359540 ATRQ13535 2644 aa13.65□□□□□ -0.22
BCR-202ENST00000359540 Q6ZVQ6 151 aa13.65□□□□□ -0.22
BCR-202ENST00000359540 CASC2Q6XLA1 102 aa13.65□□□□□ -0.22
BCR-202ENST00000359540 LY6G6CO95867 125 aa13.64□□□□□ -0.23
BCR-202ENST00000359540 C1orf137Q5JT78 98 aa13.63□□□□□ -0.23
BCR-202ENST00000359540 NDUFC1O43677 76 aa13.62□□□□□ -0.23
BCR-202ENST00000359540 HELZ2Q9BYK8 2649 aaKnown RBP13.62□□□□□ -0.23
BCR-202ENST00000359540 FAM30AQ9NZY2 134 aa13.62□□□□□ -0.23
BCR-202ENST00000359540 ADGRG4Q8IZF6 3080 aa13.61□□□□□ -0.23
BCR-202ENST00000359540 M0R2N4 97 aa13.6□□□□□ -0.23
BCR-202ENST00000359540 V9GYY9 64 aa13.59□□□□□ -0.23
BCR-202ENST00000359540 CHD6Q8TD26 2715 aa13.59□□□□□ -0.23
BCR-202ENST00000359540 LINC01547P58512 204 aaPredicted RBP13.59□□□□□ -0.23
BCR-202ENST00000359540 A0A096LNT2 108 aa13.58□□□□□ -0.24
BCR-202ENST00000359540 C2orf48Q96LS8 159 aa13.57□□□□□ -0.24
BCR-202ENST00000359540 C6orf48Q9UBA6 75 aa13.57□□□□□ -0.24
BCR-202ENST00000359540 A6NED7 52 aa13.56□□□□□ -0.24
BCR-202ENST00000359540 MAST4O15021 2626 aa13.55□□□□□ -0.24
BCR-202ENST00000359540 SPINK6Q6UWN8 80 aa13.55□□□□□ -0.24
BCR-202ENST00000359540 Q8N9L7 120 aa13.55□□□□□ -0.24
BCR-202ENST00000359540 HRCT1Q6UXD1 115 aa13.55□□□□□ -0.24
BCR-202ENST00000359540 DMXL2Q8TDJ6 3036 aa13.54□□□□□ -0.24
BCR-202ENST00000359540 ATP5EP56381 51 aaPredicted RBP13.53□□□□□ -0.24
BCR-202ENST00000359540 NUPR2A6NF83 97 aa13.53□□□□□ -0.24
BCR-202ENST00000359540 ESRGQ1W209 222 aa13.52□□□□□ -0.24
BCR-202ENST00000359540 ATMQ13315 3056 aa13.51□□□□□ -0.25
BCR-202ENST00000359540 SPATA3Q8NHX4 192 aa13.51□□□□□ -0.25
BCR-202ENST00000359540 PLAC8L1A1L4L8 177 aa13.51□□□□□ -0.25
BCR-202ENST00000359540 REG3GQ6UW15 175 aa13.5□□□□□ -0.25
BCR-202ENST00000359540 CSNK1G2-AS1Q8NCQ2 148 aa13.5□□□□□ -0.25
BCR-202ENST00000359540 KALRNO60229 2985 aa13.5□□□□□ -0.25
BCR-202ENST00000359540 GIG44P09565 113 aaPredicted RBP13.49□□□□□ -0.25
BCR-202ENST00000359540 SMCR5Q8TEV8 140 aa13.49□□□□□ -0.25
BCR-202ENST00000359540 SMIM26A0A096LP01 95 aa13.49□□□□□ -0.25
BCR-202ENST00000359540 TNRC18O15417 2968 aaPredicted RBP13.49□□□□□ -0.25
BCR-202ENST00000359540 IGLV9-49A0A0B4J1Y8 123 aa13.49□□□□□ -0.25
BCR-202ENST00000359540 KRTAP24-1Q3LI83 254 aa13.48□□□□□ -0.25
BCR-202ENST00000359540 DEFB116Q30KQ4 102 aa13.48□□□□□ -0.25
BCR-202ENST00000359540 C7orf33Q8WU49 177 aa13.46□□□□□ -0.25
BCR-202ENST00000359540 Q8NAQ8 132 aa13.46□□□□□ -0.26
BCR-202ENST00000359540 C1orf195Q5TG92 126 aa13.45□□□□□ -0.26
BCR-202ENST00000359540 K7ERS5 55 aa13.45□□□□□ -0.26
BCR-202ENST00000359540 SERP1Q9Y6X1 66 aa13.44□□□□□ -0.26
BCR-202ENST00000359540 A0A087WSZ3 146 aa13.44□□□□□ -0.26
BCR-202ENST00000359540 KIAA0087Q14695 138 aa13.44□□□□□ -0.26
BCR-202ENST00000359540 NHLRC4P0CG21 123 aaPredicted RBP13.44□□□□□ -0.26
BCR-202ENST00000359540 TMEM254Q8TBM7 123 aa13.44□□□□□ -0.26
BCR-202ENST00000359540 CRYGAP11844 174 aa13.43□□□□□ -0.26
BCR-202ENST00000359540 PRLHP81277 87 aa13.42□□□□□ -0.26
BCR-202ENST00000359540 C22orf24Q9Y442 160 aa13.42□□□□□ -0.26
BCR-202ENST00000359540 LINC01556Q5JQF7 62 aa13.42□□□□□ -0.26
BCR-202ENST00000359540 LINC00208Q96KT6 92 aa13.42□□□□□ -0.26
BCR-202ENST00000359540 C19orf73Q9NVV2 129 aa13.42□□□□□ -0.26
BCR-202ENST00000359540 PRYO14603 147 aa13.41□□□□□ -0.26
BCR-202ENST00000359540 CXCL6P80162 114 aa13.41□□□□□ -0.26
BCR-202ENST00000359540 Q6ZQT0 140 aa13.41□□□□□ -0.26
BCR-202ENST00000359540 PRR15LQ9BU68 103 aa13.4□□□□□ -0.26
BCR-202ENST00000359540 USP34Q70CQ2 3546 aa13.4□□□□□ -0.26
BCR-202ENST00000359540 LOC400499M0QZD8 3231 aa13.4□□□□□ -0.26
BCR-202ENST00000359540 F8WDY8 70 aa13.4□□□□□ -0.26
BCR-202ENST00000359540 CFAP47Q6ZTR5 3102 aa13.39□□□□□ -0.27
BCR-202ENST00000359540 Q9BRP9 147 aa13.38□□□□□ -0.27
BCR-202ENST00000359540 IGSF10Q6WRI0 2623 aa13.38□□□□□ -0.27
BCR-202ENST00000359540 ELOF1P60002 83 aaKnown RBP13.37□□□□□ -0.27
BCR-202ENST00000359540 LINC00167Q96N53 147 aa13.37□□□□□ -0.27
BCR-202ENST00000359540 DMXL1Q9Y485 3027 aa13.36□□□□□ -0.27
BCR-202ENST00000359540 FLNCQ14315 2725 aa13.36□□□□□ -0.27
BCR-202ENST00000359540 COL12A1Q99715 3063 aa13.35□□□□□ -0.27
BCR-202ENST00000359540 ZZEF1O43149 2961 aa13.35□□□□□ -0.27
BCR-202ENST00000359540 PMAIP1Q13794 54 aa13.34□□□□□ -0.27
BCR-202ENST00000359540 LINC00474Q9P2X8 69 aa13.34□□□□□ -0.27
BCR-202ENST00000359540 GCN1Q92616 2671 aaKnown RBP13.33□□□□□ -0.28
BCR-202ENST00000359540 LOC110117498A0A087WWA1 95 aa13.3□□□□□ -0.28
BCR-202ENST00000359540 C9orf129Q5T035 196 aaKnown RBP13.3□□□□□ -0.28
BCR-202ENST00000359540 IGLV6-57P01721 117 aa13.3□□□□□ -0.28
BCR-202ENST00000359540 H3BNG1 76 aa13.29□□□□□ -0.28
BCR-202ENST00000359540 LRBAP50851 2863 aa13.29□□□□□ -0.28
BCR-202ENST00000359540 FAM104AQ969W3 186 aa13.29□□□□□ -0.28
BCR-202ENST00000359540 ZNF706Q9Y5V0 76 aaPredicted RBP13.29□□□□□ -0.28
BCR-202ENST00000359540 Q6ZRP5 223 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms