RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 DPH3Q96FX2 82 aa7.68□□□□□ -1.18
SSU72-202ENST00000359060 hADV29S1A0JD25 119 aa7.68□□□□□ -1.18
SSU72-202ENST00000359060 JMJD7-PLA2G4BH0Y9G9 81 aa7.68□□□□□ -1.18
SSU72-202ENST00000359060 UBE2DNLQ8IWF7 75 aa7.68□□□□□ -1.18
SSU72-202ENST00000359060 C10orf25Q5T742 122 aa7.68□□□□□ -1.18
SSU72-202ENST00000359060 DEFB105AQ8NG35 78 aa7.67□□□□□ -1.18
SSU72-202ENST00000359060 FAM240AA0A1B0GVK7 77 aa7.67□□□□□ -1.18
SSU72-202ENST00000359060 PSCAO43653 123 aa7.67□□□□□ -1.18
SSU72-202ENST00000359060 AKAP9Q99996 3911 aa7.67□□□□□ -1.18
SSU72-202ENST00000359060 RBM3P98179 157 aaKnown RBP7.66□□□□□ -1.18
SSU72-202ENST00000359060 LINC00612Q8N6U2 182 aa7.66□□□□□ -1.18
SSU72-202ENST00000359060 NBEAL1Q6ZS30 2694 aa7.66□□□□□ -1.18
SSU72-202ENST00000359060 Q6ZQY7 126 aa7.66□□□□□ -1.18
SSU72-202ENST00000359060 COX7BP24311 80 aa7.64□□□□□ -1.19
SSU72-202ENST00000359060 Q8N814 137 aa7.64□□□□□ -1.19
SSU72-202ENST00000359060 KLK5Q9Y337 293 aaPredicted RBP7.64□□□□□ -1.19
SSU72-202ENST00000359060 TRBV10-3A0A0K0K1G6 114 aa7.63□□□□□ -1.19
SSU72-202ENST00000359060 WFDC9Q8NEX5 89 aa7.63□□□□□ -1.19
SSU72-202ENST00000359060 TRAV23DV6A0A075B6W5 121 aa7.63□□□□□ -1.19
SSU72-202ENST00000359060 CCDC179H3BU77 68 aa7.63□□□□□ -1.19
SSU72-202ENST00000359060 LINC01561Q8N1V8 128 aa7.63□□□□□ -1.19
SSU72-202ENST00000359060 SYCNQ0VAF6 134 aa7.63□□□□□ -1.19
SSU72-202ENST00000359060 A0A1B0GX51 115 aa7.62□□□□□ -1.19
SSU72-202ENST00000359060 KRTAP24-1Q3LI83 254 aa7.62□□□□□ -1.19
SSU72-202ENST00000359060 NBPF19A0A087WUL8 3843 aa7.62□□□□□ -1.19
SSU72-202ENST00000359060 NDUFC2O95298 119 aa7.62□□□□□ -1.19
SSU72-202ENST00000359060 ENHOQ6UWT2 76 aa7.61□□□□□ -1.19
SSU72-202ENST00000359060 RMI2Q96E14 147 aa7.61□□□□□ -1.19
SSU72-202ENST00000359060 KIAA0087Q14695 138 aa7.6□□□□□ -1.19
SSU72-202ENST00000359060 ESRGQ1W209 222 aa7.6□□□□□ -1.19
SSU72-202ENST00000359060 Q6Q795 121 aa7.6□□□□□ -1.19
SSU72-202ENST00000359060 ZNF73O43830 326 aaPredicted RBP7.6□□□□□ -1.19
SSU72-202ENST00000359060 Q6ZRU5 148 aa7.59□□□□□ -1.19
SSU72-202ENST00000359060 LINC00846Q9NV44 126 aa7.59□□□□□ -1.19
SSU72-202ENST00000359060 ETDCA0A1B0GVM5 59 aa7.59□□□□□ -1.19
SSU72-202ENST00000359060 C6orf48Q9UBA6 75 aa7.59□□□□□ -1.2
SSU72-202ENST00000359060 TRAV10A0A0B4J240 114 aa7.58□□□□□ -1.2
SSU72-202ENST00000359060 A0A087WVE0 104 aa7.58□□□□□ -1.2
SSU72-202ENST00000359060 ATOX1O00244 68 aa7.58□□□□□ -1.2
SSU72-202ENST00000359060 IMUPQ9GZP8 106 aa7.58□□□□□ -1.2
SSU72-202ENST00000359060 VWFP04275 2813 aa7.58□□□□□ -1.2
SSU72-202ENST00000359060 KRTAP10-11P60412 298 aa7.57□□□□□ -1.2
SSU72-202ENST00000359060 EGFEM1PQ0D2K5 195 aa7.57□□□□□ -1.2
SSU72-202ENST00000359060 PDZD2O15018 2839 aa7.57□□□□□ -1.2
SSU72-202ENST00000359060 UBE2BP63146 152 aa7.57□□□□□ -1.2
SSU72-202ENST00000359060 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
SSU72-202ENST00000359060 M0R378 163 aa7.56□□□□□ -1.2
SSU72-202ENST00000359060 LINC00575Q6W349 94 aa7.56□□□□□ -1.2
SSU72-202ENST00000359060 CCKP06307 115 aa7.56□□□□□ -1.2
SSU72-202ENST00000359060 MUC7Q8TAX7 377 aa7.56□□□□□ -1.2
SSU72-202ENST00000359060 TENM1Q9UKZ4 2725 aa7.56□□□□□ -1.2
SSU72-202ENST00000359060 SCXQ7RTU7 201 aa7.56□□□□□ -1.2
SSU72-202ENST00000359060 RPL37AP8A6NKH3 93 aa7.55□□□□□ -1.2
SSU72-202ENST00000359060 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
SSU72-202ENST00000359060 SMCR5Q8TEV8 140 aa7.55□□□□□ -1.2
SSU72-202ENST00000359060 NDUFC2-KCTD14E9PQ53 114 aa7.54□□□□□ -1.2
SSU72-202ENST00000359060 FAM19A5Q7Z5A7 132 aaPredicted RBP7.54□□□□□ -1.2
SSU72-202ENST00000359060 OTOGQ6ZRI0 2925 aa7.54□□□□□ -1.2
SSU72-202ENST00000359060 PPDPFQ9H3Y8 114 aa7.53□□□□□ -1.2
SSU72-202ENST00000359060 TRBV7-7A0A0K0K1E9 115 aa7.53□□□□□ -1.2
SSU72-202ENST00000359060 UPK3BQ9BT76 320 aa7.53□□□□□ -1.2
SSU72-202ENST00000359060 PRR34Q9NV39 138 aa7.53□□□□□ -1.2
SSU72-202ENST00000359060 F8WEM9 126 aa7.52□□□□□ -1.21
SSU72-202ENST00000359060 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.52□□□□□ -1.21
SSU72-202ENST00000359060 USP17L23D6RBM5 183 aa7.52□□□□□ -1.21
SSU72-202ENST00000359060 Q6JHZ5 121 aa7.52□□□□□ -1.21
SSU72-202ENST00000359060 UQCRQO14949 82 aa7.51□□□□□ -1.21
SSU72-202ENST00000359060 PDE6GP18545 87 aa7.51□□□□□ -1.21
SSU72-202ENST00000359060 H3BQ85 93 aa7.51□□□□□ -1.21
SSU72-202ENST00000359060 NREPQ16612 68 aa7.5□□□□□ -1.21
SSU72-202ENST00000359060 LINC01556Q5JQF7 62 aa7.5□□□□□ -1.21
SSU72-202ENST00000359060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.5□□□□□ -1.21
SSU72-202ENST00000359060 C3orf22Q8N5N4 141 aa7.5□□□□□ -1.21
SSU72-202ENST00000359060 C2orf48Q96LS8 159 aa7.49□□□□□ -1.21
SSU72-202ENST00000359060 H3BNG1 76 aa7.49□□□□□ -1.21
SSU72-202ENST00000359060 FAM19A1Q7Z5A9 133 aa7.49□□□□□ -1.21
SSU72-202ENST00000359060 LINC01600Q96MT4 127 aa7.49□□□□□ -1.21
SSU72-202ENST00000359060 C3orf84H3BNL1 204 aa7.48□□□□□ -1.21
SSU72-202ENST00000359060 NHLRC4P0CG21 123 aaPredicted RBP7.48□□□□□ -1.21
SSU72-202ENST00000359060 FUSP35637 526 aaKnown RBP eCLIP7.48□□□□□ -1.218e-7■□□□□ 11.3
SSU72-202ENST00000359060 ZNF469Q96JG9 3925 aaPredicted RBP7.48□□□□□ -1.21
SSU72-202ENST00000359060 HIGD2AQ9BW72 106 aa7.47□□□□□ -1.21
SSU72-202ENST00000359060 ATP5EP2Q5VTU8 51 aa7.46□□□□□ -1.21
SSU72-202ENST00000359060 COX7CP15954 63 aa7.46□□□□□ -1.22
SSU72-202ENST00000359060 IGLV6-57P01721 117 aa7.46□□□□□ -1.22
SSU72-202ENST00000359060 Q8NDZ9 215 aa7.46□□□□□ -1.22
SSU72-202ENST00000359060 Q6ZRP5 223 aa7.45□□□□□ -1.22
SSU72-202ENST00000359060 C20orf197Q8N268 126 aa7.45□□□□□ -1.22
SSU72-202ENST00000359060 GVQW2A0A096LPI5 108 aaPredicted RBP7.45□□□□□ -1.22
SSU72-202ENST00000359060 BAHCC1Q9P281 2608 aa7.45□□□□□ -1.22
SSU72-202ENST00000359060 VPREB1P12018 145 aa7.44□□□□□ -1.22
SSU72-202ENST00000359060 SERP2Q8N6R1 65 aa7.44□□□□□ -1.22
SSU72-202ENST00000359060 C15orf56Q8N910 161 aa7.44□□□□□ -1.22
SSU72-202ENST00000359060 LINC00588Q9Y4M8 146 aa7.44□□□□□ -1.22
SSU72-202ENST00000359060 C7orf33Q8WU49 177 aa7.43□□□□□ -1.22
SSU72-202ENST00000359060 KMT2BQ9UMN6 2715 aaPredicted RBP7.43□□□□□ -1.22
SSU72-202ENST00000359060 BPY2O14599 106 aa7.42□□□□□ -1.22
SSU72-202ENST00000359060 Q6ZVQ6 151 aa7.42□□□□□ -1.22
SSU72-202ENST00000359060 LOC107984640A0A0U1RRK4 108 aa7.42□□□□□ -1.22
SSU72-202ENST00000359060 ELOF1P60002 83 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms