RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 C6orf48Q9UBA6 75 aa10.64□□□□□ -0.71
PTPRO-202ENST00000348962 TRBV7-6A0A0J9YX20 115 aa10.64□□□□□ -0.71
PTPRO-202ENST00000348962 RTL8CO15255 209 aa10.64□□□□□ -0.71
PTPRO-202ENST00000348962 DEFB116Q30KQ4 102 aa10.62□□□□□ -0.71
PTPRO-202ENST00000348962 LINC00588Q9Y4M8 146 aa10.62□□□□□ -0.71
PTPRO-202ENST00000348962 SPACA4Q8TDM5 124 aa10.62□□□□□ -0.71
PTPRO-202ENST00000348962 Q6ZRP5 223 aa10.61□□□□□ -0.71
PTPRO-202ENST00000348962 CRYGAP11844 174 aa10.61□□□□□ -0.71
PTPRO-202ENST00000348962 Q6Q795 121 aa10.6□□□□□ -0.71
PTPRO-202ENST00000348962 MOBPQ13875 183 aa10.6□□□□□ -0.71
PTPRO-202ENST00000348962 A0A087WVE0 104 aa10.59□□□□□ -0.71
PTPRO-202ENST00000348962 KIAA0087Q14695 138 aa10.59□□□□□ -0.71
PTPRO-202ENST00000348962 PCOTHQ58A44 107 aa10.58□□□□□ -0.72
PTPRO-202ENST00000348962 MAST4O15021 2626 aa10.58□□□□□ -0.72
PTPRO-202ENST00000348962 HCG22E2RYF7 251 aa10.58□□□□□ -0.72
PTPRO-202ENST00000348962 IGLV5-45A0A087WSX0 123 aa10.57□□□□□ -0.72
PTPRO-202ENST00000348962 H0Y9P7 68 aa10.57□□□□□ -0.72
PTPRO-202ENST00000348962 KLK9Q2XQG4 91 aa10.57□□□□□ -0.72
PTPRO-202ENST00000348962 SPINK1P00995 79 aa10.56□□□□□ -0.72
PTPRO-202ENST00000348962 LINC01546A6NGU7 62 aa10.56□□□□□ -0.72
PTPRO-202ENST00000348962 PTPRBP23467 1997 aa10.55□□□□□ -0.72
PTPRO-202ENST00000348962 PHF5AQ7RTV0 110 aaKnown RBP10.55□□□□□ -0.72
PTPRO-202ENST00000348962 ATRQ13535 2644 aa10.54□□□□□ -0.72
PTPRO-202ENST00000348962 DNAH10OSP0CZ25 163 aa10.53□□□□□ -0.72
PTPRO-202ENST00000348962 IGKV2D-30A0A075B6S6 120 aa10.53□□□□□ -0.72
PTPRO-202ENST00000348962 PLA2G1BP04054 148 aaKnown RBP10.53□□□□□ -0.72
PTPRO-202ENST00000348962 IGKV2-30P06310 120 aa10.53□□□□□ -0.72
PTPRO-202ENST00000348962 TYMSOSQ8TAI1 123 aa10.53□□□□□ -0.72
PTPRO-202ENST00000348962 Q9UF83 564 aa10.53□□□□□ -0.72
PTPRO-202ENST00000348962 TRBV7-7A0A0K0K1E9 115 aa10.52□□□□□ -0.73
PTPRO-202ENST00000348962 GVQW2A0A096LPI5 108 aaPredicted RBP10.52□□□□□ -0.73
PTPRO-202ENST00000348962 SPATA3Q8NHX4 192 aa10.52□□□□□ -0.73
PTPRO-202ENST00000348962 LINC00846Q9NV44 126 aa10.51□□□□□ -0.73
PTPRO-202ENST00000348962 K7EIL1 84 aa10.51□□□□□ -0.73
PTPRO-202ENST00000348962 Q8NBF4 154 aa10.5□□□□□ -0.73
PTPRO-202ENST00000348962 SMIM26A0A096LP01 95 aa10.5□□□□□ -0.73
PTPRO-202ENST00000348962 A0A1B0GW54 56 aa10.5□□□□□ -0.73
PTPRO-202ENST00000348962 CCDC179H3BU77 68 aa10.5□□□□□ -0.73
PTPRO-202ENST00000348962 hDV103S1A0JD37 113 aa10.49□□□□□ -0.73
PTPRO-202ENST00000348962 Q6ZRX8 168 aa10.49□□□□□ -0.73
PTPRO-202ENST00000348962 EPM2AB3EWF7 344 aa10.49□□□□□ -0.73
PTPRO-202ENST00000348962 ELOF1P60002 83 aaKnown RBP10.49□□□□□ -0.73
PTPRO-202ENST00000348962 CXCL6P80162 114 aa10.49□□□□□ -0.73
PTPRO-202ENST00000348962 J3QL48 77 aa10.48□□□□□ -0.73
PTPRO-202ENST00000348962 TP53AIP1Q9HCN2 124 aa10.46□□□□□ -0.73
PTPRO-202ENST00000348962 A0A096LNT2 108 aa10.46□□□□□ -0.74
PTPRO-202ENST00000348962 TMEM254Q8TBM7 123 aa10.46□□□□□ -0.74
PTPRO-202ENST00000348962 BCE1O60756 84 aa10.45□□□□□ -0.74
PTPRO-202ENST00000348962 C1orf64Q8NEQ6 169 aa10.45□□□□□ -0.74
PTPRO-202ENST00000348962 COL27A1Q8IZC6 1860 aaPredicted RBP10.45□□□□□ -0.74
PTPRO-202ENST00000348962 A0A0U1RQV1 116 aa10.45□□□□□ -0.74
PTPRO-202ENST00000348962 CHTF8P0CG12 524 aa10.44□□□□□ -0.74
PTPRO-202ENST00000348962 C19orf73Q9NVV2 129 aa10.44□□□□□ -0.74
PTPRO-202ENST00000348962 KRTAP10-11P60412 298 aa10.43□□□□□ -0.74
PTPRO-202ENST00000348962 RPL37AP61513 92 aaKnown RBP10.42□□□□□ -0.74
PTPRO-202ENST00000348962 LINC00476Q8WZB0 136 aa10.42□□□□□ -0.74
PTPRO-202ENST00000348962 SOSTDC1Q6X4U4 206 aa10.42□□□□□ -0.74
PTPRO-202ENST00000348962 CSNK1G2-AS1Q8NCQ2 148 aa10.42□□□□□ -0.74
PTPRO-202ENST00000348962 HELZ2Q9BYK8 2649 aaKnown RBP10.39□□□□□ -0.75
PTPRO-202ENST00000348962 LINC00313P59037 77 aa10.39□□□□□ -0.75
PTPRO-202ENST00000348962 PRRC2CQ9Y520 2896 aaKnown RBP10.39□□□□□ -0.75
PTPRO-202ENST00000348962 C7orf65Q6ZTY9 151 aa10.38□□□□□ -0.75
PTPRO-202ENST00000348962 SMIM29Q86T20 159 aa10.37□□□□□ -0.75
PTPRO-202ENST00000348962 ST20-AS1Q8NBB2 130 aa10.35□□□□□ -0.75
PTPRO-202ENST00000348962 VPREB1P12018 145 aa10.35□□□□□ -0.75
PTPRO-202ENST00000348962 ATP11AUNQ6ZP68 121 aa10.35□□□□□ -0.75
PTPRO-202ENST00000348962 FAM218AQ96MZ4 157 aa10.33□□□□□ -0.76
PTPRO-202ENST00000348962 TM2D3Q9BRN9 247 aa10.32□□□□□ -0.76
PTPRO-202ENST00000348962 KRTAP10-3P60369 221 aa10.31□□□□□ -0.76
PTPRO-202ENST00000348962 ACYP2P14621 99 aa10.31□□□□□ -0.76
PTPRO-202ENST00000348962 PCSK5Q92824 1860 aa10.3□□□□□ -0.76
PTPRO-202ENST00000348962 LOC110117498A0A087WWA1 95 aa10.3□□□□□ -0.76
PTPRO-202ENST00000348962 PRR34Q9NV39 138 aa10.3□□□□□ -0.76
PTPRO-202ENST00000348962 Q6ZQT0 140 aa10.29□□□□□ -0.76
PTPRO-202ENST00000348962 LINC00336Q6ZUF6 198 aa10.29□□□□□ -0.76
PTPRO-202ENST00000348962 Q96NJ1 140 aa10.29□□□□□ -0.76
PTPRO-202ENST00000348962 A0A087WTM6 91 aa10.29□□□□□ -0.76
PTPRO-202ENST00000348962 FAM168BA1KXE4 195 aa10.28□□□□□ -0.76
PTPRO-202ENST00000348962 IGLV6-57P01721 117 aa10.28□□□□□ -0.76
PTPRO-202ENST00000348962 TRBV7-4A0A0J9YYF1 115 aa10.28□□□□□ -0.76
PTPRO-202ENST00000348962 C8orf87E5RJ46 101 aa10.27□□□□□ -0.76
PTPRO-202ENST00000348962 IGLV1-50A0A075B6I6 118 aa10.27□□□□□ -0.77
PTPRO-202ENST00000348962 H3BPC8 53 aa10.27□□□□□ -0.77
PTPRO-202ENST00000348962 DNAH12Q6ZR08 3092 aa10.27□□□□□ -0.77
PTPRO-202ENST00000348962 PSPHP1O15172 72 aa10.26□□□□□ -0.77
PTPRO-202ENST00000348962 GIG44P09565 113 aaPredicted RBP10.26□□□□□ -0.77
PTPRO-202ENST00000348962 SERTAD4-AS1Q5TG53 156 aa10.26□□□□□ -0.77
PTPRO-202ENST00000348962 FLNAP21333 2647 aaKnown RBP10.26□□□□□ -0.77
PTPRO-202ENST00000348962 TRAV22A0A0B4J277 110 aa10.26□□□□□ -0.77
PTPRO-202ENST00000348962 SPAG11AQ6PDA7 123 aa10.26□□□□□ -0.77
PTPRO-202ENST00000348962 KCNQ1DNQ9H478 68 aa10.26□□□□□ -0.77
PTPRO-202ENST00000348962 KRTAP1-3Q8IUG1 177 aa10.25□□□□□ -0.77
PTPRO-202ENST00000348962 LINC00612Q8N6U2 182 aa10.25□□□□□ -0.77
PTPRO-202ENST00000348962 C9orf163Q8N9P6 203 aa10.25□□□□□ -0.77
PTPRO-202ENST00000348962 SSBP3-AS1Q7Z2R9 100 aa10.25□□□□□ -0.77
PTPRO-202ENST00000348962 PMAIP1Q13794 54 aa10.24□□□□□ -0.77
PTPRO-202ENST00000348962 ZNF861PO60384 105 aa10.24□□□□□ -0.77
PTPRO-202ENST00000348962 A0A1B0GU69 56 aa10.23□□□□□ -0.77
PTPRO-202ENST00000348962 CEP350Q5VT06 3117 aa10.23□□□□□ -0.77
PTPRO-202ENST00000348962 UTRNP46939 3433 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms