RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 RBM3P98179 157 aaKnown RBP16.11■□□□□ 0.17
TSKU-201ENST00000333090 TENM1Q9UKZ4 2725 aa16.11■□□□□ 0.17
TSKU-201ENST00000333090 LAMTOR3Q9UHA4 124 aa16.1■□□□□ 0.17
TSKU-201ENST00000333090 X6R8D5 127 aa16.1■□□□□ 0.17
TSKU-201ENST00000333090 OXTP01178 125 aa16.09■□□□□ 0.17
TSKU-201ENST00000333090 C16orf95Q9H693 158 aa16.09■□□□□ 0.17
TSKU-201ENST00000333090 Q6ZQT0 140 aa16.08■□□□□ 0.16
TSKU-201ENST00000333090 DEFB4AO15263 64 aa16.08■□□□□ 0.16
TSKU-201ENST00000333090 C10orf25Q5T742 122 aa16.08■□□□□ 0.16
TSKU-201ENST00000333090 C6orf223Q8N319 242 aa16.08■□□□□ 0.16
TSKU-201ENST00000333090 UNQ6190/PRO20217Q6UXQ8 127 aa16.07■□□□□ 0.16
TSKU-201ENST00000333090 TRBV10-3A0A0K0K1G6 114 aa16.06■□□□□ 0.16
TSKU-201ENST00000333090 C5orf47Q569G3 176 aa16.06■□□□□ 0.16
TSKU-201ENST00000333090 C20orf197Q8N268 126 aa16.06■□□□□ 0.16
TSKU-201ENST00000333090 M0R2N4 97 aa16.06■□□□□ 0.16
TSKU-201ENST00000333090 ZNF561-AS1K7EIQ3 104 aa16.05■□□□□ 0.16
TSKU-201ENST00000333090 SPATA3Q8NHX4 192 aa16.04■□□□□ 0.16
TSKU-201ENST00000333090 TRRAPQ9Y4A5 3859 aa16.04■□□□□ 0.16
TSKU-201ENST00000333090 KRTAP10-3P60369 221 aa16.03■□□□□ 0.16
TSKU-201ENST00000333090 SPAG11BQ08648 103 aa16.03■□□□□ 0.16
TSKU-201ENST00000333090 HAMPP81172 84 aa16.02■□□□□ 0.15
TSKU-201ENST00000333090 Q6ZQY7 126 aa16.02■□□□□ 0.15
TSKU-201ENST00000333090 LOC110117498A0A087WWA1 95 aa16■□□□□ 0.15
TSKU-201ENST00000333090 LINC00482Q8N8I6 264 aa16■□□□□ 0.15
TSKU-201ENST00000333090 LINC01547P58512 204 aaPredicted RBP15.99■□□□□ 0.15
TSKU-201ENST00000333090 CYSRT1A8MQ03 144 aa15.99■□□□□ 0.15
TSKU-201ENST00000333090 LYRM9A8MSI8 78 aa15.97■□□□□ 0.15
TSKU-201ENST00000333090 IGLV6-57P01721 117 aa15.97■□□□□ 0.15
TSKU-201ENST00000333090 DEFB135Q30KP9 77 aa15.97■□□□□ 0.15
TSKU-201ENST00000333090 Q6ZVQ6 151 aa15.97■□□□□ 0.15
TSKU-201ENST00000333090 KMT2BQ9UMN6 2715 aaPredicted RBP15.96■□□□□ 0.15
TSKU-201ENST00000333090 NDUFC2-KCTD14E9PQ53 114 aa15.95■□□□□ 0.14
TSKU-201ENST00000333090 ATRQ13535 2644 aa15.94■□□□□ 0.14
TSKU-201ENST00000333090 DAD1P61803 113 aa15.94■□□□□ 0.14
TSKU-201ENST00000333090 A0A0J9YWU9 116 aa15.93■□□□□ 0.14
TSKU-201ENST00000333090 IGHV4-30-4P0DP06 118 aa15.93■□□□□ 0.14
TSKU-201ENST00000333090 J3QKU1 62 aa15.92■□□□□ 0.14
TSKU-201ENST00000333090 C4orf26Q17RF5 130 aa15.92■□□□□ 0.14
TSKU-201ENST00000333090 XAGE1AQ9HD64 81 aa15.92■□□□□ 0.14
TSKU-201ENST00000333090 KLK12Q9UKR0 248 aa15.91■□□□□ 0.14
TSKU-201ENST00000333090 TRAV7A0A075B6U4 112 aa15.91■□□□□ 0.14
TSKU-201ENST00000333090 HTN3P15516 51 aa15.91■□□□□ 0.14
TSKU-201ENST00000333090 TRAV10A0A0B4J240 114 aa15.9■□□□□ 0.14
TSKU-201ENST00000333090 MUC7Q8TAX7 377 aa15.9■□□□□ 0.14
TSKU-201ENST00000333090 FAM236DA0A1B0GTK5 79 aa15.89■□□□□ 0.13
TSKU-201ENST00000333090 FAM236CP0DP71 79 aa15.89■□□□□ 0.13
TSKU-201ENST00000333090 DIRC1Q969H9 104 aa15.89■□□□□ 0.13
TSKU-201ENST00000333090 CELA1Q9UNI1 258 aa15.88■□□□□ 0.13
TSKU-201ENST00000333090 Q5XG85 94 aa15.88■□□□□ 0.13
TSKU-201ENST00000333090 NSD1Q96L73 2696 aaPredicted RBP15.88■□□□□ 0.13
TSKU-201ENST00000333090 PDE6GP18545 87 aa15.88■□□□□ 0.13
TSKU-201ENST00000333090 C9orf66Q5T8R8 295 aa15.87■□□□□ 0.13
TSKU-201ENST00000333090 H7BZZ5 65 aa15.86■□□□□ 0.13
TSKU-201ENST00000333090 HRCT1Q6UXD1 115 aa15.86■□□□□ 0.13
TSKU-201ENST00000333090 SCXQ7RTU7 201 aa15.86■□□□□ 0.13
TSKU-201ENST00000333090 C6orf48Q9UBA6 75 aa15.85■□□□□ 0.13
TSKU-201ENST00000333090 BCE1O60756 84 aa15.85■□□□□ 0.13
TSKU-201ENST00000333090 SNURFQ9Y675 71 aa15.85■□□□□ 0.13
TSKU-201ENST00000333090 LELP1Q5T871 98 aa15.84■□□□□ 0.13
TSKU-201ENST00000333090 ZNF73O43830 326 aaPredicted RBP15.84■□□□□ 0.13
TSKU-201ENST00000333090 CXCL6P80162 114 aa15.84■□□□□ 0.13
TSKU-201ENST00000333090 HIVEP1P15822 2718 aa15.83■□□□□ 0.12
TSKU-201ENST00000333090 H3BQ85 93 aa15.82■□□□□ 0.12
TSKU-201ENST00000333090 PRR34Q9NV39 138 aa15.82■□□□□ 0.12
TSKU-201ENST00000333090 COX7BP24311 80 aa15.81■□□□□ 0.12
TSKU-201ENST00000333090 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.81■□□□□ 0.12
TSKU-201ENST00000333090 GVQW2A0A096LPI5 108 aaPredicted RBP15.8■□□□□ 0.12
TSKU-201ENST00000333090 TRBV7-4A0A0J9YYF1 115 aa15.8■□□□□ 0.12
TSKU-201ENST00000333090 INAFM1C9JVW0 142 aa15.8■□□□□ 0.12
TSKU-201ENST00000333090 RMI2Q96E14 147 aa15.8■□□□□ 0.12
TSKU-201ENST00000333090 KLKP1Q107X0 134 aa15.8■□□□□ 0.12
TSKU-201ENST00000333090 APOC4P55056 127 aa15.77■□□□□ 0.11
TSKU-201ENST00000333090 ELOF1P60002 83 aaKnown RBP15.77■□□□□ 0.11
TSKU-201ENST00000333090 Q8NAQ8 132 aa15.77■□□□□ 0.11
TSKU-201ENST00000333090 HIGD2BQ4VC39 106 aa15.76■□□□□ 0.11
TSKU-201ENST00000333090 TEP1Q99973 2627 aaKnown RBP15.76■□□□□ 0.11
TSKU-201ENST00000333090 TM2D3Q9BRN9 247 aa15.75■□□□□ 0.11
TSKU-201ENST00000333090 SERP1Q9Y6X1 66 aa15.74■□□□□ 0.11
TSKU-201ENST00000333090 SPART-AS1P0CW21 52 aa15.74■□□□□ 0.11
TSKU-201ENST00000333090 F8WEM9 126 aa15.74■□□□□ 0.11
TSKU-201ENST00000333090 CAMK2N2Q96S95 79 aa15.72■□□□□ 0.11
TSKU-201ENST00000333090 MIFP14174 115 aa15.71■□□□□ 0.11
TSKU-201ENST00000333090 VPREB1P12018 145 aa15.71■□□□□ 0.11
TSKU-201ENST00000333090 TRBV7-6A0A0J9YX20 115 aa15.68■□□□□ 0.1
TSKU-201ENST00000333090 EPM2AB3EWF7 344 aa15.68■□□□□ 0.1
TSKU-201ENST00000333090 WIPF1O43516 503 aa15.67■□□□□ 0.1
TSKU-201ENST00000333090 Q8N9L7 120 aa15.67■□□□□ 0.1
TSKU-201ENST00000333090 M0R378 163 aa15.65■□□□□ 0.1
TSKU-201ENST00000333090 PKD1L1Q8TDX9 2849 aa15.65■□□□□ 0.1
TSKU-201ENST00000333090 NREPQ16612 68 aa15.64■□□□□ 0.09
TSKU-201ENST00000333090 Q6ZRU5 148 aa15.64■□□□□ 0.09
TSKU-201ENST00000333090 LINC00528Q8N1L1 170 aa15.64■□□□□ 0.09
TSKU-201ENST00000333090 BPY2O14599 106 aa15.63■□□□□ 0.09
TSKU-201ENST00000333090 WFDC10BQ8IUB3 73 aa15.63■□□□□ 0.09
TSKU-201ENST00000333090 EGFEM1PQ0D2K5 195 aa15.62■□□□□ 0.09
TSKU-201ENST00000333090 NDUFC1O43677 76 aa15.59■□□□□ 0.09
TSKU-201ENST00000333090 TMEM254Q8TBM7 123 aa15.58■□□□□ 0.08
TSKU-201ENST00000333090 ANK2Q01484 3957 aa15.57■□□□□ 0.08
TSKU-201ENST00000333090 C3orf84H3BNL1 204 aa15.56■□□□□ 0.08
TSKU-201ENST00000333090 C15orf56Q8N910 161 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms