RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PLXNB1O43157 2135 aa15.82■□□□□ 0.12
NPAS3-201ENST00000346562 BCE1O60756 84 aa15.82■□□□□ 0.12
NPAS3-201ENST00000346562 CHTF8P0CG12 524 aa15.8■□□□□ 0.12
NPAS3-201ENST00000346562 ATP11AUNQ6ZP68 121 aa15.78■□□□□ 0.12
NPAS3-201ENST00000346562 LINC00588Q9Y4M8 146 aa15.78■□□□□ 0.12
NPAS3-201ENST00000346562 WWC2-AS2Q96NR7 200 aa15.78■□□□□ 0.12
NPAS3-201ENST00000346562 GVQW2A0A096LPI5 108 aaPredicted RBP15.76■□□□□ 0.11
NPAS3-201ENST00000346562 SPAG11AQ6PDA7 123 aa15.76■□□□□ 0.11
NPAS3-201ENST00000346562 LOC110117498A0A087WWA1 95 aa15.76■□□□□ 0.11
NPAS3-201ENST00000346562 J3QL48 77 aa15.75■□□□□ 0.11
NPAS3-201ENST00000346562 Q6ZQT0 140 aa15.74■□□□□ 0.11
NPAS3-201ENST00000346562 Q96NJ1 140 aa15.74■□□□□ 0.11
NPAS3-201ENST00000346562 Q8NAQ8 132 aa15.73■□□□□ 0.11
NPAS3-201ENST00000346562 RPL37AP61513 92 aaKnown RBP15.72■□□□□ 0.11
NPAS3-201ENST00000346562 AGRNO00468 2067 aa15.71■□□□□ 0.11
NPAS3-201ENST00000346562 CDIP1Q9H305 208 aa15.71■□□□□ 0.11
NPAS3-201ENST00000346562 TRAV22A0A0B4J277 110 aa15.71■□□□□ 0.11
NPAS3-201ENST00000346562 FAM218AQ96MZ4 157 aa15.7■□□□□ 0.1
NPAS3-201ENST00000346562 C8orf87E5RJ46 101 aa15.69■□□□□ 0.1
NPAS3-201ENST00000346562 TET2Q6N021 2002 aaPredicted RBP15.69■□□□□ 0.1
NPAS3-201ENST00000346562 ST20-AS1Q8NBB2 130 aa15.69■□□□□ 0.1
NPAS3-201ENST00000346562 COL4A2P08572 1712 aa15.67■□□□□ 0.1
NPAS3-201ENST00000346562 CACNA1AO00555 2505 aa15.66■□□□□ 0.1
NPAS3-201ENST00000346562 LOC101927531A0A1B0GV80 90 aa15.64■□□□□ 0.09
NPAS3-201ENST00000346562 DNAH10OSP0CZ25 163 aa15.63■□□□□ 0.09
NPAS3-201ENST00000346562 TRBV7-4A0A0J9YYF1 115 aa15.6■□□□□ 0.09
NPAS3-201ENST00000346562 A8MWP4 228 aa15.57■□□□□ 0.08
NPAS3-201ENST00000346562 PRO0628Q9UI54 55 aa15.57■□□□□ 0.08
NPAS3-201ENST00000346562 COX6B2Q6YFQ2 88 aa15.55■□□□□ 0.08
NPAS3-201ENST00000346562 CCDC168Q8NDH2 2452 aa15.54■□□□□ 0.08
NPAS3-201ENST00000346562 SMCPP49901 116 aaPredicted RBP15.54■□□□□ 0.08
NPAS3-201ENST00000346562 MRPL34Q9BQ48 92 aaKnown RBP15.53■□□□□ 0.08
NPAS3-201ENST00000346562 VPREB1P12018 145 aa15.51■□□□□ 0.07
NPAS3-201ENST00000346562 IGLV8-61A0A075B6I0 122 aa15.51■□□□□ 0.07
NPAS3-201ENST00000346562 IGLV6-57P01721 117 aa15.51■□□□□ 0.07
NPAS3-201ENST00000346562 FAM168BA1KXE4 195 aa15.5■□□□□ 0.07
NPAS3-201ENST00000346562 IGLV1-50A0A075B6I6 118 aa15.48■□□□□ 0.07
NPAS3-201ENST00000346562 TM2D3Q9BRN9 247 aa15.47■□□□□ 0.07
NPAS3-201ENST00000346562 PTPRBP23467 1997 aa15.46■□□□□ 0.07
NPAS3-201ENST00000346562 ABCA2Q9BZC7 2435 aa15.45■□□□□ 0.06
NPAS3-201ENST00000346562 SERTAD4-AS1Q5TG53 156 aa15.45■□□□□ 0.06
NPAS3-201ENST00000346562 SPINT4Q6UDR6 99 aa15.45■□□□□ 0.06
NPAS3-201ENST00000346562 PRO0461Q9UI25 63 aa15.44■□□□□ 0.06
NPAS3-201ENST00000346562 KLK9Q2XQG4 91 aa15.44■□□□□ 0.06
NPAS3-201ENST00000346562 LINC00304Q8N9R0 145 aa15.43■□□□□ 0.06
NPAS3-201ENST00000346562 NCOR2Q9Y618 2525 aa15.43■□□□□ 0.06
NPAS3-201ENST00000346562 COL27A1Q8IZC6 1860 aaPredicted RBP15.43■□□□□ 0.06
NPAS3-201ENST00000346562 RPS28P62857 69 aaKnown RBP15.41■□□□□ 0.06
NPAS3-201ENST00000346562 KCNQ1DNQ9H478 68 aa15.41■□□□□ 0.06
NPAS3-201ENST00000346562 IGF2RP11717 2491 aa15.4■□□□□ 0.06
NPAS3-201ENST00000346562 K7EQZ3 153 aa15.4■□□□□ 0.06
NPAS3-201ENST00000346562 LINC01600Q96MT4 127 aa15.37■□□□□ 0.05
NPAS3-201ENST00000346562 DSCR10P59022 87 aa15.37■□□□□ 0.05
NPAS3-201ENST00000346562 LITAFQ99732 161 aa15.36■□□□□ 0.05
NPAS3-201ENST00000346562 K7EIL1 84 aa15.35■□□□□ 0.05
NPAS3-201ENST00000346562 KRTAP10-11P60412 298 aa15.35■□□□□ 0.05
NPAS3-201ENST00000346562 C4orf26Q17RF5 130 aa15.34■□□□□ 0.05
NPAS3-201ENST00000346562 COA5Q86WW8 74 aa15.34■□□□□ 0.05
NPAS3-201ENST00000346562 C2CD3Q4AC94 2353 aa15.34■□□□□ 0.05
NPAS3-201ENST00000346562 SSBP3-AS1Q7Z2R9 100 aa15.34■□□□□ 0.05
NPAS3-201ENST00000346562 ERC2-IT1O76042 136 aa15.34■□□□□ 0.05
NPAS3-201ENST00000346562 CSNK1G2-AS1Q8NCQ2 148 aa15.34■□□□□ 0.05
NPAS3-201ENST00000346562 ZNF861PO60384 105 aa15.32■□□□□ 0.04
NPAS3-201ENST00000346562 MYO18BQ8IUG5 2567 aa15.32■□□□□ 0.04
NPAS3-201ENST00000346562 IGFL1Q6UW32 110 aa15.32■□□□□ 0.04
NPAS3-201ENST00000346562 C8orf17Q9NRJ1 99 aa15.31■□□□□ 0.04
NPAS3-201ENST00000346562 C19orf73Q9NVV2 129 aa15.3■□□□□ 0.04
NPAS3-201ENST00000346562 APLNQ9ULZ1 77 aa15.29■□□□□ 0.04
NPAS3-201ENST00000346562 LINC00528Q8N1L1 170 aa15.28■□□□□ 0.04
NPAS3-201ENST00000346562 C9orf92A6NGG3 77 aa15.28■□□□□ 0.04
NPAS3-201ENST00000346562 UQCR11O14957 56 aa15.28■□□□□ 0.04
NPAS3-201ENST00000346562 OBSCN-AS1Q96MR7 158 aa15.28■□□□□ 0.04
NPAS3-201ENST00000346562 A0A1B0GVX0 72 aa15.26■□□□□ 0.03
NPAS3-201ENST00000346562 A0A087WTM6 91 aa15.25■□□□□ 0.03
NPAS3-201ENST00000346562 C15orf56Q8N910 161 aa15.25■□□□□ 0.03
NPAS3-201ENST00000346562 PIEZO2Q9H5I5 2752 aa15.24■□□□□ 0.03
NPAS3-201ENST00000346562 CYP4F30PQ9H0H9 118 aa15.24■□□□□ 0.03
NPAS3-201ENST00000346562 PRR15Q8IV56 129 aa15.24■□□□□ 0.03
NPAS3-201ENST00000346562 PRR34Q9NV39 138 aa15.23■□□□□ 0.03
NPAS3-201ENST00000346562 CRIPTQ9P021 101 aa15.23■□□□□ 0.03
NPAS3-201ENST00000346562 LINC00336Q6ZUF6 198 aa15.22■□□□□ 0.03
NPAS3-201ENST00000346562 RBM12B-AS1Q9P1G2 102 aa15.2■□□□□ 0.02
NPAS3-201ENST00000346562 PIEZO1Q92508 2521 aa15.2■□□□□ 0.02
NPAS3-201ENST00000346562 PLA2G2DQ9UNK4 145 aa15.2■□□□□ 0.02
NPAS3-201ENST00000346562 TLX1NBP0CAT3 122 aa15.18■□□□□ 0.02
NPAS3-201ENST00000346562 C9orf129Q5T035 196 aaKnown RBP15.18■□□□□ 0.02
NPAS3-201ENST00000346562 IGLV5-37A0A075B6J1 123 aa15.17■□□□□ 0.02
NPAS3-201ENST00000346562 IGLV7-43P04211 117 aa15.15■□□□□ 0.02
NPAS3-201ENST00000346562 SMR3BP02814 79 aaPredicted RBP15.14■□□□□ 0.01
NPAS3-201ENST00000346562 MIR22HGQ0VDD5 57 aa15.14■□□□□ 0.01
NPAS3-201ENST00000346562 C9orf163Q8N9P6 203 aa15.13■□□□□ 0.01
NPAS3-201ENST00000346562 LRRK2Q5S007 2527 aa15.12■□□□□ 0.01
NPAS3-201ENST00000346562 DOPEY1Q5JWR5 2465 aa15.12■□□□□ 0.01
NPAS3-201ENST00000346562 A8MUN3 132 aa15.11■□□□□ 0.01
NPAS3-201ENST00000346562 Q8N377 158 aa15.1■□□□□ 0.01
NPAS3-201ENST00000346562 KRTAP10-3P60369 221 aa15.08■□□□□ 0
NPAS3-201ENST00000346562 LINC00612Q8N6U2 182 aa15.08■□□□□ 0
NPAS3-201ENST00000346562 MUC4Q99102 2169 aa15.06■□□□□ 0
NPAS3-201ENST00000346562 MYO9AB2RTY4 2548 aa15.03■□□□□ -0
NPAS3-201ENST00000346562 PSORS1C2Q9UIG4 136 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms