RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 Q5XG85 94 aa4.99□□□□□ -1.61
ATXN3-201ENST00000340660 OBSCN-AS1Q96MR7 158 aa4.99□□□□□ -1.61
ATXN3-201ENST00000340660 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
ATXN3-201ENST00000340660 XKRY2A2RUG3 117 aa4.98□□□□□ -1.61
ATXN3-201ENST00000340660 MBP02144 154 aa4.98□□□□□ -1.61
ATXN3-201ENST00000340660 CXCL5P42830 114 aa4.98□□□□□ -1.61
ATXN3-201ENST00000340660 RAB14P61106 215 aa4.98□□□□□ -1.61
ATXN3-201ENST00000340660 SMIM15Q7Z3B0 74 aa4.98□□□□□ -1.61
ATXN3-201ENST00000340660 VCX3BQ9H321 246 aa4.98□□□□□ -1.61
ATXN3-201ENST00000340660 PYGO1Q9Y3Y4 419 aa4.98□□□□□ -1.61
ATXN3-201ENST00000340660 V9GYH0 126 aa4.98□□□□□ -1.61
ATXN3-201ENST00000340660 NAP1L6A6NFF2 107 aa4.97□□□□□ -1.61
ATXN3-201ENST00000340660 A8MWL6 223 aa4.97□□□□□ -1.61
ATXN3-201ENST00000340660 PSMG3Q9BT73 122 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-201ENST00000340660 CTXND1A0A1B0GTU2 59 aa4.96□□□□□ -1.62
ATXN3-201ENST00000340660 VCX3AQ9NNX9 186 aa4.96□□□□□ -1.62
ATXN3-201ENST00000340660 ETDCA0A1B0GVM5 59 aa4.95□□□□□ -1.62
ATXN3-201ENST00000340660 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
ATXN3-201ENST00000340660 TNFSF18Q9UNG2 199 aa4.95□□□□□ -1.62
ATXN3-201ENST00000340660 SMKR1H3BMG3 65 aa4.94□□□□□ -1.62
ATXN3-201ENST00000340660 SERF2P84101 59 aa4.94□□□□□ -1.62
ATXN3-201ENST00000340660 Q9BRP9 147 aa4.94□□□□□ -1.62
ATXN3-201ENST00000340660 SND1-IT1Q9HBX3 110 aa4.94□□□□□ -1.62
ATXN3-201ENST00000340660 IGLV4-3A0A075B6K6 122 aa4.93□□□□□ -1.62
ATXN3-201ENST00000340660 MT4P47944 62 aa4.93□□□□□ -1.62
ATXN3-201ENST00000340660 EIF5A2Q9GZV4 153 aaKnown RBP4.93□□□□□ -1.62
ATXN3-201ENST00000340660 PAGE4O60829 102 aa4.92□□□□□ -1.62
ATXN3-201ENST00000340660 CD164Q04900 197 aa4.92□□□□□ -1.62
ATXN3-201ENST00000340660 TMUB2Q71RG4 321 aa4.92□□□□□ -1.62
ATXN3-201ENST00000340660 PPP1R2P9O14990 202 aa4.91□□□□□ -1.62
ATXN3-201ENST00000340660 RAB5AP20339 215 aa4.91□□□□□ -1.62
ATXN3-201ENST00000340660 RPL35P42766 123 aaKnown RBP4.91□□□□□ -1.62
ATXN3-201ENST00000340660 CDKN2A-AS1Q9UH64 79 aa4.91□□□□□ -1.62
ATXN3-201ENST00000340660 TRBV20OR9-2A0A075B6H5 130 aa4.9□□□□□ -1.63
ATXN3-201ENST00000340660 A0A087WXM4 84 aa4.9□□□□□ -1.63
ATXN3-201ENST00000340660 RAB4AP20338 218 aa4.9□□□□□ -1.63
ATXN3-201ENST00000340660 PFN2P35080 140 aa4.9□□□□□ -1.63
ATXN3-201ENST00000340660 KCNQ1DNQ9H478 68 aa4.9□□□□□ -1.63
ATXN3-201ENST00000340660 DSCR10P59022 87 aa4.89□□□□□ -1.63
ATXN3-201ENST00000340660 PPP1R1CQ8WVI7 109 aa4.89□□□□□ -1.63
ATXN3-201ENST00000340660 TMEM191AQ9H0A3 160 aa4.89□□□□□ -1.63
ATXN3-201ENST00000340660 Q9H521 79 aa4.89□□□□□ -1.63
ATXN3-201ENST00000340660 NDUFA13Q9P0J0 144 aa4.89□□□□□ -1.63
ATXN3-201ENST00000340660 MAP1LC3B2A6NCE7 125 aa4.88□□□□□ -1.63
ATXN3-201ENST00000340660 CENPWQ5EE01 88 aa4.88□□□□□ -1.63
ATXN3-201ENST00000340660 PCP2Q8IVA1 136 aa4.88□□□□□ -1.63
ATXN3-201ENST00000340660 ST20-AS1Q8NBB2 130 aa4.88□□□□□ -1.63
ATXN3-201ENST00000340660 MAP1LC3BQ9GZQ8 125 aa4.88□□□□□ -1.63
ATXN3-201ENST00000340660 TRAV9-1A0A075B6T8 112 aa4.87□□□□□ -1.63
ATXN3-201ENST00000340660 CNPY1Q3B7I2 92 aa4.87□□□□□ -1.63
ATXN3-201ENST00000340660 COX7B2Q8TF08 81 aa4.87□□□□□ -1.63
ATXN3-201ENST00000340660 TMEM141Q96I45 108 aa4.87□□□□□ -1.63
ATXN3-201ENST00000340660 MPC2O95563 127 aa4.86□□□□□ -1.63
ATXN3-201ENST00000340660 IFI27P40305 119 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-201ENST00000340660 TEX43Q6ZNM6 134 aa4.86□□□□□ -1.63
ATXN3-201ENST00000340660 AMN1Q8IY45 258 aa4.86□□□□□ -1.63
ATXN3-201ENST00000340660 A8MUU9 505 aa4.85□□□□□ -1.63
ATXN3-201ENST00000340660 GIPP09681 153 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-201ENST00000340660 Q96NJ1 140 aa4.85□□□□□ -1.63
ATXN3-201ENST00000340660 ALKAL2Q6UX46 152 aa4.84□□□□□ -1.63
ATXN3-201ENST00000340660 ZNF625Q96I27 306 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-201ENST00000340660 C2orf88Q9BSF0 95 aa4.84□□□□□ -1.63
ATXN3-201ENST00000340660 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
ATXN3-201ENST00000340660 IGFL1Q6UW32 110 aa4.83□□□□□ -1.64
ATXN3-201ENST00000340660 IMUPQ9GZP8 106 aa4.83□□□□□ -1.64
ATXN3-201ENST00000340660 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
ATXN3-201ENST00000340660 CENPXA8MT69 81 aa4.82□□□□□ -1.64
ATXN3-201ENST00000340660 TCAPO15273 167 aa4.82□□□□□ -1.64
ATXN3-201ENST00000340660 H2BFSP57053 126 aa4.82□□□□□ -1.64
ATXN3-201ENST00000340660 LCE3EQ5T5B0 92 aa4.82□□□□□ -1.64
ATXN3-201ENST00000340660 TRIQKQ629K1 86 aa4.82□□□□□ -1.64
ATXN3-201ENST00000340660 Q6ZRX8 168 aa4.81□□□□□ -1.64
ATXN3-201ENST00000340660 AMELXQ99217 191 aa4.81□□□□□ -1.64
ATXN3-201ENST00000340660 PFDN1O60925 122 aa4.8□□□□□ -1.64
ATXN3-201ENST00000340660 PPP1R17O96001 155 aa4.8□□□□□ -1.64
ATXN3-201ENST00000340660 HERVK_113P63121 156 aa4.8□□□□□ -1.64
ATXN3-201ENST00000340660 PDZD11Q5EBL8 140 aa4.8□□□□□ -1.64
ATXN3-201ENST00000340660 C2orf66Q6UXQ4 117 aa4.8□□□□□ -1.64
ATXN3-201ENST00000340660 ATP5LO75964 103 aa4.79□□□□□ -1.64
ATXN3-201ENST00000340660 PET100P0DJ07 73 aa4.79□□□□□ -1.64
ATXN3-201ENST00000340660 MTURNQ8N3F0 131 aa4.79□□□□□ -1.64
ATXN3-201ENST00000340660 TRBV10-3A0A0K0K1G6 114 aa4.78□□□□□ -1.64
ATXN3-201ENST00000340660 NCR3O14931 201 aa4.78□□□□□ -1.64
ATXN3-201ENST00000340660 SPRR1BP22528 89 aa4.78□□□□□ -1.64
ATXN3-201ENST00000340660 SMIM12Q96EX1 92 aa4.78□□□□□ -1.64
ATXN3-201ENST00000340660 ERG28Q9UKR5 140 aa4.78□□□□□ -1.64
ATXN3-201ENST00000340660 PLA2G10O15496 165 aa4.77□□□□□ -1.65
ATXN3-201ENST00000340660 GNG4P50150 75 aa4.77□□□□□ -1.65
ATXN3-201ENST00000340660 C11orf52Q96A22 123 aa4.77□□□□□ -1.65
ATXN3-201ENST00000340660 C20orf78Q9BR46 151 aa4.77□□□□□ -1.65
ATXN3-201ENST00000340660 SMIM2Q9BVW6 85 aa4.77□□□□□ -1.65
ATXN3-201ENST00000340660 SPRR2GQ9BYE4 73 aa4.77□□□□□ -1.65
ATXN3-201ENST00000340660 PRO1933Q9H354 126 aa4.77□□□□□ -1.65
ATXN3-201ENST00000340660 AKR1C8PQ5T2L2 129 aa4.76□□□□□ -1.65
ATXN3-201ENST00000340660 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
ATXN3-201ENST00000340660 RPS10P5Q9NQ39 176 aa4.76□□□□□ -1.65
ATXN3-201ENST00000340660 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
ATXN3-201ENST00000340660 A0A1B0GV50 99 aa4.75□□□□□ -1.65
ATXN3-201ENST00000340660 VCX2Q9H322 139 aa4.75□□□□□ -1.65
ATXN3-201ENST00000340660 TRBV24-1A0A075B6N3 115 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms