RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 OBSCN-AS1Q96MR7 158 aa14.35□□□□□ -0.11
LIMS2-201ENST00000324938 C6orf48Q9UBA6 75 aa14.35□□□□□ -0.11
LIMS2-201ENST00000324938 ORMDL1Q9P0S3 153 aa14.35□□□□□ -0.11
LIMS2-201ENST00000324938 C11orf45Q8TAV5 145 aa14.33□□□□□ -0.11
LIMS2-201ENST00000324938 DEFB131BA0A096LNP1 70 aa14.33□□□□□ -0.12
LIMS2-201ENST00000324938 SLPIP03973 132 aa14.33□□□□□ -0.12
LIMS2-201ENST00000324938 S100A7L2Q5SY68 101 aa14.33□□□□□ -0.12
LIMS2-201ENST00000324938 C9orf129Q5T035 196 aaKnown RBP14.33□□□□□ -0.12
LIMS2-201ENST00000324938 SDIM1Q6ZPB5 146 aa14.32□□□□□ -0.12
LIMS2-201ENST00000324938 Q8N814 137 aa14.32□□□□□ -0.12
LIMS2-201ENST00000324938 C6orf99Q4VX62 202 aa14.3□□□□□ -0.12
LIMS2-201ENST00000324938 SMCR5Q8TEV8 140 aa14.3□□□□□ -0.12
LIMS2-201ENST00000324938 MAST4O15021 2626 aa14.3□□□□□ -0.12
LIMS2-201ENST00000324938 TRBV7-7A0A0K0K1E9 115 aa14.3□□□□□ -0.12
LIMS2-201ENST00000324938 GAGE2AQ6NT46 116 aa14.3□□□□□ -0.12
LIMS2-201ENST00000324938 ZNF561-AS1K7EIQ3 104 aa14.29□□□□□ -0.12
LIMS2-201ENST00000324938 LINC01556Q5JQF7 62 aa14.29□□□□□ -0.12
LIMS2-201ENST00000324938 C14orf132Q9NPU4 83 aa14.29□□□□□ -0.12
LIMS2-201ENST00000324938 IGLV6-57P01721 117 aa14.28□□□□□ -0.12
LIMS2-201ENST00000324938 HIGD2BQ4VC39 106 aa14.27□□□□□ -0.12
LIMS2-201ENST00000324938 LINC00643Q86TS7 51 aa14.27□□□□□ -0.12
LIMS2-201ENST00000324938 ANAPC13Q9BS18 74 aa14.27□□□□□ -0.12
LIMS2-201ENST00000324938 RPL18AQ02543 176 aaKnown RBP14.27□□□□□ -0.13
LIMS2-201ENST00000324938 C15orf56Q8N910 161 aa14.27□□□□□ -0.13
LIMS2-201ENST00000324938 CAMK2N2Q96S95 79 aa14.27□□□□□ -0.13
LIMS2-201ENST00000324938 NDUFV3P56181 108 aaKnown RBP14.26□□□□□ -0.13
LIMS2-201ENST00000324938 C1orf43Q9BWL3 253 aa14.25□□□□□ -0.13
LIMS2-201ENST00000324938 LINC00575Q6W349 94 aa14.24□□□□□ -0.13
LIMS2-201ENST00000324938 C2orf48Q96LS8 159 aa14.24□□□□□ -0.13
LIMS2-201ENST00000324938 XAGE1AQ9HD64 81 aa14.24□□□□□ -0.13
LIMS2-201ENST00000324938 TMEM256-PLSCR3K7ERE1 68 aa14.23□□□□□ -0.13
LIMS2-201ENST00000324938 IMUPQ9GZP8 106 aa14.23□□□□□ -0.13
LIMS2-201ENST00000324938 BAHCC1Q9P281 2608 aa14.22□□□□□ -0.13
LIMS2-201ENST00000324938 NHLRC4P0CG21 123 aaPredicted RBP14.21□□□□□ -0.13
LIMS2-201ENST00000324938 Q6ZRU5 148 aa14.21□□□□□ -0.13
LIMS2-201ENST00000324938 DNAH10OSP0CZ25 163 aa14.2□□□□□ -0.14
LIMS2-201ENST00000324938 IGKV2D-24A0A075B6R9 120 aa14.19□□□□□ -0.14
LIMS2-201ENST00000324938 TRBV10-3A0A0K0K1G6 114 aa14.19□□□□□ -0.14
LIMS2-201ENST00000324938 JMJD7-PLA2G4BH0Y9G9 81 aa14.19□□□□□ -0.14
LIMS2-201ENST00000324938 TRAV10A0A0B4J240 114 aa14.18□□□□□ -0.14
LIMS2-201ENST00000324938 F8WDY8 70 aa14.18□□□□□ -0.14
LIMS2-201ENST00000324938 TM2D3Q9BRN9 247 aa14.18□□□□□ -0.14
LIMS2-201ENST00000324938 NOTCH1P46531 2555 aa14.17□□□□□ -0.14
LIMS2-201ENST00000324938 TRAV23DV6A0A075B6W5 121 aa14.17□□□□□ -0.14
LIMS2-201ENST00000324938 hADV29S1A0JD25 119 aa14.17□□□□□ -0.14
LIMS2-201ENST00000324938 NDUFC2-KCTD14E9PQ53 114 aa14.17□□□□□ -0.14
LIMS2-201ENST00000324938 VPREB1P12018 145 aa14.17□□□□□ -0.14
LIMS2-201ENST00000324938 PRB2P02812 416 aaPredicted RBP14.15□□□□□ -0.14
LIMS2-201ENST00000324938 DIRC1Q969H9 104 aa14.15□□□□□ -0.14
LIMS2-201ENST00000324938 CCKP06307 115 aa14.14□□□□□ -0.15
LIMS2-201ENST00000324938 LINC00846Q9NV44 126 aa14.13□□□□□ -0.15
LIMS2-201ENST00000324938 K7EIL1 84 aa14.12□□□□□ -0.15
LIMS2-201ENST00000324938 COL6A5A8TX70 2615 aa14.12□□□□□ -0.15
LIMS2-201ENST00000324938 ZNF73O43830 326 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-201ENST00000324938 LINC00588Q9Y4M8 146 aa14.11□□□□□ -0.15
LIMS2-201ENST00000324938 M0R378 163 aa14.11□□□□□ -0.15
LIMS2-201ENST00000324938 SYCNQ0VAF6 134 aa14.11□□□□□ -0.15
LIMS2-201ENST00000324938 TRBV7-6A0A0J9YX20 115 aa14.09□□□□□ -0.15
LIMS2-201ENST00000324938 Q6ZRP5 223 aa14.09□□□□□ -0.15
LIMS2-201ENST00000324938 FAM236AA0A1B0GUQ0 79 aa14.08□□□□□ -0.16
LIMS2-201ENST00000324938 FAM236BA0A1B0GV22 79 aa14.08□□□□□ -0.16
LIMS2-201ENST00000324938 NBEAL1Q6ZS30 2694 aa14.08□□□□□ -0.16
LIMS2-201ENST00000324938 H3BQ85 93 aa14.07□□□□□ -0.16
LIMS2-201ENST00000324938 COX7BP24311 80 aa14.07□□□□□ -0.16
LIMS2-201ENST00000324938 ELOF1P60002 83 aaKnown RBP14.07□□□□□ -0.16
LIMS2-201ENST00000324938 Q6JHZ5 121 aa14.07□□□□□ -0.16
LIMS2-201ENST00000324938 Q6ZQY7 126 aa14.07□□□□□ -0.16
LIMS2-201ENST00000324938 MRAPQ8TCY5 172 aa14.07□□□□□ -0.16
LIMS2-201ENST00000324938 HUWE1Q7Z6Z7 4374 aaKnown RBP14.05□□□□□ -0.16
LIMS2-201ENST00000324938 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-201ENST00000324938 RBM3P98179 157 aaKnown RBP14.02□□□□□ -0.16
LIMS2-201ENST00000324938 LAMTOR3Q9UHA4 124 aa14.02□□□□□ -0.17
LIMS2-201ENST00000324938 LOC110117498A0A087WWA1 95 aa14□□□□□ -0.17
LIMS2-201ENST00000324938 CCDC179H3BU77 68 aa14□□□□□ -0.17
LIMS2-201ENST00000324938 TLX1NBP0CAT3 122 aa14□□□□□ -0.17
LIMS2-201ENST00000324938 Q6ZQT0 140 aa14□□□□□ -0.17
LIMS2-201ENST00000324938 UPK3BQ9BT76 320 aa13.99□□□□□ -0.17
LIMS2-201ENST00000324938 IGKV3D-7A0A0C4DH55 119 aa13.99□□□□□ -0.17
LIMS2-201ENST00000324938 USP17L23D6RBM5 183 aa13.99□□□□□ -0.17
LIMS2-201ENST00000324938 RMI2Q96E14 147 aa13.99□□□□□ -0.17
LIMS2-201ENST00000324938 LINC00528Q8N1L1 170 aa13.98□□□□□ -0.17
LIMS2-201ENST00000324938 CASC10Q5T4H9 136 aa13.97□□□□□ -0.17
LIMS2-201ENST00000324938 DNAH1Q9P2D7 4330 aa13.97□□□□□ -0.17
LIMS2-201ENST00000324938 GHRHP01286 108 aa13.97□□□□□ -0.17
LIMS2-201ENST00000324938 HIST1H4AP62805 103 aaKnown RBP13.96□□□□□ -0.18
LIMS2-201ENST00000324938 SERTAD4-AS1Q5TG53 156 aa13.95□□□□□ -0.18
LIMS2-201ENST00000324938 NKAPP1Q8N9T2 125 aa13.95□□□□□ -0.18
LIMS2-201ENST00000324938 PLA2G2DQ9UNK4 145 aa13.94□□□□□ -0.18
LIMS2-201ENST00000324938 ATP5EP2Q5VTU8 51 aa13.93□□□□□ -0.18
LIMS2-201ENST00000324938 DSCR8Q96T75 97 aa13.93□□□□□ -0.18
LIMS2-201ENST00000324938 KCNQ1DNQ9H478 68 aa13.93□□□□□ -0.18
LIMS2-201ENST00000324938 B5MCH6 92 aa13.93□□□□□ -0.18
LIMS2-201ENST00000324938 PDE6GP18545 87 aa13.92□□□□□ -0.18
LIMS2-201ENST00000324938 C7orf33Q8WU49 177 aa13.92□□□□□ -0.18
LIMS2-201ENST00000324938 UBL5Q9BZL1 73 aa13.9□□□□□ -0.18
LIMS2-201ENST00000324938 IGLV5-37A0A075B6J1 123 aa13.88□□□□□ -0.19
LIMS2-201ENST00000324938 MGAM2Q2M2H8 2515 aa13.88□□□□□ -0.19
LIMS2-201ENST00000324938 TRBV7-4A0A0J9YYF1 115 aa13.87□□□□□ -0.19
LIMS2-201ENST00000324938 M0R2N4 97 aa13.87□□□□□ -0.19
LIMS2-201ENST00000324938 ATOX1O00244 68 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms