RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ST20-AS1Q8NBB2 130 aa10.18□□□□□ -0.78
LMX1B-201ENST00000355497 Q96NJ1 140 aa10.18□□□□□ -0.78
LMX1B-201ENST00000355497 RTL8CO15255 209 aa10.18□□□□□ -0.78
LMX1B-201ENST00000355497 LOC101927531A0A1B0GV80 90 aa10.17□□□□□ -0.78
LMX1B-201ENST00000355497 CHTF8P0CG12 524 aa10.17□□□□□ -0.78
LMX1B-201ENST00000355497 Q6ZRP5 223 aa10.17□□□□□ -0.78
LMX1B-201ENST00000355497 CRIPTQ9P021 101 aa10.17□□□□□ -0.78
LMX1B-201ENST00000355497 APLNQ9ULZ1 77 aa10.16□□□□□ -0.78
LMX1B-201ENST00000355497 SPG11Q96JI7 2443 aa10.16□□□□□ -0.78
LMX1B-201ENST00000355497 C16orf90A8MZG2 172 aa10.16□□□□□ -0.78
LMX1B-201ENST00000355497 FAM229AH3BQW9 127 aa10.16□□□□□ -0.78
LMX1B-201ENST00000355497 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
LMX1B-201ENST00000355497 CPAMD8Q8IZJ3 1885 aa10.16□□□□□ -0.78
LMX1B-201ENST00000355497 ACACBO00763 2458 aa10.15□□□□□ -0.78
LMX1B-201ENST00000355497 AGRNO00468 2067 aa10.14□□□□□ -0.79
LMX1B-201ENST00000355497 COL5A1P20908 1838 aaPredicted RBP10.13□□□□□ -0.79
LMX1B-201ENST00000355497 COA5Q86WW8 74 aa10.13□□□□□ -0.79
LMX1B-201ENST00000355497 PTPRSQ13332 1948 aa10.13□□□□□ -0.79
LMX1B-201ENST00000355497 TRBV7-4A0A0J9YYF1 115 aa10.12□□□□□ -0.79
LMX1B-201ENST00000355497 A8MWP4 228 aa10.11□□□□□ -0.79
LMX1B-201ENST00000355497 NAV3Q8IVL0 2385 aa10.1□□□□□ -0.79
LMX1B-201ENST00000355497 GVQW2A0A096LPI5 108 aaPredicted RBP10.1□□□□□ -0.79
LMX1B-201ENST00000355497 CYP4F30PQ9H0H9 118 aa10.1□□□□□ -0.79
LMX1B-201ENST00000355497 NBDYA0A0U1RRE5 68 aa10.1□□□□□ -0.79
LMX1B-201ENST00000355497 HIVEP3Q5T1R4 2406 aa10.1□□□□□ -0.79
LMX1B-201ENST00000355497 UQCR11O14957 56 aa10.09□□□□□ -0.79
LMX1B-201ENST00000355497 A8MUN3 132 aa10.09□□□□□ -0.79
LMX1B-201ENST00000355497 MRPL34Q9BQ48 92 aaKnown RBP10.08□□□□□ -0.8
LMX1B-201ENST00000355497 ADAMTS20P59510 1910 aa10.08□□□□□ -0.8
LMX1B-201ENST00000355497 SONP18583 2426 aaKnown RBP10.08□□□□□ -0.8
LMX1B-201ENST00000355497 NOTCH2Q04721 2471 aa10.08□□□□□ -0.8
LMX1B-201ENST00000355497 CUL9Q8IWT3 2517 aa10.07□□□□□ -0.8
LMX1B-201ENST00000355497 PTPN13Q12923 2485 aa10.07□□□□□ -0.8
LMX1B-201ENST00000355497 ERC2-IT1O76042 136 aa10.07□□□□□ -0.8
LMX1B-201ENST00000355497 K7EQZ3 153 aa10.06□□□□□ -0.8
LMX1B-201ENST00000355497 MIR22HGQ0VDD5 57 aa10.06□□□□□ -0.8
LMX1B-201ENST00000355497 LINC00588Q9Y4M8 146 aa10.06□□□□□ -0.8
LMX1B-201ENST00000355497 IGLV6-57P01721 117 aa10.04□□□□□ -0.8
LMX1B-201ENST00000355497 BDP1A6H8Y1 2624 aa10.02□□□□□ -0.81
LMX1B-201ENST00000355497 LITAFQ99732 161 aa10.02□□□□□ -0.81
LMX1B-201ENST00000355497 ATRXP46100 2492 aa10.01□□□□□ -0.81
LMX1B-201ENST00000355497 Q8NAQ8 132 aa10.01□□□□□ -0.81
LMX1B-201ENST00000355497 NAV2Q8IVL1 2488 aa10.01□□□□□ -0.81
LMX1B-201ENST00000355497 COX6B2Q6YFQ2 88 aa10.01□□□□□ -0.81
LMX1B-201ENST00000355497 FAM168BA1KXE4 195 aa10.01□□□□□ -0.81
LMX1B-201ENST00000355497 IGLV1-50A0A075B6I6 118 aa9.98□□□□□ -0.81
LMX1B-201ENST00000355497 C2CD3Q4AC94 2353 aa9.96□□□□□ -0.81
LMX1B-201ENST00000355497 DSCR10P59022 87 aa9.96□□□□□ -0.82
LMX1B-201ENST00000355497 DNAH10OSP0CZ25 163 aa9.95□□□□□ -0.82
LMX1B-201ENST00000355497 CD164Q04900 197 aa9.95□□□□□ -0.82
LMX1B-201ENST00000355497 C8orf17Q9NRJ1 99 aa9.94□□□□□ -0.82
LMX1B-201ENST00000355497 J3QL48 77 aa9.94□□□□□ -0.82
LMX1B-201ENST00000355497 C9orf129Q5T035 196 aaKnown RBP9.94□□□□□ -0.82
LMX1B-201ENST00000355497 KCNQ1DNQ9H478 68 aa9.94□□□□□ -0.82
LMX1B-201ENST00000355497 CACNA1AO00555 2505 aa9.94□□□□□ -0.82
LMX1B-201ENST00000355497 IGFL1Q6UW32 110 aa9.93□□□□□ -0.82
LMX1B-201ENST00000355497 KRTAP24-1Q3LI83 254 aa9.92□□□□□ -0.82
LMX1B-201ENST00000355497 LCA10Q71F78 164 aa9.91□□□□□ -0.82
LMX1B-201ENST00000355497 KTN1-AS1Q86SY8 53 aa9.91□□□□□ -0.82
LMX1B-201ENST00000355497 PRR15Q8IV56 129 aa9.91□□□□□ -0.82
LMX1B-201ENST00000355497 TET2Q6N021 2002 aaPredicted RBP9.9□□□□□ -0.82
LMX1B-201ENST00000355497 CDC42SE1Q9NRR8 79 aa9.9□□□□□ -0.82
LMX1B-201ENST00000355497 LINC00528Q8N1L1 170 aa9.9□□□□□ -0.83
LMX1B-201ENST00000355497 A0A1B0GVX0 72 aa9.89□□□□□ -0.83
LMX1B-201ENST00000355497 EP400Q96L91 3159 aa9.89□□□□□ -0.83
LMX1B-201ENST00000355497 PTPRBP23467 1997 aa9.87□□□□□ -0.83
LMX1B-201ENST00000355497 OBSCN-AS1Q96MR7 158 aa9.87□□□□□ -0.83
LMX1B-201ENST00000355497 KLKP1Q107X0 134 aa9.87□□□□□ -0.83
LMX1B-201ENST00000355497 LINC00304Q8N9R0 145 aa9.87□□□□□ -0.83
LMX1B-201ENST00000355497 LINC01554Q52M75 96 aa9.86□□□□□ -0.83
LMX1B-201ENST00000355497 C9orf92A6NGG3 77 aa9.86□□□□□ -0.83
LMX1B-201ENST00000355497 MUC4Q99102 2169 aa9.86□□□□□ -0.83
LMX1B-201ENST00000355497 WWC2-AS2Q96NR7 200 aa9.86□□□□□ -0.83
LMX1B-201ENST00000355497 TTC28Q96AY4 2481 aa9.84□□□□□ -0.83
LMX1B-201ENST00000355497 A0A0D9SG42 100 aa9.83□□□□□ -0.84
LMX1B-201ENST00000355497 LUZP6Q538Z0 58 aa9.83□□□□□ -0.84
LMX1B-201ENST00000355497 ABCA2Q9BZC7 2435 aa9.82□□□□□ -0.84
LMX1B-201ENST00000355497 CCDC168Q8NDH2 2452 aa9.82□□□□□ -0.84
LMX1B-201ENST00000355497 KLK9Q2XQG4 91 aa9.82□□□□□ -0.84
LMX1B-201ENST00000355497 COL27A1Q8IZC6 1860 aaPredicted RBP9.81□□□□□ -0.84
LMX1B-201ENST00000355497 ZNF861PO60384 105 aa9.81□□□□□ -0.84
LMX1B-201ENST00000355497 Q8N377 158 aa9.8□□□□□ -0.84
LMX1B-201ENST00000355497 IGLV5-37A0A075B6J1 123 aa9.8□□□□□ -0.84
LMX1B-201ENST00000355497 COL4A2P08572 1712 aa9.8□□□□□ -0.84
LMX1B-201ENST00000355497 C15orf56Q8N910 161 aa9.8□□□□□ -0.84
LMX1B-201ENST00000355497 LINC00336Q6ZUF6 198 aa9.79□□□□□ -0.84
LMX1B-201ENST00000355497 CSNK1G2-AS1Q8NCQ2 148 aa9.78□□□□□ -0.84
LMX1B-201ENST00000355497 RBM12B-AS1Q9P1G2 102 aa9.77□□□□□ -0.85
LMX1B-201ENST00000355497 H7BZZ5 65 aa9.76□□□□□ -0.85
LMX1B-201ENST00000355497 MYO18BQ8IUG5 2567 aa9.76□□□□□ -0.85
LMX1B-201ENST00000355497 PRR34Q9NV39 138 aa9.75□□□□□ -0.85
LMX1B-201ENST00000355497 PLA2G2DQ9UNK4 145 aa9.75□□□□□ -0.85
LMX1B-201ENST00000355497 A0A0G2JQZ4 141 aa9.75□□□□□ -0.85
LMX1B-201ENST00000355497 A0A1W2PNN7 141 aa9.75□□□□□ -0.85
LMX1B-201ENST00000355497 EIF4EBP3O60516 100 aaPredicted RBP9.75□□□□□ -0.85
LMX1B-201ENST00000355497 FAM104AQ969W3 186 aa9.74□□□□□ -0.85
LMX1B-201ENST00000355497 DOPEY1Q5JWR5 2465 aa9.74□□□□□ -0.85
LMX1B-201ENST00000355497 TLX1NBP0CAT3 122 aa9.73□□□□□ -0.85
LMX1B-201ENST00000355497 SPANXA2-OT1Q8N9U9 137 aa9.7□□□□□ -0.86
LMX1B-201ENST00000355497 IGLV5-48A0A075B6I7 105 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms