RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 Q6ZQT0 140 aa10.23□□□□□ -0.77
RRP1B-201ENST00000340648 LINC00208Q96KT6 92 aa10.23□□□□□ -0.77
RRP1B-201ENST00000340648 DOPEY1Q5JWR5 2465 aa10.21□□□□□ -0.78
RRP1B-201ENST00000340648 DEFB116Q30KQ4 102 aa10.2□□□□□ -0.78
RRP1B-201ENST00000340648 TRIOO75962 3097 aa10.2□□□□□ -0.78
RRP1B-201ENST00000340648 A6NED7 52 aa10.2□□□□□ -0.78
RRP1B-201ENST00000340648 C6orf48Q9UBA6 75 aa10.2□□□□□ -0.78
RRP1B-201ENST00000340648 PSPHP1O15172 72 aa10.19□□□□□ -0.78
RRP1B-201ENST00000340648 ACANP16112 2415 aa10.19□□□□□ -0.78
RRP1B-201ENST00000340648 MRPL55Q7Z7F7 128 aaKnown RBP10.18□□□□□ -0.78
RRP1B-201ENST00000340648 C2orf48Q96LS8 159 aa10.18□□□□□ -0.78
RRP1B-201ENST00000340648 REG3GQ6UW15 175 aa10.17□□□□□ -0.78
RRP1B-201ENST00000340648 SMIM29Q86T20 159 aa10.16□□□□□ -0.78
RRP1B-201ENST00000340648 LOC110117498A0A087WWA1 95 aa10.16□□□□□ -0.78
RRP1B-201ENST00000340648 KIAA0087Q14695 138 aa10.16□□□□□ -0.78
RRP1B-201ENST00000340648 ESRGQ1W209 222 aa10.16□□□□□ -0.78
RRP1B-201ENST00000340648 A0A087WSZ3 146 aa10.15□□□□□ -0.78
RRP1B-201ENST00000340648 X6R8D5 127 aa10.15□□□□□ -0.78
RRP1B-201ENST00000340648 TM2D3Q9BRN9 247 aa10.15□□□□□ -0.78
RRP1B-201ENST00000340648 PRO0628Q9UI54 55 aa10.15□□□□□ -0.79
RRP1B-201ENST00000340648 IGLV9-49A0A0B4J1Y8 123 aa10.14□□□□□ -0.79
RRP1B-201ENST00000340648 BCE1O60756 84 aa10.14□□□□□ -0.79
RRP1B-201ENST00000340648 PLAC8L1A1L4L8 177 aa10.14□□□□□ -0.79
RRP1B-201ENST00000340648 SPINK6Q6UWN8 80 aa10.14□□□□□ -0.79
RRP1B-201ENST00000340648 ELOF1P60002 83 aaKnown RBP10.13□□□□□ -0.79
RRP1B-201ENST00000340648 C9orf129Q5T035 196 aaKnown RBP10.13□□□□□ -0.79
RRP1B-201ENST00000340648 PRR15LQ9BU68 103 aa10.12□□□□□ -0.79
RRP1B-201ENST00000340648 VPS13AQ96RL7 3174 aa10.12□□□□□ -0.79
RRP1B-201ENST00000340648 C7orf33Q8WU49 177 aa10.12□□□□□ -0.79
RRP1B-201ENST00000340648 HCG22E2RYF7 251 aa10.11□□□□□ -0.79
RRP1B-201ENST00000340648 CASC2Q6XLA1 102 aa10.11□□□□□ -0.79
RRP1B-201ENST00000340648 WDFY4Q6ZS81 3184 aa10.11□□□□□ -0.79
RRP1B-201ENST00000340648 VCANP13611 3396 aa10.1□□□□□ -0.79
RRP1B-201ENST00000340648 FSHBP01225 129 aa10.1□□□□□ -0.79
RRP1B-201ENST00000340648 Q9BRP9 147 aa10.09□□□□□ -0.79
RRP1B-201ENST00000340648 PMAIP1Q13794 54 aa10.09□□□□□ -0.79
RRP1B-201ENST00000340648 PRLHP81277 87 aa10.08□□□□□ -0.8
RRP1B-201ENST00000340648 MGAQ8IWI9 3026 aa10.07□□□□□ -0.8
RRP1B-201ENST00000340648 H0Y9P7 68 aa10.07□□□□□ -0.8
RRP1B-201ENST00000340648 C22orf24Q9Y442 160 aa10.07□□□□□ -0.8
RRP1B-201ENST00000340648 LAMA1P25391 3075 aa10.07□□□□□ -0.8
RRP1B-201ENST00000340648 F8WDY8 70 aa10.07□□□□□ -0.8
RRP1B-201ENST00000340648 CELSR3Q9NYQ7 3312 aa10.06□□□□□ -0.8
RRP1B-201ENST00000340648 PCOTHQ58A44 107 aa10.06□□□□□ -0.8
RRP1B-201ENST00000340648 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
RRP1B-201ENST00000340648 IGLV6-57P01721 117 aa10.05□□□□□ -0.8
RRP1B-201ENST00000340648 M0R2N4 97 aa10.05□□□□□ -0.8
RRP1B-201ENST00000340648 C4orf48Q5BLP8 95 aa10.04□□□□□ -0.8
RRP1B-201ENST00000340648 CSNK1G2-AS1Q8NCQ2 148 aa10.04□□□□□ -0.8
RRP1B-201ENST00000340648 SZT2Q5T011 3432 aa10.03□□□□□ -0.8
RRP1B-201ENST00000340648 LINC00167Q96N53 147 aa10.03□□□□□ -0.8
RRP1B-201ENST00000340648 GIG44P09565 113 aaPredicted RBP10.02□□□□□ -0.81
RRP1B-201ENST00000340648 FAM104AQ969W3 186 aa10.02□□□□□ -0.81
RRP1B-201ENST00000340648 LINC01600Q96MT4 127 aa10.01□□□□□ -0.81
RRP1B-201ENST00000340648 EPG5Q9HCE0 2579 aa10□□□□□ -0.81
RRP1B-201ENST00000340648 IGHV6-1A0A0B4J1U7 121 aa10□□□□□ -0.81
RRP1B-201ENST00000340648 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
RRP1B-201ENST00000340648 SEC61GP60059 68 aa10□□□□□ -0.81
RRP1B-201ENST00000340648 LINC01556Q5JQF7 62 aa9.99□□□□□ -0.81
RRP1B-201ENST00000340648 VPREB1P12018 145 aa9.99□□□□□ -0.81
RRP1B-201ENST00000340648 ST20-AS1Q8NBB2 130 aa9.99□□□□□ -0.81
RRP1B-201ENST00000340648 Q8NBF4 154 aa9.98□□□□□ -0.81
RRP1B-201ENST00000340648 Q8NAQ8 132 aa9.98□□□□□ -0.81
RRP1B-201ENST00000340648 hDV103S1A0JD37 113 aa9.98□□□□□ -0.81
RRP1B-201ENST00000340648 NBEAQ8NFP9 2946 aa9.98□□□□□ -0.81
RRP1B-201ENST00000340648 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
RRP1B-201ENST00000340648 Q6ZRX8 168 aa9.97□□□□□ -0.81
RRP1B-201ENST00000340648 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
RRP1B-201ENST00000340648 DSPP15924 2871 aaKnown RBP9.97□□□□□ -0.81
RRP1B-201ENST00000340648 C1orf64Q8NEQ6 169 aa9.97□□□□□ -0.81
RRP1B-201ENST00000340648 Q6ZRP5 223 aa9.96□□□□□ -0.81
RRP1B-201ENST00000340648 A0A096LNT2 108 aa9.95□□□□□ -0.82
RRP1B-201ENST00000340648 KLKP1Q107X0 134 aa9.94□□□□□ -0.82
RRP1B-201ENST00000340648 H7BZZ5 65 aa9.94□□□□□ -0.82
RRP1B-201ENST00000340648 LINC00476Q8WZB0 136 aa9.94□□□□□ -0.82
RRP1B-201ENST00000340648 C19orf73Q9NVV2 129 aa9.93□□□□□ -0.82
RRP1B-201ENST00000340648 FRYQ5TBA9 3013 aa9.92□□□□□ -0.82
RRP1B-201ENST00000340648 A0A1B0GW54 56 aa9.92□□□□□ -0.82
RRP1B-201ENST00000340648 LINC00528Q8N1L1 170 aa9.91□□□□□ -0.82
RRP1B-201ENST00000340648 OBSCN-AS1Q96MR7 158 aa9.9□□□□□ -0.82
RRP1B-201ENST00000340648 FREM2Q5SZK8 3169 aa9.89□□□□□ -0.83
RRP1B-201ENST00000340648 H3BNG1 76 aa9.89□□□□□ -0.83
RRP1B-201ENST00000340648 SERTAD4-AS1Q5TG53 156 aa9.89□□□□□ -0.83
RRP1B-201ENST00000340648 LINC00336Q6ZUF6 198 aa9.89□□□□□ -0.83
RRP1B-201ENST00000340648 TRBV7-4A0A0J9YYF1 115 aa9.89□□□□□ -0.83
RRP1B-201ENST00000340648 FAM168BA1KXE4 195 aa9.88□□□□□ -0.83
RRP1B-201ENST00000340648 K7EQZ3 153 aa9.88□□□□□ -0.83
RRP1B-201ENST00000340648 RPL37AP61513 92 aaKnown RBP9.88□□□□□ -0.83
RRP1B-201ENST00000340648 CIRBP-AS1Q8TBR5 109 aa9.88□□□□□ -0.83
RRP1B-201ENST00000340648 ERC2-IT1O76042 136 aa9.88□□□□□ -0.83
RRP1B-201ENST00000340648 LIMD2Q9BT23 127 aa9.87□□□□□ -0.83
RRP1B-201ENST00000340648 CENPEQ02224 2701 aa9.86□□□□□ -0.83
RRP1B-201ENST00000340648 PRR34Q9NV39 138 aa9.86□□□□□ -0.83
RRP1B-201ENST00000340648 RETNLBQ9BQ08 111 aa9.86□□□□□ -0.83
RRP1B-201ENST00000340648 SPEGQ15772 3267 aa9.85□□□□□ -0.83
RRP1B-201ENST00000340648 LINC00612Q8N6U2 182 aa9.85□□□□□ -0.83
RRP1B-201ENST00000340648 F8P00451 2351 aa9.85□□□□□ -0.83
RRP1B-201ENST00000340648 KCNQ1DNQ9H478 68 aa9.83□□□□□ -0.84
RRP1B-201ENST00000340648 FASNP49327 2511 aaKnown RBP9.82□□□□□ -0.84
RRP1B-201ENST00000340648 FRYLO94915 3013 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms