RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 SNHG12Q9BXW3 62 aa11.1□□□□□ -0.63
CHGA-202ENST00000334654 TMEM238C9JI98 176 aa11.09□□□□□ -0.63
CHGA-202ENST00000334654 XGP55808 180 aa11.09□□□□□ -0.63
CHGA-202ENST00000334654 LINC00158P58513 81 aa11.09□□□□□ -0.63
CHGA-202ENST00000334654 XAGE1AQ9HD64 81 aa11.09□□□□□ -0.63
CHGA-202ENST00000334654 TP73-AS1Q9UF72 201 aa11.09□□□□□ -0.63
CHGA-202ENST00000334654 BVES-AS1Q5T3Y7 98 aa11.08□□□□□ -0.64
CHGA-202ENST00000334654 ADAMTSL4-AS1Q5T5F5 129 aa11.08□□□□□ -0.64
CHGA-202ENST00000334654 APOBP04114 4563 aaKnown RBP11.08□□□□□ -0.64
CHGA-202ENST00000334654 EPM2AB3EWF7 344 aa11.07□□□□□ -0.64
CHGA-202ENST00000334654 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHGA-202ENST00000334654 KRTAP7-1Q8IUC3 87 aa11.07□□□□□ -0.64
CHGA-202ENST00000334654 HIST1H4GQ99525 98 aa11.07□□□□□ -0.64
CHGA-202ENST00000334654 SND1-IT1Q9HBX3 110 aa11.07□□□□□ -0.64
CHGA-202ENST00000334654 LINC00474Q9P2X8 69 aa11.07□□□□□ -0.64
CHGA-202ENST00000334654 A0A087WYN8 130 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 A0A1W2PNN7 141 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 HAMPP81172 84 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 COL5A1-AS1Q5SY13 56 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 CEND1Q8N111 149 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 MIR7-3HGQ8N6C7 128 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 FAM168BA1KXE4 195 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 HINT1P49773 126 aaPredicted RBP11.06□□□□□ -0.64
CHGA-202ENST00000334654 SCXQ7RTU7 201 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 DAND5Q8N907 189 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 CIRBP-AS1Q8TBR5 109 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 COPS9Q8WXC6 57 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 PPDPFQ9H3Y8 114 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 BIRC6Q9NR09 4857 aa11.06□□□□□ -0.64
CHGA-202ENST00000334654 A6NDN8 102 aa11.05□□□□□ -0.64
CHGA-202ENST00000334654 PLAC8Q9NZF1 115 aa11.05□□□□□ -0.64
CHGA-202ENST00000334654 KIAA1109Q2LD37 5005 aa11.04□□□□□ -0.64
CHGA-202ENST00000334654 TMEM238LA0A1B0GVL6 79 aa11.04□□□□□ -0.64
CHGA-202ENST00000334654 A6NJY4 79 aa11.04□□□□□ -0.64
CHGA-202ENST00000334654 EIF4EBP3O60516 100 aaPredicted RBP11.03□□□□□ -0.64
CHGA-202ENST00000334654 IFITM1P13164 125 aa11.03□□□□□ -0.64
CHGA-202ENST00000334654 Q8NDZ9 215 aa11.03□□□□□ -0.64
CHGA-202ENST00000334654 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
CHGA-202ENST00000334654 SPANXDQ9BXN6 97 aa11.03□□□□□ -0.64
CHGA-202ENST00000334654 SPANXCQ9NY87 97 aa11.03□□□□□ -0.64
CHGA-202ENST00000334654 LOC107984156A0A0G2JMH3 177 aa11.02□□□□□ -0.65
CHGA-202ENST00000334654 CDK2AP2O75956 126 aa11.02□□□□□ -0.65
CHGA-202ENST00000334654 SERTAD4-AS1Q5TG53 156 aa11.02□□□□□ -0.65
CHGA-202ENST00000334654 ARL17AQ8IVW1 177 aa11.02□□□□□ -0.65
CHGA-202ENST00000334654 RYR1P21817 5038 aa11.02□□□□□ -0.65
CHGA-202ENST00000334654 SOSTDC1Q6X4U4 206 aa11.01□□□□□ -0.65
CHGA-202ENST00000334654 PLA2G2DQ9UNK4 145 aa11.01□□□□□ -0.65
CHGA-202ENST00000334654 RPL24P83731 157 aaKnown RBP11□□□□□ -0.65
CHGA-202ENST00000334654 BATFQ16520 125 aa11□□□□□ -0.65
CHGA-202ENST00000334654 FAM19A5Q7Z5A7 132 aaPredicted RBP10.99□□□□□ -0.65
CHGA-202ENST00000334654 VPREB1P12018 145 aa10.98□□□□□ -0.65
CHGA-202ENST00000334654 LINC00308Q8TCZ7 52 aa10.98□□□□□ -0.65
CHGA-202ENST00000334654 IGLV5-37A0A075B6J1 123 aa10.97□□□□□ -0.65
CHGA-202ENST00000334654 NPC2P61916 151 aa10.97□□□□□ -0.65
CHGA-202ENST00000334654 HSPG2P98160 4391 aa10.96□□□□□ -0.65
CHGA-202ENST00000334654 A0A1B0GWB2 263 aa10.96□□□□□ -0.65
CHGA-202ENST00000334654 FXYD2P54710 66 aa10.95□□□□□ -0.66
CHGA-202ENST00000334654 KRTAP17-1Q9BYP8 105 aa10.95□□□□□ -0.66
CHGA-202ENST00000334654 C22orf24Q9Y442 160 aa10.95□□□□□ -0.66
CHGA-202ENST00000334654 PHF5AQ7RTV0 110 aaKnown RBP10.94□□□□□ -0.66
CHGA-202ENST00000334654 PRR3P79522 188 aaKnown RBP10.93□□□□□ -0.66
CHGA-202ENST00000334654 MUSTN1Q8IVN3 82 aa10.93□□□□□ -0.66
CHGA-202ENST00000334654 M0QXV9 152 aa10.93□□□□□ -0.66
CHGA-202ENST00000334654 SMR3BP02814 79 aaPredicted RBP10.92□□□□□ -0.66
CHGA-202ENST00000334654 KRTAP11-1Q8IUC1 163 aa10.92□□□□□ -0.66
CHGA-202ENST00000334654 NDUFC2O95298 119 aa10.9□□□□□ -0.66
CHGA-202ENST00000334654 MRPL55Q7Z7F7 128 aaKnown RBP10.9□□□□□ -0.66
CHGA-202ENST00000334654 NHP2Q9NX24 153 aaKnown RBP10.9□□□□□ -0.66
CHGA-202ENST00000334654 A0A0B4J2C4 111 aa10.89□□□□□ -0.67
CHGA-202ENST00000334654 C7orf33Q8WU49 177 aa10.89□□□□□ -0.67
CHGA-202ENST00000334654 LINC00167Q96N53 147 aa10.89□□□□□ -0.67
CHGA-202ENST00000334654 A4D1N5 150 aa10.88□□□□□ -0.67
CHGA-202ENST00000334654 TAX1BP3O14907 124 aa10.88□□□□□ -0.67
CHGA-202ENST00000334654 NKAPP1Q8N9T2 125 aa10.88□□□□□ -0.67
CHGA-202ENST00000334654 IGKV2-28A0A075B6P5 120 aa10.87□□□□□ -0.67
CHGA-202ENST00000334654 IGKV2D-28P01615 120 aa10.87□□□□□ -0.67
CHGA-202ENST00000334654 FAT1Q14517 4588 aa10.87□□□□□ -0.67
CHGA-202ENST00000334654 GAGE10A6NGK3 116 aa10.87□□□□□ -0.67
CHGA-202ENST00000334654 M0R378 163 aa10.87□□□□□ -0.67
CHGA-202ENST00000334654 NCR3O14931 201 aa10.87□□□□□ -0.67
CHGA-202ENST00000334654 CFC1BP0CG36 223 aa10.87□□□□□ -0.67
CHGA-202ENST00000334654 CFC1P0CG37 223 aa10.87□□□□□ -0.67
CHGA-202ENST00000334654 PRO1854Q9UHT4 67 aa10.87□□□□□ -0.67
CHGA-202ENST00000334654 C9orf118A6NHY6 69 aa10.86□□□□□ -0.67
CHGA-202ENST00000334654 LINC00528Q8N1L1 170 aa10.86□□□□□ -0.67
CHGA-202ENST00000334654 TRBV10-2A0A0K0K1G8 114 aa10.85□□□□□ -0.67
CHGA-202ENST00000334654 VPS13BQ7Z7G8 4022 aa10.85□□□□□ -0.67
CHGA-202ENST00000334654 IGLV1-50A0A075B6I6 118 aa10.84□□□□□ -0.67
CHGA-202ENST00000334654 RPL37AP8A6NKH3 93 aa10.84□□□□□ -0.67
CHGA-202ENST00000334654 RAB37Q96AX2 223 aa10.84□□□□□ -0.67
CHGA-202ENST00000334654 KRTAP10-4P60372 401 aaPredicted RBP10.83□□□□□ -0.68
CHGA-202ENST00000334654 PSORS1C2Q9UIG4 136 aa10.82□□□□□ -0.68
CHGA-202ENST00000334654 HERC2O95714 4834 aa10.82□□□□□ -0.68
CHGA-202ENST00000334654 UBE2BP63146 152 aa10.81□□□□□ -0.68
CHGA-202ENST00000334654 Q8N1X5 172 aa10.81□□□□□ -0.68
CHGA-202ENST00000334654 LINC00337Q8N6G1 96 aa10.81□□□□□ -0.68
CHGA-202ENST00000334654 TRBV10-3A0A0K0K1G6 114 aa10.81□□□□□ -0.68
CHGA-202ENST00000334654 IGLV6-57P01721 117 aa10.81□□□□□ -0.68
CHGA-202ENST00000334654 SRRM2Q9UQ35 2752 aaKnown RBP10.8□□□□□ -0.68
CHGA-202ENST00000334654 TRAV13-2A0A0B4J235 113 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms