RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 KALRNO60229 2985 aa11.66□□□□□ -0.54
PACS1-201ENST00000320580 PRO0255Q9UI72 69 aa11.66□□□□□ -0.54
PACS1-201ENST00000320580 CFAP46Q8IYW2 2715 aa11.65□□□□□ -0.54
PACS1-201ENST00000320580 ETDCA0A1B0GVM5 59 aa11.65□□□□□ -0.54
PACS1-201ENST00000320580 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.54
PACS1-201ENST00000320580 LINC00482Q8N8I6 264 aa11.65□□□□□ -0.54
PACS1-201ENST00000320580 FLNCQ14315 2725 aa11.65□□□□□ -0.54
PACS1-201ENST00000320580 ZNF73O43830 326 aaPredicted RBP11.65□□□□□ -0.54
PACS1-201ENST00000320580 UNQ6190/PRO20217Q6UXQ8 127 aa11.65□□□□□ -0.55
PACS1-201ENST00000320580 PLAC8L1A1L4L8 177 aa11.64□□□□□ -0.55
PACS1-201ENST00000320580 COX17Q14061 63 aa11.64□□□□□ -0.55
PACS1-201ENST00000320580 SPATA3Q8NHX4 192 aa11.64□□□□□ -0.55
PACS1-201ENST00000320580 DEFB4AO15263 64 aa11.64□□□□□ -0.55
PACS1-201ENST00000320580 UBE2BP63146 152 aa11.64□□□□□ -0.55
PACS1-201ENST00000320580 IL17DQ8TAD2 202 aa11.64□□□□□ -0.55
PACS1-201ENST00000320580 COL12A1Q99715 3063 aa11.63□□□□□ -0.55
PACS1-201ENST00000320580 HELZ2Q9BYK8 2649 aaKnown RBP11.61□□□□□ -0.55
PACS1-201ENST00000320580 LYRM9A8MSI8 78 aa11.6□□□□□ -0.55
PACS1-201ENST00000320580 WFDC13Q8IUB5 93 aa11.6□□□□□ -0.55
PACS1-201ENST00000320580 C4orf3Q8WVX3 66 aa11.6□□□□□ -0.55
PACS1-201ENST00000320580 CHD6Q8TD26 2715 aa11.6□□□□□ -0.55
PACS1-201ENST00000320580 DEFB113Q30KQ7 82 aa11.6□□□□□ -0.55
PACS1-201ENST00000320580 KRTAP10-9P60411 292 aa11.6□□□□□ -0.55
PACS1-201ENST00000320580 WFDC10BQ8IUB3 73 aa11.59□□□□□ -0.55
PACS1-201ENST00000320580 PRR15LQ9BU68 103 aa11.59□□□□□ -0.55
PACS1-201ENST00000320580 WFDC10AQ9H1F0 79 aa11.59□□□□□ -0.55
PACS1-201ENST00000320580 ODF3L2Q3SX64 289 aa11.58□□□□□ -0.55
PACS1-201ENST00000320580 CYSRT1A8MQ03 144 aa11.58□□□□□ -0.56
PACS1-201ENST00000320580 NDUFB1O75438 58 aa11.58□□□□□ -0.56
PACS1-201ENST00000320580 UBE2AP49459 152 aa11.58□□□□□ -0.56
PACS1-201ENST00000320580 KLK9Q2XQG4 91 aa11.58□□□□□ -0.56
PACS1-201ENST00000320580 LINC01006Q8NI28 216 aa11.57□□□□□ -0.56
PACS1-201ENST00000320580 IGKV2D-24A0A075B6R9 120 aa11.56□□□□□ -0.56
PACS1-201ENST00000320580 AVPP01185 164 aa11.56□□□□□ -0.56
PACS1-201ENST00000320580 LOC110117498A0A087WWA1 95 aa11.55□□□□□ -0.56
PACS1-201ENST00000320580 C6orf223Q8N319 242 aa11.55□□□□□ -0.56
PACS1-201ENST00000320580 FAM104AQ969W3 186 aa11.54□□□□□ -0.56
PACS1-201ENST00000320580 FP248Q71RG6 208 aaPredicted RBP11.54□□□□□ -0.56
PACS1-201ENST00000320580 SMIM29Q86T20 159 aa11.54□□□□□ -0.56
PACS1-201ENST00000320580 LINC00208Q96KT6 92 aa11.53□□□□□ -0.56
PACS1-201ENST00000320580 PLA2G2AP14555 144 aa11.53□□□□□ -0.56
PACS1-201ENST00000320580 OBSCN-AS1Q96MR7 158 aa11.53□□□□□ -0.56
PACS1-201ENST00000320580 LYPD5Q6UWN5 251 aa11.52□□□□□ -0.57
PACS1-201ENST00000320580 A0A0J9YWU9 116 aa11.51□□□□□ -0.57
PACS1-201ENST00000320580 NDUFS5O43920 106 aa11.51□□□□□ -0.57
PACS1-201ENST00000320580 ZNF702PQ9H963 129 aa11.51□□□□□ -0.57
PACS1-201ENST00000320580 LRBAP50851 2863 aa11.51□□□□□ -0.57
PACS1-201ENST00000320580 C22orf24Q9Y442 160 aa11.5□□□□□ -0.57
PACS1-201ENST00000320580 M0R378 163 aa11.49□□□□□ -0.57
PACS1-201ENST00000320580 M0R2N4 97 aa11.48□□□□□ -0.57
PACS1-201ENST00000320580 DEFB135Q30KP9 77 aa11.48□□□□□ -0.57
PACS1-201ENST00000320580 CDK2AP2O75956 126 aa11.48□□□□□ -0.57
PACS1-201ENST00000320580 LY6G6DO95868 133 aa11.48□□□□□ -0.57
PACS1-201ENST00000320580 RELNP78509 3460 aa11.47□□□□□ -0.57
PACS1-201ENST00000320580 A8MUN3 132 aa11.46□□□□□ -0.58
PACS1-201ENST00000320580 Q6YL49 198 aa11.44□□□□□ -0.58
PACS1-201ENST00000320580 F8P00451 2351 aa11.44□□□□□ -0.58
PACS1-201ENST00000320580 H0Y9J4 135 aa11.44□□□□□ -0.58
PACS1-201ENST00000320580 DEFB116Q30KQ4 102 aa11.44□□□□□ -0.58
PACS1-201ENST00000320580 C1orf137Q5JT78 98 aa11.44□□□□□ -0.58
PACS1-201ENST00000320580 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
PACS1-201ENST00000320580 ERC2-IT1O76042 136 aa11.42□□□□□ -0.58
PACS1-201ENST00000320580 FLNAP21333 2647 aaKnown RBP11.42□□□□□ -0.58
PACS1-201ENST00000320580 A0A1B0GUV1 79 aa11.42□□□□□ -0.58
PACS1-201ENST00000320580 ITPR3Q14573 2671 aa11.42□□□□□ -0.58
PACS1-201ENST00000320580 SPART-AS1P0CW21 52 aa11.41□□□□□ -0.58
PACS1-201ENST00000320580 CD164Q04900 197 aa11.41□□□□□ -0.58
PACS1-201ENST00000320580 ZFHX4Q86UP3 3567 aa11.41□□□□□ -0.58
PACS1-201ENST00000320580 APOC4P55056 127 aa11.41□□□□□ -0.58
PACS1-201ENST00000320580 C10orf25Q5T742 122 aa11.4□□□□□ -0.58
PACS1-201ENST00000320580 C1orf64Q8NEQ6 169 aa11.4□□□□□ -0.58
PACS1-201ENST00000320580 B9D2Q9BPU9 175 aa11.4□□□□□ -0.58
PACS1-201ENST00000320580 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
PACS1-201ENST00000320580 ITPR1Q14643 2758 aa11.39□□□□□ -0.59
PACS1-201ENST00000320580 FAM229BQ4G0N7 80 aa11.38□□□□□ -0.59
PACS1-201ENST00000320580 TRBV7-4A0A0J9YYF1 115 aa11.38□□□□□ -0.59
PACS1-201ENST00000320580 RPL37AP8A6NKH3 93 aa11.38□□□□□ -0.59
PACS1-201ENST00000320580 TACC2O95359 2948 aa11.38□□□□□ -0.59
PACS1-201ENST00000320580 KPRPQ5T749 579 aaPredicted RBP11.37□□□□□ -0.59
PACS1-201ENST00000320580 LINC00167Q96N53 147 aa11.36□□□□□ -0.59
PACS1-201ENST00000320580 LIMD2Q9BT23 127 aa11.36□□□□□ -0.59
PACS1-201ENST00000320580 TRAV22A0A0B4J277 110 aa11.35□□□□□ -0.59
PACS1-201ENST00000320580 A0A096LNI7 61 aa11.35□□□□□ -0.59
PACS1-201ENST00000320580 DHRS4-AS1Q9P1J3 65 aa11.34□□□□□ -0.59
PACS1-201ENST00000320580 HCG22E2RYF7 251 aa11.34□□□□□ -0.59
PACS1-201ENST00000320580 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
PACS1-201ENST00000320580 IGKV4-1P06312 121 aa11.32□□□□□ -0.6
PACS1-201ENST00000320580 KIAA0087Q14695 138 aa11.32□□□□□ -0.6
PACS1-201ENST00000320580 PRR15Q8IV56 129 aa11.32□□□□□ -0.6
PACS1-201ENST00000320580 SMR3AQ99954 134 aa11.31□□□□□ -0.6
PACS1-201ENST00000320580 C9orf66Q5T8R8 295 aa11.31□□□□□ -0.6
PACS1-201ENST00000320580 H0Y9P7 68 aa11.31□□□□□ -0.6
PACS1-201ENST00000320580 A0A096LNT2 108 aa11.3□□□□□ -0.6
PACS1-201ENST00000320580 LELP1Q5T871 98 aa11.3□□□□□ -0.6
PACS1-201ENST00000320580 ELOF1P60002 83 aaKnown RBP11.3□□□□□ -0.6
PACS1-201ENST00000320580 EGFEM1PQ0D2K5 195 aa11.3□□□□□ -0.6
PACS1-201ENST00000320580 UTP20O75691 2785 aaKnown RBP11.29□□□□□ -0.6
PACS1-201ENST00000320580 hDV103S1A0JD37 113 aa11.29□□□□□ -0.6
PACS1-201ENST00000320580 PCOTHQ58A44 107 aa11.28□□□□□ -0.6
PACS1-201ENST00000320580 CRYBG3Q68DQ2 2970 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms