RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 KLK12Q9UKR0 248 aa6.38□□□□□ -1.39
C11orf54-201ENST00000331239 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
C11orf54-201ENST00000331239 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
C11orf54-201ENST00000331239 CSMD3Q7Z407 3707 aa6.37□□□□□ -1.39
C11orf54-201ENST00000331239 Q6ZR54 194 aa6.37□□□□□ -1.39
C11orf54-201ENST00000331239 TOMM7Q9P0U1 55 aa6.37□□□□□ -1.39
C11orf54-201ENST00000331239 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
C11orf54-201ENST00000331239 OR13C6PQ8NH95 151 aa6.36□□□□□ -1.39
C11orf54-201ENST00000331239 STARD9Q9P2P6 4700 aa6.36□□□□□ -1.39
C11orf54-201ENST00000331239 MIR7-3HGQ8N6C7 128 aa6.36□□□□□ -1.39
C11orf54-201ENST00000331239 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
C11orf54-201ENST00000331239 PLECQ15149 4684 aaKnown RBP6.35□□□□□ -1.39
C11orf54-201ENST00000331239 A0A087WZ39 114 aa6.35□□□□□ -1.39
C11orf54-201ENST00000331239 SNCGO76070 127 aa6.35□□□□□ -1.39
C11orf54-201ENST00000331239 CHCHD10Q8WYQ3 142 aaPredicted RBP6.35□□□□□ -1.39
C11orf54-201ENST00000331239 TRAV13-2A0A0B4J235 113 aa6.35□□□□□ -1.39
C11orf54-201ENST00000331239 LCE6AA0A183 80 aa6.34□□□□□ -1.39
C11orf54-201ENST00000331239 FAM240AA0A1B0GVK7 77 aa6.34□□□□□ -1.39
C11orf54-201ENST00000331239 V9GYY9 64 aa6.34□□□□□ -1.39
C11orf54-201ENST00000331239 ALMS1Q8TCU4 4167 aa6.34□□□□□ -1.39
C11orf54-201ENST00000331239 TRACP01848 142 aa6.34□□□□□ -1.39
C11orf54-201ENST00000331239 KRTAP26-1Q6PEX3 210 aa6.34□□□□□ -1.39
C11orf54-201ENST00000331239 SND1-IT1Q9HBX3 110 aa6.34□□□□□ -1.39
C11orf54-201ENST00000331239 DNAH6Q9C0G6 4158 aa6.33□□□□□ -1.4
C11orf54-201ENST00000331239 LINC00158P58513 81 aa6.33□□□□□ -1.4
C11orf54-201ENST00000331239 C5orf38Q86SI9 138 aa6.33□□□□□ -1.4
C11orf54-201ENST00000331239 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
C11orf54-201ENST00000331239 LY6G6CO95867 125 aa6.33□□□□□ -1.4
C11orf54-201ENST00000331239 LINC00337Q8N6G1 96 aa6.33□□□□□ -1.4
C11orf54-201ENST00000331239 RPL28P46779 137 aaKnown RBP6.32□□□□□ -1.4
C11orf54-201ENST00000331239 GAGE2BQ13066 116 aa6.32□□□□□ -1.4
C11orf54-201ENST00000331239 GAGE2EQ4V326 116 aa6.32□□□□□ -1.4
C11orf54-201ENST00000331239 C14orf177Q52M58 125 aa6.32□□□□□ -1.4
C11orf54-201ENST00000331239 Q8N3U1 123 aa6.32□□□□□ -1.4
C11orf54-201ENST00000331239 GAGE2DQ9UEU5 116 aa6.32□□□□□ -1.4
C11orf54-201ENST00000331239 IGKV2-28A0A075B6P5 120 aa6.32□□□□□ -1.4
C11orf54-201ENST00000331239 LOC107984640A0A0U1RRK4 108 aa6.32□□□□□ -1.4
C11orf54-201ENST00000331239 A0A1B0GX51 115 aa6.32□□□□□ -1.4
C11orf54-201ENST00000331239 IGKV2D-28P01615 120 aa6.32□□□□□ -1.4
C11orf54-201ENST00000331239 C6orf226Q5I0X4 101 aa6.32□□□□□ -1.4
C11orf54-201ENST00000331239 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
C11orf54-201ENST00000331239 J3KT08 172 aa6.31□□□□□ -1.4
C11orf54-201ENST00000331239 C6orf223Q8N319 242 aa6.31□□□□□ -1.4
C11orf54-201ENST00000331239 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
C11orf54-201ENST00000331239 CXCL5P42830 114 aa6.31□□□□□ -1.4
C11orf54-201ENST00000331239 XCL1P47992 114 aa6.31□□□□□ -1.4
C11orf54-201ENST00000331239 NDUFV3P56181 108 aaKnown RBP6.31□□□□□ -1.4
C11orf54-201ENST00000331239 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
C11orf54-201ENST00000331239 IGKV2D-24A0A075B6R9 120 aa6.3□□□□□ -1.4
C11orf54-201ENST00000331239 PFN2P35080 140 aa6.3□□□□□ -1.4
C11orf54-201ENST00000331239 Q6Q795 121 aa6.3□□□□□ -1.4
C11orf54-201ENST00000331239 MALP21145 153 aa6.3□□□□□ -1.4
C11orf54-201ENST00000331239 C1orf134Q5TEV5 83 aa6.3□□□□□ -1.4
C11orf54-201ENST00000331239 KRTAP1-5Q9BYS1 174 aa6.3□□□□□ -1.4
C11orf54-201ENST00000331239 BAALC-AS2P0C853 105 aa6.29□□□□□ -1.4
C11orf54-201ENST00000331239 CLPSL2Q6UWE3 100 aa6.29□□□□□ -1.4
C11orf54-201ENST00000331239 Q6ZRN7 208 aaPredicted RBP6.29□□□□□ -1.4
C11orf54-201ENST00000331239 Q8IZM0 81 aa6.29□□□□□ -1.4
C11orf54-201ENST00000331239 C2orf48Q96LS8 159 aa6.29□□□□□ -1.4
C11orf54-201ENST00000331239 PRO0628Q9UI54 55 aa6.29□□□□□ -1.4
C11orf54-201ENST00000331239 DNAH1Q9P2D7 4330 aa6.29□□□□□ -1.4
C11orf54-201ENST00000331239 GVQW2A0A096LPI5 108 aaPredicted RBP6.29□□□□□ -1.4
C11orf54-201ENST00000331239 SMIM11BQ8TCY0 68 aa6.29□□□□□ -1.4
C11orf54-201ENST00000331239 ACYP1P07311 99 aa6.28□□□□□ -1.4
C11orf54-201ENST00000331239 PKIGQ9Y2B9 76 aa6.28□□□□□ -1.4
C11orf54-201ENST00000331239 KMT2CQ8NEZ4 4911 aaKnown RBP6.27□□□□□ -1.41
C11orf54-201ENST00000331239 PSCAO43653 123 aa6.27□□□□□ -1.41
C11orf54-201ENST00000331239 DNAL4O96015 105 aa6.27□□□□□ -1.41
C11orf54-201ENST00000331239 Q9HAA7 133 aa6.27□□□□□ -1.41
C11orf54-201ENST00000331239 IGLV10-54A0A075B6I4 117 aa6.27□□□□□ -1.41
C11orf54-201ENST00000331239 INAFM2P0DMQ5 153 aa6.27□□□□□ -1.41
C11orf54-201ENST00000331239 C22orf24Q9Y442 160 aa6.27□□□□□ -1.41
C11orf54-201ENST00000331239 H0YGX0 51 aa6.26□□□□□ -1.41
C11orf54-201ENST00000331239 LINC00336Q6ZUF6 198 aa6.26□□□□□ -1.41
C11orf54-201ENST00000331239 A0A087WYN8 130 aa6.26□□□□□ -1.41
C11orf54-201ENST00000331239 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
C11orf54-201ENST00000331239 TRBV7-7A0A0K0K1E9 115 aa6.25□□□□□ -1.41
C11orf54-201ENST00000331239 KIAA0087Q14695 138 aa6.25□□□□□ -1.41
C11orf54-201ENST00000331239 LRCOL1A6NCL2 159 aa6.24□□□□□ -1.41
C11orf54-201ENST00000331239 C15orf56Q8N910 161 aa6.24□□□□□ -1.41
C11orf54-201ENST00000331239 LYSTQ99698 3801 aa6.24□□□□□ -1.41
C11orf54-201ENST00000331239 USP17L23D6RBM5 183 aa6.24□□□□□ -1.41
C11orf54-201ENST00000331239 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
C11orf54-201ENST00000331239 COX17Q14061 63 aa6.24□□□□□ -1.41
C11orf54-201ENST00000331239 LECT2O14960 151 aa6.23□□□□□ -1.41
C11orf54-201ENST00000331239 SPAG11BQ08648 103 aa6.23□□□□□ -1.41
C11orf54-201ENST00000331239 M0R2N4 97 aa6.22□□□□□ -1.41
C11orf54-201ENST00000331239 LINC00643Q86TS7 51 aa6.22□□□□□ -1.41
C11orf54-201ENST00000331239 SMCR5Q8TEV8 140 aa6.22□□□□□ -1.41
C11orf54-201ENST00000331239 GAGE2AQ6NT46 116 aa6.22□□□□□ -1.41
C11orf54-201ENST00000331239 A0A087WTM6 91 aa6.21□□□□□ -1.42
C11orf54-201ENST00000331239 NDUFC2O95298 119 aa6.21□□□□□ -1.42
C11orf54-201ENST00000331239 SDIM1Q6ZPB5 146 aa6.21□□□□□ -1.42
C11orf54-201ENST00000331239 IMUPQ9GZP8 106 aa6.21□□□□□ -1.42
C11orf54-201ENST00000331239 HRCT1Q6UXD1 115 aa6.21□□□□□ -1.42
C11orf54-201ENST00000331239 TLX1NBP0CAT3 122 aa6.2□□□□□ -1.42
C11orf54-201ENST00000331239 Q8N814 137 aa6.2□□□□□ -1.42
C11orf54-201ENST00000331239 RTL8CO15255 209 aa6.2□□□□□ -1.42
C11orf54-201ENST00000331239 SYCNQ0VAF6 134 aa6.2□□□□□ -1.42
C11orf54-201ENST00000331239 Q5XG85 94 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms