RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 BCE1O60756 84 aa12.62□□□□□ -0.39
SHANK1-202ENST00000359082 ST20-AS1Q8NBB2 130 aa12.61□□□□□ -0.39
SHANK1-202ENST00000359082 NAV3Q8IVL0 2385 aa12.61□□□□□ -0.39
SHANK1-202ENST00000359082 PIEZO1Q92508 2521 aa12.61□□□□□ -0.39
SHANK1-202ENST00000359082 EPM2AB3EWF7 344 aa12.6□□□□□ -0.39
SHANK1-202ENST00000359082 LINC00315P59091 139 aa12.6□□□□□ -0.39
SHANK1-202ENST00000359082 Q6ZQT0 140 aa12.59□□□□□ -0.39
SHANK1-202ENST00000359082 TYMSOSQ8TAI1 123 aa12.59□□□□□ -0.39
SHANK1-202ENST00000359082 Q8NBF4 154 aa12.58□□□□□ -0.39
SHANK1-202ENST00000359082 PRO0461Q9UI25 63 aa12.58□□□□□ -0.39
SHANK1-202ENST00000359082 Q6ZRX8 168 aa12.57□□□□□ -0.4
SHANK1-202ENST00000359082 FAM229AH3BQW9 127 aa12.57□□□□□ -0.4
SHANK1-202ENST00000359082 Q96NJ1 140 aa12.56□□□□□ -0.4
SHANK1-202ENST00000359082 CACNA1AO00555 2505 aa12.55□□□□□ -0.4
SHANK1-202ENST00000359082 ATP11AUNQ6ZP68 121 aa12.54□□□□□ -0.4
SHANK1-202ENST00000359082 HIVEP3Q5T1R4 2406 aa12.53□□□□□ -0.4
SHANK1-202ENST00000359082 IGLV5-45A0A087WSX0 123 aa12.52□□□□□ -0.4
SHANK1-202ENST00000359082 TET2Q6N021 2002 aaPredicted RBP12.52□□□□□ -0.4
SHANK1-202ENST00000359082 SPINT4Q6UDR6 99 aa12.52□□□□□ -0.41
SHANK1-202ENST00000359082 NAV2Q8IVL1 2488 aa12.52□□□□□ -0.41
SHANK1-202ENST00000359082 Q6ZRP5 223 aa12.51□□□□□ -0.41
SHANK1-202ENST00000359082 LOC110117498A0A087WWA1 95 aa12.51□□□□□ -0.41
SHANK1-202ENST00000359082 C16orf90A8MZG2 172 aa12.51□□□□□ -0.41
SHANK1-202ENST00000359082 TM2D3Q9BRN9 247 aa12.51□□□□□ -0.41
SHANK1-202ENST00000359082 NBDYA0A0U1RRE5 68 aa12.49□□□□□ -0.41
SHANK1-202ENST00000359082 H3BNG1 76 aa12.49□□□□□ -0.41
SHANK1-202ENST00000359082 TRAV22A0A0B4J277 110 aa12.49□□□□□ -0.41
SHANK1-202ENST00000359082 LINC00588Q9Y4M8 146 aa12.49□□□□□ -0.41
SHANK1-202ENST00000359082 NCOR2Q9Y618 2525 aa12.48□□□□□ -0.41
SHANK1-202ENST00000359082 FAM168BA1KXE4 195 aa12.47□□□□□ -0.41
SHANK1-202ENST00000359082 H3BPC8 53 aa12.46□□□□□ -0.41
SHANK1-202ENST00000359082 A0A1B0GW54 56 aa12.45□□□□□ -0.42
SHANK1-202ENST00000359082 KRTAP24-1Q3LI83 254 aa12.44□□□□□ -0.42
SHANK1-202ENST00000359082 COL27A1Q8IZC6 1860 aaPredicted RBP12.43□□□□□ -0.42
SHANK1-202ENST00000359082 C8orf87E5RJ46 101 aa12.43□□□□□ -0.42
SHANK1-202ENST00000359082 PTPRBP23467 1997 aa12.42□□□□□ -0.42
SHANK1-202ENST00000359082 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
SHANK1-202ENST00000359082 Q8NAQ8 132 aa12.41□□□□□ -0.42
SHANK1-202ENST00000359082 MYO18BQ8IUG5 2567 aa12.41□□□□□ -0.42
SHANK1-202ENST00000359082 COL4A2P08572 1712 aa12.39□□□□□ -0.43
SHANK1-202ENST00000359082 VPREB1P12018 145 aa12.37□□□□□ -0.43
SHANK1-202ENST00000359082 K7EQZ3 153 aa12.37□□□□□ -0.43
SHANK1-202ENST00000359082 TRBV7-4A0A0J9YYF1 115 aa12.37□□□□□ -0.43
SHANK1-202ENST00000359082 SSBP3-AS1Q7Z2R9 100 aa12.37□□□□□ -0.43
SHANK1-202ENST00000359082 A8MWP4 228 aa12.37□□□□□ -0.43
SHANK1-202ENST00000359082 IGF2RP11717 2491 aa12.36□□□□□ -0.43
SHANK1-202ENST00000359082 LOC101927531A0A1B0GV80 90 aa12.35□□□□□ -0.43
SHANK1-202ENST00000359082 DOPEY1Q5JWR5 2465 aa12.34□□□□□ -0.43
SHANK1-202ENST00000359082 J3QL48 77 aa12.34□□□□□ -0.43
SHANK1-202ENST00000359082 CCDC168Q8NDH2 2452 aa12.33□□□□□ -0.44
SHANK1-202ENST00000359082 COA5Q86WW8 74 aa12.33□□□□□ -0.44
SHANK1-202ENST00000359082 MRPL34Q9BQ48 92 aaKnown RBP12.33□□□□□ -0.44
SHANK1-202ENST00000359082 MUC4Q99102 2169 aa12.33□□□□□ -0.44
SHANK1-202ENST00000359082 DSCR10P59022 87 aa12.32□□□□□ -0.44
SHANK1-202ENST00000359082 APLNQ9ULZ1 77 aa12.32□□□□□ -0.44
SHANK1-202ENST00000359082 IGLV6-57P01721 117 aa12.31□□□□□ -0.44
SHANK1-202ENST00000359082 LINC01600Q96MT4 127 aa12.31□□□□□ -0.44
SHANK1-202ENST00000359082 ABCA2Q9BZC7 2435 aa12.3□□□□□ -0.44
SHANK1-202ENST00000359082 LITAFQ99732 161 aa12.3□□□□□ -0.44
SHANK1-202ENST00000359082 IGLV1-50A0A075B6I6 118 aa12.28□□□□□ -0.44
SHANK1-202ENST00000359082 COX6B2Q6YFQ2 88 aa12.28□□□□□ -0.44
SHANK1-202ENST00000359082 C9orf92A6NGG3 77 aa12.28□□□□□ -0.44
SHANK1-202ENST00000359082 DNAH10OSP0CZ25 163 aa12.27□□□□□ -0.45
SHANK1-202ENST00000359082 A8MUN3 132 aa12.26□□□□□ -0.45
SHANK1-202ENST00000359082 WWC2-AS2Q96NR7 200 aa12.24□□□□□ -0.45
SHANK1-202ENST00000359082 PIEZO2Q9H5I5 2752 aa12.24□□□□□ -0.45
SHANK1-202ENST00000359082 ERC2-IT1O76042 136 aa12.23□□□□□ -0.45
SHANK1-202ENST00000359082 CYP4F30PQ9H0H9 118 aa12.23□□□□□ -0.45
SHANK1-202ENST00000359082 IGFL1Q6UW32 110 aa12.22□□□□□ -0.45
SHANK1-202ENST00000359082 OBSCN-AS1Q96MR7 158 aa12.21□□□□□ -0.46
SHANK1-202ENST00000359082 MYO9AB2RTY4 2548 aa12.2□□□□□ -0.46
SHANK1-202ENST00000359082 C8orf17Q9NRJ1 99 aa12.18□□□□□ -0.46
SHANK1-202ENST00000359082 A0A0G2JQZ4 141 aa12.17□□□□□ -0.46
SHANK1-202ENST00000359082 A0A1W2PNN7 141 aa12.17□□□□□ -0.46
SHANK1-202ENST00000359082 UQCR11O14957 56 aa12.17□□□□□ -0.46
SHANK1-202ENST00000359082 KCNQ1DNQ9H478 68 aa12.17□□□□□ -0.46
SHANK1-202ENST00000359082 KRTAP10-11P60412 298 aa12.17□□□□□ -0.46
SHANK1-202ENST00000359082 LINC00304Q8N9R0 145 aa12.17□□□□□ -0.46
SHANK1-202ENST00000359082 CRIPTQ9P021 101 aa12.15□□□□□ -0.46
SHANK1-202ENST00000359082 MIR22HGQ0VDD5 57 aa12.15□□□□□ -0.46
SHANK1-202ENST00000359082 UTRNP46939 3433 aa12.14□□□□□ -0.47
SHANK1-202ENST00000359082 C15orf56Q8N910 161 aa12.12□□□□□ -0.47
SHANK1-202ENST00000359082 LINC00528Q8N1L1 170 aa12.12□□□□□ -0.47
SHANK1-202ENST00000359082 CSNK1G2-AS1Q8NCQ2 148 aa12.12□□□□□ -0.47
SHANK1-202ENST00000359082 A0A1B0GVX0 72 aa12.11□□□□□ -0.47
SHANK1-202ENST00000359082 C9orf129Q5T035 196 aaKnown RBP12.11□□□□□ -0.47
SHANK1-202ENST00000359082 PRR15Q8IV56 129 aa12.11□□□□□ -0.47
SHANK1-202ENST00000359082 ANAPC11Q9NYG5 84 aa12.1□□□□□ -0.47
SHANK1-202ENST00000359082 SMR3BP02814 79 aaPredicted RBP12.09□□□□□ -0.47
SHANK1-202ENST00000359082 TLN1Q9Y490 2541 aaKnown RBP12.09□□□□□ -0.47
SHANK1-202ENST00000359082 KLKP1Q107X0 134 aa12.08□□□□□ -0.47
SHANK1-202ENST00000359082 LINC00336Q6ZUF6 198 aa12.08□□□□□ -0.48
SHANK1-202ENST00000359082 ZNF861PO60384 105 aa12.07□□□□□ -0.48
SHANK1-202ENST00000359082 EIF4EBP3O60516 100 aaPredicted RBP12.07□□□□□ -0.48
SHANK1-202ENST00000359082 Q8N377 158 aa12.07□□□□□ -0.48
SHANK1-202ENST00000359082 K7EIL1 84 aa12.06□□□□□ -0.48
SHANK1-202ENST00000359082 CD164Q04900 197 aa12.06□□□□□ -0.48
SHANK1-202ENST00000359082 PCSK5Q92824 1860 aa12.05□□□□□ -0.48
SHANK1-202ENST00000359082 KLK9Q2XQG4 91 aa12.05□□□□□ -0.48
SHANK1-202ENST00000359082 IGLV5-37A0A075B6J1 123 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms