RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 FAM19A5Q7Z5A7 132 aaPredicted RBP7.49□□□□□ -1.21
SPTLC1-202ENST00000337841 PLA2G2DQ9UNK4 145 aa7.49□□□□□ -1.21
SPTLC1-202ENST00000337841 A0A0J9YXY3 114 aa7.48□□□□□ -1.21
SPTLC1-202ENST00000337841 RPL24P83731 157 aaKnown RBP7.48□□□□□ -1.21
SPTLC1-202ENST00000337841 JOSD1Q15040 202 aaPredicted RBP7.48□□□□□ -1.21
SPTLC1-202ENST00000337841 LBHQ53QV2 105 aaPredicted RBP7.48□□□□□ -1.21
SPTLC1-202ENST00000337841 MIR7-3HGQ8N6C7 128 aa7.48□□□□□ -1.21
SPTLC1-202ENST00000337841 DNAH8Q96JB1 4490 aa7.47□□□□□ -1.21
SPTLC1-202ENST00000337841 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
SPTLC1-202ENST00000337841 KIAA1109Q2LD37 5005 aa7.47□□□□□ -1.21
SPTLC1-202ENST00000337841 M0QXV9 152 aa7.46□□□□□ -1.22
SPTLC1-202ENST00000337841 TIMM17BO60830 172 aa7.46□□□□□ -1.22
SPTLC1-202ENST00000337841 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.22
SPTLC1-202ENST00000337841 SERTAD4-AS1Q5TG53 156 aa7.46□□□□□ -1.22
SPTLC1-202ENST00000337841 Q5VSD8 79 aa7.46□□□□□ -1.22
SPTLC1-202ENST00000337841 SCGB1D4Q6XE38 83 aa7.46□□□□□ -1.22
SPTLC1-202ENST00000337841 PHF5AQ7RTV0 110 aaKnown RBP7.46□□□□□ -1.22
SPTLC1-202ENST00000337841 NKAPP1Q8N9T2 125 aa7.46□□□□□ -1.22
SPTLC1-202ENST00000337841 RYR1P21817 5038 aa7.45□□□□□ -1.22
SPTLC1-202ENST00000337841 KRTAP7-1Q8IUC3 87 aa7.45□□□□□ -1.22
SPTLC1-202ENST00000337841 TTTY13Q9BZ97 58 aa7.45□□□□□ -1.22
SPTLC1-202ENST00000337841 TP73-AS1Q9UF72 201 aa7.45□□□□□ -1.22
SPTLC1-202ENST00000337841 APOBP04114 4563 aaKnown RBP7.44□□□□□ -1.22
SPTLC1-202ENST00000337841 IGLV5-37A0A075B6J1 123 aa7.44□□□□□ -1.22
SPTLC1-202ENST00000337841 UBE2BP63146 152 aa7.44□□□□□ -1.22
SPTLC1-202ENST00000337841 PCP2Q8IVA1 136 aa7.44□□□□□ -1.22
SPTLC1-202ENST00000337841 BOD1L2Q8IYS8 172 aa7.44□□□□□ -1.22
SPTLC1-202ENST00000337841 MIEN1Q9BRT3 115 aa7.44□□□□□ -1.22
SPTLC1-202ENST00000337841 ADAMTSL4-AS1Q5T5F5 129 aa7.43□□□□□ -1.22
SPTLC1-202ENST00000337841 MRPL55Q7Z7F7 128 aaKnown RBP7.43□□□□□ -1.22
SPTLC1-202ENST00000337841 DAND5Q8N907 189 aa7.43□□□□□ -1.22
SPTLC1-202ENST00000337841 LOC107984156A0A0G2JMH3 177 aa7.42□□□□□ -1.22
SPTLC1-202ENST00000337841 VPREB1P12018 145 aa7.42□□□□□ -1.22
SPTLC1-202ENST00000337841 ARL17AQ8IVW1 177 aa7.42□□□□□ -1.22
SPTLC1-202ENST00000337841 VAMP8Q9BV40 100 aa7.42□□□□□ -1.22
SPTLC1-202ENST00000337841 KRTAP17-1Q9BYP8 105 aa7.42□□□□□ -1.22
SPTLC1-202ENST00000337841 TMEM238C9JI98 176 aa7.41□□□□□ -1.22
SPTLC1-202ENST00000337841 LINC00167Q96N53 147 aa7.41□□□□□ -1.22
SPTLC1-202ENST00000337841 GAGE10A6NGK3 116 aa7.4□□□□□ -1.22
SPTLC1-202ENST00000337841 M0R378 163 aa7.4□□□□□ -1.22
SPTLC1-202ENST00000337841 SPATA45Q537H7 98 aa7.4□□□□□ -1.22
SPTLC1-202ENST00000337841 PYY3Q5JQD4 70 aa7.4□□□□□ -1.22
SPTLC1-202ENST00000337841 Q6ZVH6 145 aa7.4□□□□□ -1.22
SPTLC1-202ENST00000337841 COPS9Q8WXC6 57 aa7.4□□□□□ -1.22
SPTLC1-202ENST00000337841 LITAFQ99732 161 aa7.4□□□□□ -1.22
SPTLC1-202ENST00000337841 PAM16Q9Y3D7 125 aa7.4□□□□□ -1.22
SPTLC1-202ENST00000337841 COX8AP10176 69 aa7.39□□□□□ -1.23
SPTLC1-202ENST00000337841 NPC2P61916 151 aa7.39□□□□□ -1.23
SPTLC1-202ENST00000337841 LINC00308Q8TCZ7 52 aa7.39□□□□□ -1.23
SPTLC1-202ENST00000337841 PSORS1C2Q9UIG4 136 aa7.39□□□□□ -1.23
SPTLC1-202ENST00000337841 HERC2O95714 4834 aa7.39□□□□□ -1.23
SPTLC1-202ENST00000337841 HSPG2P98160 4391 aa7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 RPL37AP8A6NKH3 93 aa7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 DLEU1O43261 78 aa7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 NDUFC2O95298 119 aa7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 INAFM2P0DMQ5 153 aa7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 IFITM1P13164 125 aa7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 PRR3P79522 188 aaKnown RBP7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 C1orf137Q5JT78 98 aa7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 SPANXDQ9BXN6 97 aa7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 SPANXCQ9NY87 97 aa7.38□□□□□ -1.23
SPTLC1-202ENST00000337841 Q8NDZ9 215 aa7.37□□□□□ -1.23
SPTLC1-202ENST00000337841 C14orf144Q96I85 54 aa7.37□□□□□ -1.23
SPTLC1-202ENST00000337841 IGLV1-50A0A075B6I6 118 aa7.36□□□□□ -1.23
SPTLC1-202ENST00000337841 TRBV10-2A0A0K0K1G8 114 aa7.36□□□□□ -1.23
SPTLC1-202ENST00000337841 KRTAP10-4P60372 401 aaPredicted RBP7.36□□□□□ -1.23
SPTLC1-202ENST00000337841 S100A12P80511 92 aa7.36□□□□□ -1.23
SPTLC1-202ENST00000337841 SOSTDC1Q6X4U4 206 aa7.36□□□□□ -1.23
SPTLC1-202ENST00000337841 KRTAP11-1Q8IUC1 163 aa7.36□□□□□ -1.23
SPTLC1-202ENST00000337841 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
SPTLC1-202ENST00000337841 NCR3O14931 201 aa7.35□□□□□ -1.23
SPTLC1-202ENST00000337841 SLC25A34Q6PIV7 304 aa7.35□□□□□ -1.23
SPTLC1-202ENST00000337841 MUSTN1Q8IVN3 82 aa7.35□□□□□ -1.23
SPTLC1-202ENST00000337841 LINC00518Q8N0U6 118 aa7.35□□□□□ -1.23
SPTLC1-202ENST00000337841 PPDPFQ9H3Y8 114 aa7.35□□□□□ -1.23
SPTLC1-202ENST00000337841 IGKV2-28A0A075B6P5 120 aa7.34□□□□□ -1.23
SPTLC1-202ENST00000337841 IGKV2D-28P01615 120 aa7.34□□□□□ -1.23
SPTLC1-202ENST00000337841 S100A7L2Q5SY68 101 aa7.34□□□□□ -1.23
SPTLC1-202ENST00000337841 XP32Q5T750 250 aa7.34□□□□□ -1.23
SPTLC1-202ENST00000337841 IGLV7-43P04211 117 aa7.33□□□□□ -1.24
SPTLC1-202ENST00000337841 CBY1Q9Y3M2 126 aa7.33□□□□□ -1.24
SPTLC1-202ENST00000337841 BCE1O60756 84 aa7.32□□□□□ -1.24
SPTLC1-202ENST00000337841 DDTP30046 118 aa7.32□□□□□ -1.24
SPTLC1-202ENST00000337841 REG3GQ6UW15 175 aa7.32□□□□□ -1.24
SPTLC1-202ENST00000337841 SPINK6Q6UWN8 80 aa7.32□□□□□ -1.24
SPTLC1-202ENST00000337841 HIST1H4GQ99525 98 aa7.32□□□□□ -1.24
SPTLC1-202ENST00000337841 FAT1Q14517 4588 aa7.31□□□□□ -1.24
SPTLC1-202ENST00000337841 TRBV10-3A0A0K0K1G6 114 aa7.31□□□□□ -1.24
SPTLC1-202ENST00000337841 OR13C6PQ8NH95 151 aa7.31□□□□□ -1.24
SPTLC1-202ENST00000337841 HIGD1BQ9P298 99 aa7.31□□□□□ -1.24
SPTLC1-202ENST00000337841 PRYO14603 147 aa7.3□□□□□ -1.24
SPTLC1-202ENST00000337841 RPL28P46779 137 aaKnown RBP7.3□□□□□ -1.24
SPTLC1-202ENST00000337841 TMEM126AQ9H061 195 aa7.3□□□□□ -1.24
SPTLC1-202ENST00000337841 KCNQ1DNQ9H478 68 aa7.3□□□□□ -1.24
SPTLC1-202ENST00000337841 ZNF861PO60384 105 aa7.29□□□□□ -1.24
SPTLC1-202ENST00000337841 IGLV6-57P01721 117 aa7.29□□□□□ -1.24
SPTLC1-202ENST00000337841 UBE2AP49459 152 aa7.29□□□□□ -1.24
SPTLC1-202ENST00000337841 HNRNPA3P51991 378 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms