RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ODF1Q14990 250 aa9.95□□□□□ -0.82
ATG4B-201ENST00000344376 REG3GQ6UW15 175 aa9.95□□□□□ -0.82
ATG4B-201ENST00000344376 FAM168BA1KXE4 195 aa9.94□□□□□ -0.82
ATG4B-201ENST00000344376 F8VRH5 84 aa9.94□□□□□ -0.82
ATG4B-201ENST00000344376 PSORS1C2Q9UIG4 136 aa9.94□□□□□ -0.82
ATG4B-201ENST00000344376 IGLV5-45A0A087WSX0 123 aa9.93□□□□□ -0.82
ATG4B-201ENST00000344376 SMIM1B2RUZ4 78 aa9.93□□□□□ -0.82
ATG4B-201ENST00000344376 H3BRM9 83 aa9.92□□□□□ -0.82
ATG4B-201ENST00000344376 HINT1P49773 126 aaPredicted RBP9.92□□□□□ -0.82
ATG4B-201ENST00000344376 C1orf137Q5JT78 98 aa9.92□□□□□ -0.82
ATG4B-201ENST00000344376 SLC25A34Q6PIV7 304 aa9.92□□□□□ -0.82
ATG4B-201ENST00000344376 M0QXV9 152 aa9.92□□□□□ -0.82
ATG4B-201ENST00000344376 DPM2O94777 84 aa9.92□□□□□ -0.82
ATG4B-201ENST00000344376 MT1HL1P0DM35 61 aa9.92□□□□□ -0.82
ATG4B-201ENST00000344376 COX7B2Q8TF08 81 aa9.92□□□□□ -0.82
ATG4B-201ENST00000344376 IGKCP01834 107 aa9.91□□□□□ -0.82
ATG4B-201ENST00000344376 COX8AP10176 69 aa9.91□□□□□ -0.82
ATG4B-201ENST00000344376 PLNP26678 52 aa9.91□□□□□ -0.82
ATG4B-201ENST00000344376 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.822e-8■■■□□ 15
ATG4B-201ENST00000344376 UBE2BP63146 152 aa9.9□□□□□ -0.82
ATG4B-201ENST00000344376 UBE2V1Q13404 147 aa9.9□□□□□ -0.82
ATG4B-201ENST00000344376 C9orf129Q5T035 196 aaKnown RBP9.9□□□□□ -0.82
ATG4B-201ENST00000344376 LINC01600Q96MT4 127 aa9.9□□□□□ -0.82
ATG4B-201ENST00000344376 SPINK8P0C7L1 97 aa9.89□□□□□ -0.83
ATG4B-201ENST00000344376 BVES-AS1Q5T3Y7 98 aa9.88□□□□□ -0.83
ATG4B-201ENST00000344376 CBY1Q9Y3M2 126 aa9.88□□□□□ -0.83
ATG4B-201ENST00000344376 ANKRD39Q53RE8 183 aa9.87□□□□□ -0.83
ATG4B-201ENST00000344376 XAGE1AQ9HD64 81 aa9.87□□□□□ -0.83
ATG4B-201ENST00000344376 PLA2G2DQ9UNK4 145 aa9.87□□□□□ -0.83
ATG4B-201ENST00000344376 KRTAP7-1Q8IUC3 87 aa9.86□□□□□ -0.83
ATG4B-201ENST00000344376 BOD1L2Q8IYS8 172 aa9.86□□□□□ -0.83
ATG4B-201ENST00000344376 TAX1BP3O14907 124 aa9.85□□□□□ -0.83
ATG4B-201ENST00000344376 IGLV7-43P04211 117 aa9.85□□□□□ -0.83
ATG4B-201ENST00000344376 CHTOPQ9Y3Y2 248 aaKnown RBP9.85□□□□□ -0.83
ATG4B-201ENST00000344376 DIRC1Q969H9 104 aa9.84□□□□□ -0.83
ATG4B-201ENST00000344376 ZNF22P17026 224 aaPredicted RBP9.84□□□□□ -0.83
ATG4B-201ENST00000344376 C2orf91Q6ZV80 131 aa9.84□□□□□ -0.83
ATG4B-201ENST00000344376 KRTAP11-1Q8IUC1 163 aa9.83□□□□□ -0.84
ATG4B-201ENST00000344376 C22orf24Q9Y442 160 aa9.83□□□□□ -0.84
ATG4B-201ENST00000344376 IGLV5-39A0A0G2JS06 123 aa9.82□□□□□ -0.84
ATG4B-201ENST00000344376 Q6ZVH6 145 aa9.82□□□□□ -0.84
ATG4B-201ENST00000344376 TMEM170BQ5T4T1 132 aa9.81□□□□□ -0.84
ATG4B-201ENST00000344376 TP73-AS1Q9UF72 201 aa9.81□□□□□ -0.84
ATG4B-201ENST00000344376 HMCN2Q8NDA2 5059 aa9.81□□□□□ -0.84
ATG4B-201ENST00000344376 HIGD1BQ9P298 99 aa9.8□□□□□ -0.84
ATG4B-201ENST00000344376 C11orf86A6NJI1 115 aa9.8□□□□□ -0.84
ATG4B-201ENST00000344376 NMUP48645 174 aa9.8□□□□□ -0.84
ATG4B-201ENST00000344376 H0Y9J4 135 aa9.79□□□□□ -0.84
ATG4B-201ENST00000344376 KRTAP10-8P60410 259 aa9.79□□□□□ -0.84
ATG4B-201ENST00000344376 SFTA2Q6UW10 78 aa9.79□□□□□ -0.84
ATG4B-201ENST00000344376 MRPL55Q7Z7F7 128 aaKnown RBP9.79□□□□□ -0.84
ATG4B-201ENST00000344376 TNXBP22105 4242 aa9.78□□□□□ -0.84
ATG4B-201ENST00000344376 VAMP3Q15836 100 aa9.78□□□□□ -0.84
ATG4B-201ENST00000344376 E9PLD3 99 aa9.77□□□□□ -0.85
ATG4B-201ENST00000344376 PFN2P35080 140 aa9.77□□□□□ -0.85
ATG4B-201ENST00000344376 HSD52Q0P140 79 aa9.77□□□□□ -0.85
ATG4B-201ENST00000344376 IGKV2D-26A0A0A0MRZ7 120 aa9.76□□□□□ -0.85
ATG4B-201ENST00000344376 HERVK_113P61574 105 aa9.76□□□□□ -0.85
ATG4B-201ENST00000344376 PCP2Q8IVA1 136 aa9.76□□□□□ -0.85
ATG4B-201ENST00000344376 NKAPP1Q8N9T2 125 aa9.76□□□□□ -0.85
ATG4B-201ENST00000344376 ERG28Q9UKR5 140 aa9.76□□□□□ -0.85
ATG4B-201ENST00000344376 COX17Q14061 63 aa9.75□□□□□ -0.85
ATG4B-201ENST00000344376 IGLV5-37A0A075B6J1 123 aa9.73□□□□□ -0.85
ATG4B-201ENST00000344376 A6NDN8 102 aa9.73□□□□□ -0.85
ATG4B-201ENST00000344376 ZNF861PO60384 105 aa9.73□□□□□ -0.85
ATG4B-201ENST00000344376 TAL2Q16559 108 aa9.73□□□□□ -0.85
ATG4B-201ENST00000344376 LINC00167Q96N53 147 aa9.73□□□□□ -0.85
ATG4B-201ENST00000344376 ZNF625Q96I27 306 aaPredicted RBP9.72□□□□□ -0.85
ATG4B-201ENST00000344376 TMEM223A0PJW6 202 aa9.71□□□□□ -0.85
ATG4B-201ENST00000344376 GAGE10A6NGK3 116 aa9.71□□□□□ -0.85
ATG4B-201ENST00000344376 C9orf118A6NHY6 69 aa9.71□□□□□ -0.85
ATG4B-201ENST00000344376 RPL37AP8A6NKH3 93 aa9.71□□□□□ -0.85
ATG4B-201ENST00000344376 BCE1O60756 84 aa9.71□□□□□ -0.85
ATG4B-201ENST00000344376 MYMXA0A1B0GTQ4 84 aa9.71□□□□□ -0.86
ATG4B-201ENST00000344376 RPL28P46779 137 aaKnown RBP9.71□□□□□ -0.86
ATG4B-201ENST00000344376 SND1-IT1Q9HBX3 110 aa9.71□□□□□ -0.86
ATG4B-201ENST00000344376 IGLV1-50A0A075B6I6 118 aa9.7□□□□□ -0.86
ATG4B-201ENST00000344376 RPL24P83731 157 aaKnown RBP9.7□□□□□ -0.86
ATG4B-201ENST00000344376 PRR26Q8N8Z3 221 aa9.7□□□□□ -0.86
ATG4B-201ENST00000344376 LINC00158P58513 81 aa9.67□□□□□ -0.86
ATG4B-201ENST00000344376 OCIAD2Q56VL3 154 aa9.67□□□□□ -0.86
ATG4B-201ENST00000344376 GTF2H5Q6ZYL4 71 aa9.67□□□□□ -0.86
ATG4B-201ENST00000344376 K7EP34 96 aa9.67□□□□□ -0.86
ATG4B-201ENST00000344376 KRTAP1-4P0C5Y4 121 aa9.67□□□□□ -0.86
ATG4B-201ENST00000344376 RPL13AP40429 203 aaKnown RBP9.67□□□□□ -0.86
ATG4B-201ENST00000344376 PCP4P48539 62 aa9.67□□□□□ -0.86
ATG4B-201ENST00000344376 PLEKHB2Q96CS7 222 aa9.67□□□□□ -0.86
ATG4B-201ENST00000344376 TTTY13Q9BZ97 58 aa9.67□□□□□ -0.86
ATG4B-201ENST00000344376 IGKV2-28A0A075B6P5 120 aa9.66□□□□□ -0.86
ATG4B-201ENST00000344376 LEPROTO15243 131 aa9.66□□□□□ -0.86
ATG4B-201ENST00000344376 IGKV2D-28P01615 120 aa9.66□□□□□ -0.86
ATG4B-201ENST00000344376 VPREB1P12018 145 aa9.66□□□□□ -0.86
ATG4B-201ENST00000344376 ZNF815PA8K554 130 aa9.65□□□□□ -0.86
ATG4B-201ENST00000344376 UBE2AP49459 152 aa9.65□□□□□ -0.86
ATG4B-201ENST00000344376 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.86
ATG4B-201ENST00000344376 HERV-K104P63124 156 aa9.64□□□□□ -0.87
ATG4B-201ENST00000344376 CEND1Q8N111 149 aa9.64□□□□□ -0.87
ATG4B-201ENST00000344376 A0A0U1RRA0 63 aa9.63□□□□□ -0.87
ATG4B-201ENST00000344376 J3QQQ9 107 aa9.63□□□□□ -0.87
ATG4B-201ENST00000344376 K7ERU9 68 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms