RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 LYRM7Q5U5X0 104 aa8.94□□□□□ -0.98
HERPUD1-202ENST00000344114 GTF2H5Q6ZYL4 71 aa8.94□□□□□ -0.98
HERPUD1-202ENST00000344114 MIR7-3HGQ8N6C7 128 aa8.94□□□□□ -0.98
HERPUD1-202ENST00000344114 DMBT1Q9UGM3 2413 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-202ENST00000344114 K7EP34 96 aa8.93□□□□□ -0.98
HERPUD1-202ENST00000344114 EIF4EBP3O60516 100 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-202ENST00000344114 C2orf82Q6UX34 121 aa8.93□□□□□ -0.98
HERPUD1-202ENST00000344114 SOSTDC1Q6X4U4 206 aa8.93□□□□□ -0.98
HERPUD1-202ENST00000344114 KRTAP1-5Q9BYS1 174 aa8.93□□□□□ -0.98
HERPUD1-202ENST00000344114 IGKV2D-24A0A075B6R9 120 aa8.92□□□□□ -0.98
HERPUD1-202ENST00000344114 GAGE10A6NGK3 116 aa8.92□□□□□ -0.98
HERPUD1-202ENST00000344114 INAFM2P0DMQ5 153 aa8.92□□□□□ -0.98
HERPUD1-202ENST00000344114 RMI2Q96E14 147 aa8.92□□□□□ -0.98
HERPUD1-202ENST00000344114 SPCS1Q9Y6A9 102 aa8.92□□□□□ -0.98
HERPUD1-202ENST00000344114 PFN2P35080 140 aa8.91□□□□□ -0.98
HERPUD1-202ENST00000344114 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
HERPUD1-202ENST00000344114 TTC32Q5I0X7 151 aa8.91□□□□□ -0.98
HERPUD1-202ENST00000344114 GVQW2A0A096LPI5 108 aaPredicted RBP8.9□□□□□ -0.98
HERPUD1-202ENST00000344114 F8WDY8 70 aa8.9□□□□□ -0.98
HERPUD1-202ENST00000344114 ZNF561-AS1K7EIQ3 104 aa8.89□□□□□ -0.99
HERPUD1-202ENST00000344114 C15orf56Q8N910 161 aa8.89□□□□□ -0.99
HERPUD1-202ENST00000344114 NTN5Q8WTR8 489 aaPredicted RBP8.89□□□□□ -0.99
HERPUD1-202ENST00000344114 Q9HAA7 133 aa8.89□□□□□ -0.99
HERPUD1-202ENST00000344114 VPS13BQ7Z7G8 4022 aa8.89□□□□□ -0.99
HERPUD1-202ENST00000344114 LOC107984156A0A0G2JMH3 177 aa8.88□□□□□ -0.99
HERPUD1-202ENST00000344114 Q1RN00 199 aa8.88□□□□□ -0.99
HERPUD1-202ENST00000344114 ARL17AQ8IVW1 177 aa8.88□□□□□ -0.99
HERPUD1-202ENST00000344114 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
HERPUD1-202ENST00000344114 TRBV30A0A0K0K1B3 111 aa8.87□□□□□ -0.99
HERPUD1-202ENST00000344114 RPL13AP40429 203 aaKnown RBP8.87□□□□□ -0.99
HERPUD1-202ENST00000344114 UNQ6190/PRO20217Q6UXQ8 127 aa8.87□□□□□ -0.99
HERPUD1-202ENST00000344114 SND1-IT1Q9HBX3 110 aa8.87□□□□□ -0.99
HERPUD1-202ENST00000344114 XGP55808 180 aa8.86□□□□□ -0.99
HERPUD1-202ENST00000344114 MYCBP2O75592 4640 aa8.86□□□□□ -0.99
HERPUD1-202ENST00000344114 TRAV13-2A0A0B4J235 113 aa8.86□□□□□ -0.99
HERPUD1-202ENST00000344114 PSMB2P49721 201 aa8.86□□□□□ -0.99
HERPUD1-202ENST00000344114 HIGD2BQ4VC39 106 aa8.86□□□□□ -0.99
HERPUD1-202ENST00000344114 C10orf25Q5T742 122 aa8.86□□□□□ -0.99
HERPUD1-202ENST00000344114 Q5VSD8 79 aa8.86□□□□□ -0.99
HERPUD1-202ENST00000344114 CAMK2N2Q96S95 79 aa8.86□□□□□ -0.99
HERPUD1-202ENST00000344114 H7C2G1 150 aa8.85□□□□□ -0.99
HERPUD1-202ENST00000344114 Q6ZRN7 208 aaPredicted RBP8.85□□□□□ -0.99
HERPUD1-202ENST00000344114 LINC00526Q96FQ7 95 aa8.85□□□□□ -0.99
HERPUD1-202ENST00000344114 TRBV20-1A0A075B6N2 111 aa8.84□□□□□ -0.99
HERPUD1-202ENST00000344114 NDUFC2O95298 119 aa8.84□□□□□ -0.99
HERPUD1-202ENST00000344114 C9orf116Q5BN46 136 aaPredicted RBP8.84□□□□□ -0.99
HERPUD1-202ENST00000344114 C6orf48Q9UBA6 75 aa8.84□□□□□ -0.99
HERPUD1-202ENST00000344114 FAT1Q14517 4588 aa8.83□□□□□ -1
HERPUD1-202ENST00000344114 IGKV2-28A0A075B6P5 120 aa8.82□□□□□ -1
HERPUD1-202ENST00000344114 TRIAP1O43715 76 aa8.82□□□□□ -1
HERPUD1-202ENST00000344114 IGKV2D-28P01615 120 aa8.82□□□□□ -1
HERPUD1-202ENST00000344114 COX6CP09669 75 aa8.82□□□□□ -1
HERPUD1-202ENST00000344114 SCGB1C2P0DMR2 95 aa8.82□□□□□ -1
HERPUD1-202ENST00000344114 Q6ZRU5 148 aa8.81□□□□□ -1
HERPUD1-202ENST00000344114 LINC00337Q8N6G1 96 aa8.81□□□□□ -1
HERPUD1-202ENST00000344114 USP17L23D6RBM5 183 aa8.8□□□□□ -1
HERPUD1-202ENST00000344114 SYCNQ0VAF6 134 aa8.8□□□□□ -1
HERPUD1-202ENST00000344114 TCL1BO95988 128 aa8.79□□□□□ -1
HERPUD1-202ENST00000344114 FUSP35637 526 aaKnown RBP eCLIP8.79□□□□□ -1
HERPUD1-202ENST00000344114 RNF151Q2KHN1 245 aa8.79□□□□□ -1
HERPUD1-202ENST00000344114 FLG2Q5D862 2391 aaPredicted RBP8.79□□□□□ -1
HERPUD1-202ENST00000344114 H3BMG7 143 aa8.78□□□□□ -1
HERPUD1-202ENST00000344114 CARD19Q96LW7 228 aa8.78□□□□□ -1
HERPUD1-202ENST00000344114 NDUFC2-KCTD14E9PQ53 114 aa8.77□□□□□ -1.01
HERPUD1-202ENST00000344114 F8W1H4 67 aa8.77□□□□□ -1.01
HERPUD1-202ENST00000344114 KRTAP10-1P60331 282 aa8.77□□□□□ -1.01
HERPUD1-202ENST00000344114 ATXN8Q156A1 80 aa8.77□□□□□ -1.01
HERPUD1-202ENST00000344114 RPL28P46779 137 aaKnown RBP8.76□□□□□ -1.01
HERPUD1-202ENST00000344114 SRRM2Q9UQ35 2752 aaKnown RBP8.75□□□□□ -1.01
HERPUD1-202ENST00000344114 TRBV10-2A0A0K0K1G8 114 aa8.74□□□□□ -1.01
HERPUD1-202ENST00000344114 PSCAO43653 123 aa8.74□□□□□ -1.01
HERPUD1-202ENST00000344114 SMR3BP02814 79 aaPredicted RBP8.74□□□□□ -1.01
HERPUD1-202ENST00000344114 TLX1NBP0CAT3 122 aa8.74□□□□□ -1.01
HERPUD1-202ENST00000344114 OR13C6PQ8NH95 151 aa8.74□□□□□ -1.01
HERPUD1-202ENST00000344114 A0A087WTM6 91 aa8.73□□□□□ -1.01
HERPUD1-202ENST00000344114 LST1O00453 97 aa8.73□□□□□ -1.01
HERPUD1-202ENST00000344114 C14orf177Q52M58 125 aa8.73□□□□□ -1.01
HERPUD1-202ENST00000344114 TMEM126AQ9H061 195 aa8.73□□□□□ -1.01
HERPUD1-202ENST00000344114 PRO0461Q9UI25 63 aa8.73□□□□□ -1.01
HERPUD1-202ENST00000344114 SMIM11BQ8TCY0 68 aa8.73□□□□□ -1.01
HERPUD1-202ENST00000344114 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
HERPUD1-202ENST00000344114 NCR3O14931 201 aa8.72□□□□□ -1.01
HERPUD1-202ENST00000344114 LINC01620Q4KN68 170 aa8.72□□□□□ -1.01
HERPUD1-202ENST00000344114 CLEC2BQ92478 149 aa8.72□□□□□ -1.01
HERPUD1-202ENST00000344114 S100A7L2Q5SY68 101 aa8.71□□□□□ -1.02
HERPUD1-202ENST00000344114 Q8NDZ9 215 aa8.71□□□□□ -1.02
HERPUD1-202ENST00000344114 XAGE1AQ9HD64 81 aa8.71□□□□□ -1.02
HERPUD1-202ENST00000344114 H0YGX0 51 aa8.7□□□□□ -1.02
HERPUD1-202ENST00000344114 J3QL48 77 aa8.7□□□□□ -1.02
HERPUD1-202ENST00000344114 M0QXV9 152 aa8.7□□□□□ -1.02
HERPUD1-202ENST00000344114 LECT2O14960 151 aa8.7□□□□□ -1.02
HERPUD1-202ENST00000344114 SLPIP03973 132 aa8.7□□□□□ -1.02
HERPUD1-202ENST00000344114 Q6ZRP5 223 aa8.7□□□□□ -1.02
HERPUD1-202ENST00000344114 C9JAW5 83 aa8.69□□□□□ -1.02
HERPUD1-202ENST00000344114 VPREB1P12018 145 aa8.69□□□□□ -1.02
HERPUD1-202ENST00000344114 PRR3P79522 188 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-202ENST00000344114 LOC107984640A0A0U1RRK4 108 aa8.68□□□□□ -1.02
HERPUD1-202ENST00000344114 SLC25A20O43772 301 aa8.68□□□□□ -1.02
HERPUD1-202ENST00000344114 TRACP01848 142 aa8.68□□□□□ -1.02
HERPUD1-202ENST00000344114 CNBPP62633 177 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms