RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 Q75L30 129 aa2.56□□□□□ -2
SYNE1-201ENST00000341594 PCOTHQ58A44 107 aa2.56□□□□□ -2
SYNE1-201ENST00000341594 VMO1Q7Z5L0 202 aa2.56□□□□□ -2
SYNE1-201ENST00000341594 LINC00482Q8N8I6 264 aa2.56□□□□□ -2
SYNE1-201ENST00000341594 FLNBO75369 2602 aaKnown RBP2.56□□□□□ -2
SYNE1-201ENST00000341594 ETDCA0A1B0GVM5 59 aa2.55□□□□□ -2
SYNE1-201ENST00000341594 SMR3AQ99954 134 aa2.55□□□□□ -2
SYNE1-201ENST00000341594 H0Y9J4 135 aa2.55□□□□□ -2
SYNE1-201ENST00000341594 DIRC1Q969H9 104 aa2.55□□□□□ -2
SYNE1-201ENST00000341594 PRAC1Q96KF2 57 aa2.55□□□□□ -2
SYNE1-201ENST00000341594 OCR1Q9BZK8 76 aa2.55□□□□□ -2
SYNE1-201ENST00000341594 IGHV6-1A0A0B4J1U7 121 aa2.55□□□□□ -2
SYNE1-201ENST00000341594 LINC00167Q96N53 147 aa2.55□□□□□ -2
SYNE1-201ENST00000341594 MSMBP08118 114 aa2.55□□□□□ -2
SYNE1-201ENST00000341594 TM2D3Q9BRN9 247 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 COX7BP24311 80 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 A0A0A0MQY5 61 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 HRNRQ86YZ3 2850 aaPredicted RBP2.54□□□□□ -2
SYNE1-201ENST00000341594 UNQ9165/PRO28630Q6UXU0 137 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 KIF25-AS1Q9Y6Z4 181 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 CHD7Q9P2D1 2997 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 FSHBP01225 129 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 B9D2Q9BPU9 175 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 KLK12Q9UKR0 248 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 FRYLO94915 3013 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 LINC01554Q52M75 96 aa2.54□□□□□ -2
SYNE1-201ENST00000341594 A8MUN3 132 aa2.53□□□□□ -2
SYNE1-201ENST00000341594 SPINK6Q6UWN8 80 aa2.53□□□□□ -2
SYNE1-201ENST00000341594 PRR9Q5T870 116 aa2.53□□□□□ -2
SYNE1-201ENST00000341594 LINC00308Q8TCZ7 52 aa2.53□□□□□ -2
SYNE1-201ENST00000341594 A0A1W2PNU3 283 aaPredicted RBP2.53□□□□□ -2
SYNE1-201ENST00000341594 TP53AIP1Q9HCN2 124 aa2.53□□□□□ -2
SYNE1-201ENST00000341594 TSPEAR-AS2P59090 65 aa2.53□□□□□ -2
SYNE1-201ENST00000341594 F8W735 103 aaPredicted RBP2.53□□□□□ -2
SYNE1-201ENST00000341594 H7BZZ5 65 aa2.53□□□□□ -2
SYNE1-201ENST00000341594 INAFM1C9JVW0 142 aa2.53□□□□□ -2.01
SYNE1-201ENST00000341594 TRBV6-4A0A1B0GX49 114 aa2.53□□□□□ -2.01
SYNE1-201ENST00000341594 A0A1B0GU69 56 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 LY6G6DO95868 133 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 KIAA0087Q14695 138 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 CHCHD7Q9BUK0 85 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 A0A087WYN8 130 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 C3orf84H3BNL1 204 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 UQCR11O14957 56 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 IGKV2-24A0A0C4DH68 120 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 H0Y9P7 68 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 KRTAP16-1A8MUX0 517 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 UNQ6190/PRO20217Q6UXQ8 127 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 TRBV6-8A0A0A6YYG3 113 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 SPATA3Q8NHX4 192 aa2.52□□□□□ -2.01
SYNE1-201ENST00000341594 ODF3BA8MYP8 253 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 MAP6D1Q9H9H5 199 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 Q8N814 137 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 C5orf56Q8N8D9 126 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 KALRNO60229 2985 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 TENM1Q9UKZ4 2725 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 ANGP03950 147 aaKnown RBP2.51□□□□□ -2.01
SYNE1-201ENST00000341594 C4orf3Q8WVX3 66 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 M0R378 163 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 MIR7-3HGQ8N6C7 128 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 K7EQD1 137 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 LOC101927531A0A1B0GV80 90 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 TENM3Q9P273 2699 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 CDKN2A-AS1Q9UH64 79 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 TGP01266 2768 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 J3QL48 77 aa2.51□□□□□ -2.01
SYNE1-201ENST00000341594 C9orf129Q5T035 196 aaKnown RBP2.51□□□□□ -2.01
SYNE1-201ENST00000341594 IGKV2D-24A0A075B6R9 120 aa2.5□□□□□ -2.01
SYNE1-201ENST00000341594 ACYP2P14621 99 aa2.5□□□□□ -2.01
SYNE1-201ENST00000341594 IGLV4-69A0A075B6H9 119 aa2.5□□□□□ -2.01
SYNE1-201ENST00000341594 FRYQ5TBA9 3013 aa2.5□□□□□ -2.01
SYNE1-201ENST00000341594 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.5□□□□□ -2.01
SYNE1-201ENST00000341594 LUZP6Q538Z0 58 aa2.5□□□□□ -2.01
SYNE1-201ENST00000341594 SSBP3-AS1Q7Z2R9 100 aa2.5□□□□□ -2.01
SYNE1-201ENST00000341594 DHRS4-AS1Q9P1J3 65 aa2.5□□□□□ -2.01
SYNE1-201ENST00000341594 SMIM11BQ8TCY0 68 aa2.5□□□□□ -2.01
SYNE1-201ENST00000341594 C1orf64Q8NEQ6 169 aa2.5□□□□□ -2.01
SYNE1-201ENST00000341594 LINC00315P59091 139 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 DNAH12Q6ZR08 3092 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 TENM4Q6N022 2769 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 Q8IZM0 81 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 PRR26Q8N8Z3 221 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 NTM-AS1Q6ZSK4 140 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 IGLV4-3A0A075B6K6 122 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 Q8NA96 180 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 SMCR5Q8TEV8 140 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 TSHBP01222 138 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 LINC01547P58512 204 aaPredicted RBP2.49□□□□□ -2.01
SYNE1-201ENST00000341594 EP400Q96L91 3159 aa2.49□□□□□ -2.01
SYNE1-201ENST00000341594 IGLV1-40P01703 118 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 K7EQG2 157 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 IGLV5-37A0A075B6J1 123 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 TRAV22A0A0B4J277 110 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 CYSTM1Q9H1C7 97 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 Q8N2B8 174 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 FHL3Q13643 280 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 C10orf25Q5T742 122 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 TRBV7-4A0A0J9YYF1 115 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 FBN2P35556 2912 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 LY6G6EA0A0G2JKS1 128 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms