RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 Q8NAQ8 132 aa6.62□□□□□ -1.35
SS18L1-201ENST00000331758 C3orf22Q8N5N4 141 aa6.61□□□□□ -1.35
SS18L1-201ENST00000331758 FAM19A5Q7Z5A7 132 aaPredicted RBP6.61□□□□□ -1.35
SS18L1-201ENST00000331758 ATP5EP2Q5VTU8 51 aa6.61□□□□□ -1.35
SS18L1-201ENST00000331758 SDIM1Q6ZPB5 146 aa6.61□□□□□ -1.35
SS18L1-201ENST00000331758 PDE6GP18545 87 aa6.6□□□□□ -1.35
SS18L1-201ENST00000331758 DCHS2Q6V1P9 2916 aa6.6□□□□□ -1.35
SS18L1-201ENST00000331758 COX17Q14061 63 aa6.6□□□□□ -1.35
SS18L1-201ENST00000331758 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
SS18L1-201ENST00000331758 ASH1LQ9NR48 2969 aaKnown RBP6.6□□□□□ -1.35
SS18L1-201ENST00000331758 TRAV23DV6A0A075B6W5 121 aa6.59□□□□□ -1.35
SS18L1-201ENST00000331758 Q6ZQY7 126 aa6.59□□□□□ -1.35
SS18L1-201ENST00000331758 SPATA3Q8NHX4 192 aa6.59□□□□□ -1.35
SS18L1-201ENST00000331758 CELSR2Q9HCU4 2923 aa6.58□□□□□ -1.36
SS18L1-201ENST00000331758 IGLV5-45A0A087WSX0 123 aa6.58□□□□□ -1.36
SS18L1-201ENST00000331758 UBE2AP49459 152 aa6.58□□□□□ -1.36
SS18L1-201ENST00000331758 ESRGQ1W209 222 aa6.58□□□□□ -1.36
SS18L1-201ENST00000331758 C14orf177Q52M58 125 aa6.58□□□□□ -1.36
SS18L1-201ENST00000331758 PLAC8L1A1L4L8 177 aa6.58□□□□□ -1.36
SS18L1-201ENST00000331758 NF1P21359 2839 aa6.58□□□□□ -1.36
SS18L1-201ENST00000331758 TRBV7-7A0A0K0K1E9 115 aa6.58□□□□□ -1.36
SS18L1-201ENST00000331758 LINC00337Q8N6G1 96 aa6.57□□□□□ -1.36
SS18L1-201ENST00000331758 RPL37AP8A6NKH3 93 aa6.57□□□□□ -1.36
SS18L1-201ENST00000331758 UPK3BQ9BT76 320 aa6.57□□□□□ -1.36
SS18L1-201ENST00000331758 ZFHX4Q86UP3 3567 aa6.57□□□□□ -1.36
SS18L1-201ENST00000331758 EGFEM1PQ0D2K5 195 aa6.56□□□□□ -1.36
SS18L1-201ENST00000331758 C20orf197Q8N268 126 aa6.56□□□□□ -1.36
SS18L1-201ENST00000331758 M0R378 163 aa6.56□□□□□ -1.36
SS18L1-201ENST00000331758 USP17L23D6RBM5 183 aa6.56□□□□□ -1.36
SS18L1-201ENST00000331758 RPL28P46779 137 aaKnown RBP6.56□□□□□ -1.36
SS18L1-201ENST00000331758 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
SS18L1-201ENST00000331758 COX7CP15954 63 aa6.55□□□□□ -1.36
SS18L1-201ENST00000331758 SOSTDC1Q6X4U4 206 aa6.55□□□□□ -1.36
SS18L1-201ENST00000331758 HIVEP1P15822 2718 aa6.55□□□□□ -1.36
SS18L1-201ENST00000331758 ZNF73O43830 326 aaPredicted RBP6.55□□□□□ -1.36
SS18L1-201ENST00000331758 Q6JHZ5 121 aa6.54□□□□□ -1.36
SS18L1-201ENST00000331758 FAM19A1Q7Z5A9 133 aa6.54□□□□□ -1.36
SS18L1-201ENST00000331758 A0A096LNI7 61 aa6.54□□□□□ -1.36
SS18L1-201ENST00000331758 NDUFB1O75438 58 aa6.54□□□□□ -1.36
SS18L1-201ENST00000331758 KRTAP10-11P60412 298 aa6.54□□□□□ -1.36
SS18L1-201ENST00000331758 Q6ZRU5 148 aa6.54□□□□□ -1.36
SS18L1-201ENST00000331758 A0A087WYN8 130 aa6.54□□□□□ -1.36
SS18L1-201ENST00000331758 ENHOQ6UWT2 76 aa6.54□□□□□ -1.36
SS18L1-201ENST00000331758 MUC7Q8TAX7 377 aa6.53□□□□□ -1.36
SS18L1-201ENST00000331758 SERP2Q8N6R1 65 aa6.53□□□□□ -1.36
SS18L1-201ENST00000331758 PPDPFQ9H3Y8 114 aa6.53□□□□□ -1.36
SS18L1-201ENST00000331758 C10orf25Q5T742 122 aa6.52□□□□□ -1.36
SS18L1-201ENST00000331758 MP68P56378 58 aa6.52□□□□□ -1.37
SS18L1-201ENST00000331758 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
SS18L1-201ENST00000331758 NSD1Q96L73 2696 aaPredicted RBP6.52□□□□□ -1.37
SS18L1-201ENST00000331758 NDUFC2-KCTD14E9PQ53 114 aa6.52□□□□□ -1.37
SS18L1-201ENST00000331758 BPY2O14599 106 aa6.52□□□□□ -1.37
SS18L1-201ENST00000331758 LOC107984640A0A0U1RRK4 108 aa6.52□□□□□ -1.37
SS18L1-201ENST00000331758 LY6G6CO95867 125 aa6.52□□□□□ -1.37
SS18L1-201ENST00000331758 C5orf47Q569G3 176 aa6.52□□□□□ -1.37
SS18L1-201ENST00000331758 LINC01561Q8N1V8 128 aa6.52□□□□□ -1.37
SS18L1-201ENST00000331758 FBN2P35556 2912 aa6.52□□□□□ -1.37
SS18L1-201ENST00000331758 LINC01600Q96MT4 127 aa6.51□□□□□ -1.37
SS18L1-201ENST00000331758 LINC01556Q5JQF7 62 aa6.51□□□□□ -1.37
SS18L1-201ENST00000331758 A0A087WVE0 104 aa6.5□□□□□ -1.37
SS18L1-201ENST00000331758 EIF4EBP3O60516 100 aaPredicted RBP6.5□□□□□ -1.37
SS18L1-201ENST00000331758 LITAFQ99732 161 aa6.5□□□□□ -1.37
SS18L1-201ENST00000331758 NDUFC2O95298 119 aa6.5□□□□□ -1.37
SS18L1-201ENST00000331758 NUPR2A6NF83 97 aa6.5□□□□□ -1.37
SS18L1-201ENST00000331758 SCXQ7RTU7 201 aa6.5□□□□□ -1.37
SS18L1-201ENST00000331758 Q8N814 137 aa6.5□□□□□ -1.37
SS18L1-201ENST00000331758 NDUFS5O43920 106 aa6.49□□□□□ -1.37
SS18L1-201ENST00000331758 FAM236DA0A1B0GTK5 79 aa6.49□□□□□ -1.37
SS18L1-201ENST00000331758 H3BNG1 76 aa6.49□□□□□ -1.37
SS18L1-201ENST00000331758 FAM236CP0DP71 79 aa6.49□□□□□ -1.37
SS18L1-201ENST00000331758 C2orf48Q96LS8 159 aa6.49□□□□□ -1.37
SS18L1-201ENST00000331758 F8WDY8 70 aa6.48□□□□□ -1.37
SS18L1-201ENST00000331758 CCKP06307 115 aa6.48□□□□□ -1.37
SS18L1-201ENST00000331758 C6orf48Q9UBA6 75 aa6.48□□□□□ -1.37
SS18L1-201ENST00000331758 LINC00612Q8N6U2 182 aa6.48□□□□□ -1.37
SS18L1-201ENST00000331758 B9D2Q9BPU9 175 aa6.47□□□□□ -1.37
SS18L1-201ENST00000331758 C3orf84H3BNL1 204 aa6.46□□□□□ -1.37
SS18L1-201ENST00000331758 K7EIL1 84 aa6.46□□□□□ -1.37
SS18L1-201ENST00000331758 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.46□□□□□ -1.38
SS18L1-201ENST00000331758 LINC00588Q9Y4M8 146 aa6.46□□□□□ -1.38
SS18L1-201ENST00000331758 WIPF1O43516 503 aa6.45□□□□□ -1.38
SS18L1-201ENST00000331758 FAM218AQ96MZ4 157 aa6.45□□□□□ -1.38
SS18L1-201ENST00000331758 NIPBLQ6KC79 2804 aaeCLIP6.45□□□□□ -1.38
SS18L1-201ENST00000331758 MXRA5Q9NR99 2828 aa6.44□□□□□ -1.38
SS18L1-201ENST00000331758 DHRS4-AS1Q9P1J3 65 aa6.44□□□□□ -1.38
SS18L1-201ENST00000331758 FAM19A3Q7Z5A8 133 aa6.44□□□□□ -1.38
SS18L1-201ENST00000331758 BRK1Q8WUW1 75 aa6.43□□□□□ -1.38
SS18L1-201ENST00000331758 LRCOL1A6NCL2 159 aa6.43□□□□□ -1.38
SS18L1-201ENST00000331758 NDUFC1O43677 76 aa6.43□□□□□ -1.38
SS18L1-201ENST00000331758 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
SS18L1-201ENST00000331758 LINC00575Q6W349 94 aa6.43□□□□□ -1.38
SS18L1-201ENST00000331758 NHLRC4P0CG21 123 aaPredicted RBP6.42□□□□□ -1.38
SS18L1-201ENST00000331758 CRYGAP11844 174 aa6.42□□□□□ -1.38
SS18L1-201ENST00000331758 MDFIQ99750 246 aa6.42□□□□□ -1.38
SS18L1-201ENST00000331758 RPS28P62857 69 aaKnown RBP6.41□□□□□ -1.38
SS18L1-201ENST00000331758 SNURFQ9Y675 71 aa6.41□□□□□ -1.38
SS18L1-201ENST00000331758 MRPL55Q7Z7F7 128 aaKnown RBP6.41□□□□□ -1.38
SS18L1-201ENST00000331758 H0Y9J4 135 aa6.41□□□□□ -1.38
SS18L1-201ENST00000331758 BCE1O60756 84 aa6.4□□□□□ -1.38
SS18L1-201ENST00000331758 KIAA0087Q14695 138 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms