RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 C9orf66Q5T8R8 295 aa16.75■□□□□ 0.27
SOX1-201ENST00000330949 H3BQ85 93 aa16.73■□□□□ 0.27
SOX1-201ENST00000330949 HELZ2Q9BYK8 2649 aaKnown RBP16.72■□□□□ 0.27
SOX1-201ENST00000330949 C16orf74Q96GX8 76 aa16.71■□□□□ 0.27
SOX1-201ENST00000330949 C1orf195Q5TG92 126 aa16.7■□□□□ 0.26
SOX1-201ENST00000330949 NBEAL2Q6ZNJ1 2754 aa16.7■□□□□ 0.26
SOX1-201ENST00000330949 NREPQ16612 68 aa16.69■□□□□ 0.26
SOX1-201ENST00000330949 TMEM254Q8TBM7 123 aa16.69■□□□□ 0.26
SOX1-201ENST00000330949 C4orf3Q8WVX3 66 aa16.69■□□□□ 0.26
SOX1-201ENST00000330949 ERC2-IT1O76042 136 aa16.69■□□□□ 0.26
SOX1-201ENST00000330949 ZNF843Q8N446 348 aa16.69■□□□□ 0.26
SOX1-201ENST00000330949 V9GYY9 64 aa16.68■□□□□ 0.26
SOX1-201ENST00000330949 PLAC8L1A1L4L8 177 aa16.67■□□□□ 0.26
SOX1-201ENST00000330949 FSHBP01225 129 aa16.66■□□□□ 0.26
SOX1-201ENST00000330949 MUC7Q8TAX7 377 aa16.66■□□□□ 0.26
SOX1-201ENST00000330949 TENM4Q6N022 2769 aa16.66■□□□□ 0.26
SOX1-201ENST00000330949 A0A0U1RQV1 116 aa16.65■□□□□ 0.26
SOX1-201ENST00000330949 KMT2BQ9UMN6 2715 aaPredicted RBP16.65■□□□□ 0.26
SOX1-201ENST00000330949 Q6ZQY7 126 aa16.65■□□□□ 0.26
SOX1-201ENST00000330949 WFDC10AQ9H1F0 79 aa16.64■□□□□ 0.25
SOX1-201ENST00000330949 BPY2O14599 106 aa16.63■□□□□ 0.25
SOX1-201ENST00000330949 GCN1Q92616 2671 aaKnown RBP16.63■□□□□ 0.25
SOX1-201ENST00000330949 IGHV4-28A0A0C4DH34 117 aa16.63■□□□□ 0.25
SOX1-201ENST00000330949 A0A1B0GUV1 79 aa16.63■□□□□ 0.25
SOX1-201ENST00000330949 SPATA3Q8NHX4 192 aa16.63■□□□□ 0.25
SOX1-201ENST00000330949 KIAA0087Q14695 138 aa16.62■□□□□ 0.25
SOX1-201ENST00000330949 SCXQ7RTU7 201 aa16.62■□□□□ 0.25
SOX1-201ENST00000330949 PLA2G2AP14555 144 aa16.61■□□□□ 0.25
SOX1-201ENST00000330949 Q8NDZ9 215 aa16.61■□□□□ 0.25
SOX1-201ENST00000330949 ITPR2Q14571 2701 aa16.61■□□□□ 0.25
SOX1-201ENST00000330949 DEFB113Q30KQ7 82 aa16.6■□□□□ 0.25
SOX1-201ENST00000330949 MPLKIPQ8TAP9 179 aa16.6■□□□□ 0.25
SOX1-201ENST00000330949 FAM229BQ4G0N7 80 aa16.59■□□□□ 0.25
SOX1-201ENST00000330949 CLPSL2Q6UWE3 100 aa16.59■□□□□ 0.25
SOX1-201ENST00000330949 SEC61GP60059 68 aa16.58■□□□□ 0.25
SOX1-201ENST00000330949 C9orf116Q5BN46 136 aaPredicted RBP16.58■□□□□ 0.24
SOX1-201ENST00000330949 ESRGQ1W209 222 aa16.56■□□□□ 0.24
SOX1-201ENST00000330949 GIG44P09565 113 aaPredicted RBP16.56■□□□□ 0.24
SOX1-201ENST00000330949 PRYO14603 147 aa16.55■□□□□ 0.24
SOX1-201ENST00000330949 CD164L2Q6UWJ8 174 aa16.55■□□□□ 0.24
SOX1-201ENST00000330949 IGLV6-57P01721 117 aa16.55■□□□□ 0.24
SOX1-201ENST00000330949 NOTCH2Q04721 2471 aa16.54■□□□□ 0.24
SOX1-201ENST00000330949 LINC00269Q8N2A0 174 aa16.54■□□□□ 0.24
SOX1-201ENST00000330949 CCL24O00175 119 aa16.53■□□□□ 0.24
SOX1-201ENST00000330949 FUSP35637 526 aaKnown RBP eCLIP16.53■□□□□ 0.24
SOX1-201ENST00000330949 HECTD1Q9ULT8 2610 aa16.53■□□□□ 0.24
SOX1-201ENST00000330949 DNAJC9-AS1A6NH13 148 aa16.52■□□□□ 0.24
SOX1-201ENST00000330949 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.51■□□□□ 0.23
SOX1-201ENST00000330949 ESM1Q9NQ30 184 aa16.51■□□□□ 0.23
SOX1-201ENST00000330949 KRTAP1-3Q8IUG1 177 aa16.51■□□□□ 0.23
SOX1-201ENST00000330949 FLNBO75369 2602 aaKnown RBP16.5■□□□□ 0.23
SOX1-201ENST00000330949 HIVEP2P31629 2446 aa16.49■□□□□ 0.23
SOX1-201ENST00000330949 OCR1Q9BZK8 76 aa16.48■□□□□ 0.23
SOX1-201ENST00000330949 GYPEP15421 78 aa16.47■□□□□ 0.23
SOX1-201ENST00000330949 CHCHD10Q8WYQ3 142 aaPredicted RBP16.47■□□□□ 0.23
SOX1-201ENST00000330949 CMC4P56277 68 aaPredicted RBP16.47■□□□□ 0.23
SOX1-201ENST00000330949 DIRC1Q969H9 104 aa16.47■□□□□ 0.23
SOX1-201ENST00000330949 COX7BP24311 80 aa16.46■□□□□ 0.23
SOX1-201ENST00000330949 Q6ZTC4 211 aa16.46■□□□□ 0.23
SOX1-201ENST00000330949 PDZD2O15018 2839 aa16.44■□□□□ 0.22
SOX1-201ENST00000330949 CSNK1G2-AS1Q8NCQ2 148 aa16.44■□□□□ 0.22
SOX1-201ENST00000330949 ANK3Q12955 4377 aaKnown RBP16.44■□□□□ 0.22
SOX1-201ENST00000330949 IGKV4-1P06312 121 aa16.43■□□□□ 0.22
SOX1-201ENST00000330949 VWFP04275 2813 aa16.42■□□□□ 0.22
SOX1-201ENST00000330949 IGLV10-54A0A075B6I4 117 aa16.41■□□□□ 0.22
SOX1-201ENST00000330949 DEFB130BP0DP73 79 aa16.41■□□□□ 0.22
SOX1-201ENST00000330949 DEFB130AP0DP74 79 aa16.41■□□□□ 0.22
SOX1-201ENST00000330949 LINC01006Q8NI28 216 aa16.41■□□□□ 0.22
SOX1-201ENST00000330949 Q8N9L7 120 aa16.4■□□□□ 0.22
SOX1-201ENST00000330949 UNQ6190/PRO20217Q6UXQ8 127 aa16.39■□□□□ 0.21
SOX1-201ENST00000330949 C10orf25Q5T742 122 aa16.38■□□□□ 0.21
SOX1-201ENST00000330949 A0A0J9YWU9 116 aa16.37■□□□□ 0.21
SOX1-201ENST00000330949 ZNF73O43830 326 aaPredicted RBP16.37■□□□□ 0.21
SOX1-201ENST00000330949 IGHV4-30-4P0DP06 118 aa16.37■□□□□ 0.21
SOX1-201ENST00000330949 REG3AQ06141 175 aa16.37■□□□□ 0.21
SOX1-201ENST00000330949 HIGD2AQ9BW72 106 aa16.37■□□□□ 0.21
SOX1-201ENST00000330949 ANGP03950 147 aaKnown RBP16.36■□□□□ 0.21
SOX1-201ENST00000330949 SPAG11BQ08648 103 aa16.36■□□□□ 0.21
SOX1-201ENST00000330949 PRR15Q8IV56 129 aa16.36■□□□□ 0.21
SOX1-201ENST00000330949 ELOF1P60002 83 aaKnown RBP16.35■□□□□ 0.21
SOX1-201ENST00000330949 A0A096LPF7 62 aa16.34■□□□□ 0.21
SOX1-201ENST00000330949 PRO0255Q9UI72 69 aa16.33■□□□□ 0.2
SOX1-201ENST00000330949 CYSRT1A8MQ03 144 aa16.32■□□□□ 0.2
SOX1-201ENST00000330949 hDV103S1A0JD37 113 aa16.31■□□□□ 0.2
SOX1-201ENST00000330949 LINC00612Q8N6U2 182 aa16.31■□□□□ 0.2
SOX1-201ENST00000330949 DAD1P61803 113 aa16.3■□□□□ 0.2
SOX1-201ENST00000330949 C19orf73Q9NVV2 129 aa16.29■□□□□ 0.2
SOX1-201ENST00000330949 Q1T7F1 81 aa16.27■□□□□ 0.2
SOX1-201ENST00000330949 HIGD2BQ4VC39 106 aa16.27■□□□□ 0.2
SOX1-201ENST00000330949 PMAIP1Q13794 54 aa16.27■□□□□ 0.2
SOX1-201ENST00000330949 GVQW2A0A096LPI5 108 aaPredicted RBP16.26■□□□□ 0.19
SOX1-201ENST00000330949 Q6ZRU5 148 aa16.26■□□□□ 0.19
SOX1-201ENST00000330949 CELA1Q9UNI1 258 aa16.26■□□□□ 0.19
SOX1-201ENST00000330949 UNC79Q9P2D8 2635 aa16.25■□□□□ 0.19
SOX1-201ENST00000330949 SMR3AQ99954 134 aa16.23■□□□□ 0.19
SOX1-201ENST00000330949 XAGE1AQ9HD64 81 aa16.23■□□□□ 0.19
SOX1-201ENST00000330949 DEFB4AO15263 64 aa16.21■□□□□ 0.19
SOX1-201ENST00000330949 Q6ZRP5 223 aa16.21■□□□□ 0.19
SOX1-201ENST00000330949 LCE6AA0A183 80 aa16.2■□□□□ 0.18
SOX1-201ENST00000330949 IGLV1-51P01701 117 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms