RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 CENPEQ02224 2701 aa13.86□□□□□ -0.19
SOX12-201ENST00000342665 ESRGQ1W209 222 aa13.85□□□□□ -0.19
SOX12-201ENST00000342665 HRCT1Q6UXD1 115 aa13.85□□□□□ -0.19
SOX12-201ENST00000342665 H3BNG1 76 aa13.84□□□□□ -0.19
SOX12-201ENST00000342665 PRR4Q16378 134 aa13.84□□□□□ -0.19
SOX12-201ENST00000342665 C6orf48Q9UBA6 75 aa13.83□□□□□ -0.19
SOX12-201ENST00000342665 LY6G6CO95867 125 aa13.83□□□□□ -0.2
SOX12-201ENST00000342665 LINC01547P58512 204 aaPredicted RBP13.83□□□□□ -0.2
SOX12-201ENST00000342665 V9GYY9 64 aa13.82□□□□□ -0.2
SOX12-201ENST00000342665 A0A096LNT2 108 aa13.81□□□□□ -0.2
SOX12-201ENST00000342665 SMIM26A0A096LP01 95 aa13.8□□□□□ -0.2
SOX12-201ENST00000342665 CASC2Q6XLA1 102 aa13.79□□□□□ -0.2
SOX12-201ENST00000342665 C22orf24Q9Y442 160 aa13.79□□□□□ -0.2
SOX12-201ENST00000342665 A0A087WSZ3 146 aa13.78□□□□□ -0.2
SOX12-201ENST00000342665 Q8NAQ8 132 aa13.78□□□□□ -0.2
SOX12-201ENST00000342665 Q9BRP9 147 aa13.78□□□□□ -0.2
SOX12-201ENST00000342665 CXCL6P80162 114 aa13.77□□□□□ -0.2
SOX12-201ENST00000342665 MGAM2Q2M2H8 2515 aa13.77□□□□□ -0.2
SOX12-201ENST00000342665 SEC61GP60059 68 aa13.76□□□□□ -0.21
SOX12-201ENST00000342665 SERP1Q9Y6X1 66 aa13.76□□□□□ -0.21
SOX12-201ENST00000342665 Q8N9L7 120 aa13.76□□□□□ -0.21
SOX12-201ENST00000342665 SPATA3Q8NHX4 192 aa13.76□□□□□ -0.21
SOX12-201ENST00000342665 LINC00208Q96KT6 92 aa13.76□□□□□ -0.21
SOX12-201ENST00000342665 FLNAP21333 2647 aaKnown RBP13.75□□□□□ -0.21
SOX12-201ENST00000342665 CSNK1G2-AS1Q8NCQ2 148 aa13.73□□□□□ -0.21
SOX12-201ENST00000342665 TRBV7-6A0A0J9YX20 115 aa13.73□□□□□ -0.21
SOX12-201ENST00000342665 TRIOO75962 3097 aa13.72□□□□□ -0.21
SOX12-201ENST00000342665 SPTSSBQ8NFR3 76 aa13.72□□□□□ -0.21
SOX12-201ENST00000342665 PRLHP81277 87 aa13.72□□□□□ -0.21
SOX12-201ENST00000342665 KIAA0087Q14695 138 aa13.71□□□□□ -0.21
SOX12-201ENST00000342665 TMEM254Q8TBM7 123 aa13.71□□□□□ -0.21
SOX12-201ENST00000342665 XIRP2A4UGR9 3374 aa13.71□□□□□ -0.21
SOX12-201ENST00000342665 LINC00167Q96N53 147 aa13.7□□□□□ -0.22
SOX12-201ENST00000342665 ELOF1P60002 83 aaKnown RBP13.69□□□□□ -0.22
SOX12-201ENST00000342665 SMCR5Q8TEV8 140 aa13.69□□□□□ -0.22
SOX12-201ENST00000342665 ITPR3Q14573 2671 aa13.68□□□□□ -0.22
SOX12-201ENST00000342665 ZNF292O60281 2723 aa13.67□□□□□ -0.22
SOX12-201ENST00000342665 EIF4EBP3O60516 100 aaPredicted RBP13.66□□□□□ -0.22
SOX12-201ENST00000342665 WDFY4Q6ZS81 3184 aa13.66□□□□□ -0.22
SOX12-201ENST00000342665 IGLV5-52A0A0A0MRZ9 124 aa13.66□□□□□ -0.22
SOX12-201ENST00000342665 MGAQ8IWI9 3026 aa13.66□□□□□ -0.22
SOX12-201ENST00000342665 GVQW2A0A096LPI5 108 aaPredicted RBP13.66□□□□□ -0.22
SOX12-201ENST00000342665 KRTAP24-1Q3LI83 254 aa13.66□□□□□ -0.22
SOX12-201ENST00000342665 ATRQ13535 2644 aa13.64□□□□□ -0.23
SOX12-201ENST00000342665 DEFB116Q30KQ4 102 aa13.64□□□□□ -0.23
SOX12-201ENST00000342665 NHLRC4P0CG21 123 aaPredicted RBP13.64□□□□□ -0.23
SOX12-201ENST00000342665 Q6ZQT0 140 aa13.64□□□□□ -0.23
SOX12-201ENST00000342665 A0A0U1RQV1 116 aa13.63□□□□□ -0.23
SOX12-201ENST00000342665 BCE1O60756 84 aa13.63□□□□□ -0.23
SOX12-201ENST00000342665 GIG44P09565 113 aaPredicted RBP13.63□□□□□ -0.23
SOX12-201ENST00000342665 CRYGAP11844 174 aa13.63□□□□□ -0.23
SOX12-201ENST00000342665 C19orf73Q9NVV2 129 aa13.63□□□□□ -0.23
SOX12-201ENST00000342665 LOC110117498A0A087WWA1 95 aa13.62□□□□□ -0.23
SOX12-201ENST00000342665 A0A1B0GW54 56 aa13.62□□□□□ -0.23
SOX12-201ENST00000342665 HCG22E2RYF7 251 aa13.62□□□□□ -0.23
SOX12-201ENST00000342665 CIRBP-AS1Q8TBR5 109 aa13.62□□□□□ -0.23
SOX12-201ENST00000342665 IGHV6-1A0A0B4J1U7 121 aa13.6□□□□□ -0.23
SOX12-201ENST00000342665 CFAP46Q8IYW2 2715 aa13.6□□□□□ -0.23
SOX12-201ENST00000342665 C1orf134Q5TEV5 83 aa13.59□□□□□ -0.23
SOX12-201ENST00000342665 HELZ2Q9BYK8 2649 aaKnown RBP13.58□□□□□ -0.24
SOX12-201ENST00000342665 ZNF575Q86XF7 245 aa13.58□□□□□ -0.24
SOX12-201ENST00000342665 A6NED7 52 aa13.57□□□□□ -0.24
SOX12-201ENST00000342665 Q6ZRX8 168 aa13.57□□□□□ -0.24
SOX12-201ENST00000342665 IGLV6-57P01721 117 aa13.57□□□□□ -0.24
SOX12-201ENST00000342665 PRR15LQ9BU68 103 aa13.57□□□□□ -0.24
SOX12-201ENST00000342665 MAST4O15021 2626 aa13.57□□□□□ -0.24
SOX12-201ENST00000342665 CDH23Q9H251 3354 aa13.56□□□□□ -0.24
SOX12-201ENST00000342665 VPREB1P12018 145 aa13.55□□□□□ -0.24
SOX12-201ENST00000342665 H0Y9P7 68 aa13.55□□□□□ -0.24
SOX12-201ENST00000342665 LINC00588Q9Y4M8 146 aa13.55□□□□□ -0.24
SOX12-201ENST00000342665 Q8NBF4 154 aa13.54□□□□□ -0.24
SOX12-201ENST00000342665 LINC00612Q8N6U2 182 aa13.54□□□□□ -0.24
SOX12-201ENST00000342665 VPS13AQ96RL7 3174 aa13.53□□□□□ -0.24
SOX12-201ENST00000342665 MDFIQ99750 246 aa13.53□□□□□ -0.24
SOX12-201ENST00000342665 DNAH10OSP0CZ25 163 aa13.52□□□□□ -0.25
SOX12-201ENST00000342665 Q6ZRP5 223 aa13.52□□□□□ -0.25
SOX12-201ENST00000342665 SVIPQ8NHG7 77 aa13.52□□□□□ -0.25
SOX12-201ENST00000342665 PRR34Q9NV39 138 aa13.51□□□□□ -0.25
SOX12-201ENST00000342665 SMIM29Q86T20 159 aa13.51□□□□□ -0.25
SOX12-201ENST00000342665 hDV103S1A0JD37 113 aa13.49□□□□□ -0.25
SOX12-201ENST00000342665 PCOTHQ58A44 107 aa13.48□□□□□ -0.25
SOX12-201ENST00000342665 C16orf90A8MZG2 172 aa13.46□□□□□ -0.25
SOX12-201ENST00000342665 LINC00476Q8WZB0 136 aa13.46□□□□□ -0.26
SOX12-201ENST00000342665 MAP1AP78559 2803 aaPredicted RBP13.45□□□□□ -0.26
SOX12-201ENST00000342665 KRTAP1-3Q8IUG1 177 aa13.45□□□□□ -0.26
SOX12-201ENST00000342665 ST20-AS1Q8NBB2 130 aa13.43□□□□□ -0.26
SOX12-201ENST00000342665 AKAP13Q12802 2813 aa13.43□□□□□ -0.26
SOX12-201ENST00000342665 RPS28P62857 69 aaKnown RBP13.42□□□□□ -0.26
SOX12-201ENST00000342665 KRTAP10-3P60369 221 aa13.42□□□□□ -0.26
SOX12-201ENST00000342665 PHF5AQ7RTV0 110 aaKnown RBP13.41□□□□□ -0.26
SOX12-201ENST00000342665 C1orf64Q8NEQ6 169 aa13.41□□□□□ -0.26
SOX12-201ENST00000342665 LINC00528Q8N1L1 170 aa13.4□□□□□ -0.26
SOX12-201ENST00000342665 NBDYA0A0U1RRE5 68 aa13.4□□□□□ -0.27
SOX12-201ENST00000342665 KCNQ1DNQ9H478 68 aa13.4□□□□□ -0.27
SOX12-201ENST00000342665 K7ERS5 55 aa13.39□□□□□ -0.27
SOX12-201ENST00000342665 EPM2AB3EWF7 344 aa13.38□□□□□ -0.27
SOX12-201ENST00000342665 TM2D3Q9BRN9 247 aa13.36□□□□□ -0.27
SOX12-201ENST00000342665 SERTAD4-AS1Q5TG53 156 aa13.36□□□□□ -0.27
SOX12-201ENST00000342665 MOBPQ13875 183 aa13.36□□□□□ -0.27
SOX12-201ENST00000342665 C1orf195Q5TG92 126 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms