RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 LINC01006Q8NI28 216 aa15.2■□□□□ 0.02
GRAMD1A-201ENST00000317991 HRCT1Q6UXD1 115 aa15.2■□□□□ 0.02
GRAMD1A-201ENST00000317991 ANGP03950 147 aaKnown RBP15.19■□□□□ 0.02
GRAMD1A-201ENST00000317991 TRBV10-3A0A0K0K1G6 114 aa15.18■□□□□ 0.02
GRAMD1A-201ENST00000317991 HAMPP81172 84 aa15.18■□□□□ 0.02
GRAMD1A-201ENST00000317991 KRTAP1-3Q8IUG1 177 aa15.18■□□□□ 0.02
GRAMD1A-201ENST00000317991 UNQ6190/PRO20217Q6UXQ8 127 aa15.17■□□□□ 0.02
GRAMD1A-201ENST00000317991 PRO0255Q9UI72 69 aa15.17■□□□□ 0.02
GRAMD1A-201ENST00000317991 IGHV4-28A0A0C4DH34 117 aa15.16■□□□□ 0.02
GRAMD1A-201ENST00000317991 LINC01547P58512 204 aaPredicted RBP15.16■□□□□ 0.02
GRAMD1A-201ENST00000317991 TRAV10A0A0B4J240 114 aa15.16■□□□□ 0.02
GRAMD1A-201ENST00000317991 REG3AQ06141 175 aa15.16■□□□□ 0.02
GRAMD1A-201ENST00000317991 LINC00612Q8N6U2 182 aa15.16■□□□□ 0.02
GRAMD1A-201ENST00000317991 ZNF561-AS1K7EIQ3 104 aa15.15■□□□□ 0.02
GRAMD1A-201ENST00000317991 DEFB4AO15263 64 aa15.15■□□□□ 0.02
GRAMD1A-201ENST00000317991 VWFP04275 2813 aa15.14■□□□□ 0.01
GRAMD1A-201ENST00000317991 Q6ZQY7 126 aa15.13■□□□□ 0.01
GRAMD1A-201ENST00000317991 Q6ZVQ6 151 aa15.13■□□□□ 0.01
GRAMD1A-201ENST00000317991 WFDC11Q8NEX6 87 aa15.13■□□□□ 0.01
GRAMD1A-201ENST00000317991 X6R8D5 127 aa15.12■□□□□ 0.01
GRAMD1A-201ENST00000317991 LOC110117498A0A087WWA1 95 aa15.11■□□□□ 0.01
GRAMD1A-201ENST00000317991 NDUFC2-KCTD14E9PQ53 114 aa15.11■□□□□ 0.01
GRAMD1A-201ENST00000317991 FAM236DA0A1B0GTK5 79 aa15.11■□□□□ 0.01
GRAMD1A-201ENST00000317991 H7BZZ5 65 aa15.11■□□□□ 0.01
GRAMD1A-201ENST00000317991 FAM236CP0DP71 79 aa15.11■□□□□ 0.01
GRAMD1A-201ENST00000317991 SNURFQ9Y675 71 aa15.11■□□□□ 0.01
GRAMD1A-201ENST00000317991 TRAV7A0A075B6U4 112 aa15.09■□□□□ 0.01
GRAMD1A-201ENST00000317991 ANK3Q12955 4377 aaKnown RBP15.08■□□□□ 0
GRAMD1A-201ENST00000317991 SCXQ7RTU7 201 aa15.08■□□□□ 0
GRAMD1A-201ENST00000317991 LINC00482Q8N8I6 264 aa15.08■□□□□ 0
GRAMD1A-201ENST00000317991 SPAG11BQ08648 103 aa15.07■□□□□ 0
GRAMD1A-201ENST00000317991 CYSRT1A8MQ03 144 aa15.07■□□□□ 0
GRAMD1A-201ENST00000317991 IGLV6-57P01721 117 aa15.06■□□□□ 0
GRAMD1A-201ENST00000317991 RMI2Q96E14 147 aa15.06■□□□□ 0
GRAMD1A-201ENST00000317991 HIVEP2P31629 2446 aa15.06■□□□□ 0
GRAMD1A-201ENST00000317991 XAGE1AQ9HD64 81 aa15.04■□□□□ -0
GRAMD1A-201ENST00000317991 MUC7Q8TAX7 377 aa15.02□□□□□ -0.01
GRAMD1A-201ENST00000317991 WIPF1O43516 503 aa15.01□□□□□ -0.01
GRAMD1A-201ENST00000317991 FLNBO75369 2602 aaKnown RBP14.99□□□□□ -0.01
GRAMD1A-201ENST00000317991 KLKP1Q107X0 134 aa14.99□□□□□ -0.01
GRAMD1A-201ENST00000317991 TM2D3Q9BRN9 247 aa14.99□□□□□ -0.01
GRAMD1A-201ENST00000317991 C16orf95Q9H693 158 aa14.99□□□□□ -0.01
GRAMD1A-201ENST00000317991 OTOGQ6ZRI0 2925 aa14.98□□□□□ -0.01
GRAMD1A-201ENST00000317991 A0A0J9YWU9 116 aa14.98□□□□□ -0.01
GRAMD1A-201ENST00000317991 IGHV4-30-4P0DP06 118 aa14.98□□□□□ -0.01
GRAMD1A-201ENST00000317991 DEFB135Q30KP9 77 aa14.98□□□□□ -0.01
GRAMD1A-201ENST00000317991 C9orf66Q5T8R8 295 aa14.98□□□□□ -0.01
GRAMD1A-201ENST00000317991 F8WEM9 126 aa14.97□□□□□ -0.01
GRAMD1A-201ENST00000317991 KLK12Q9UKR0 248 aa14.97□□□□□ -0.01
GRAMD1A-201ENST00000317991 BCE1O60756 84 aa14.97□□□□□ -0.01
GRAMD1A-201ENST00000317991 CXCL6P80162 114 aa14.97□□□□□ -0.01
GRAMD1A-201ENST00000317991 SERP1Q9Y6X1 66 aa14.97□□□□□ -0.01
GRAMD1A-201ENST00000317991 EPM2AB3EWF7 344 aa14.96□□□□□ -0.01
GRAMD1A-201ENST00000317991 DIRC1Q969H9 104 aa14.95□□□□□ -0.02
GRAMD1A-201ENST00000317991 C6orf48Q9UBA6 75 aa14.95□□□□□ -0.02
GRAMD1A-201ENST00000317991 HTN3P15516 51 aa14.94□□□□□ -0.02
GRAMD1A-201ENST00000317991 TRBV7-4A0A0J9YYF1 115 aa14.93□□□□□ -0.02
GRAMD1A-201ENST00000317991 PDE6GP18545 87 aa14.93□□□□□ -0.02
GRAMD1A-201ENST00000317991 CELA1Q9UNI1 258 aa14.93□□□□□ -0.02
GRAMD1A-201ENST00000317991 LYRM9A8MSI8 78 aa14.93□□□□□ -0.02
GRAMD1A-201ENST00000317991 ZNF73O43830 326 aaPredicted RBP14.93□□□□□ -0.02
GRAMD1A-201ENST00000317991 KRTAP10-3P60369 221 aa14.92□□□□□ -0.02
GRAMD1A-201ENST00000317991 DAD1P61803 113 aa14.92□□□□□ -0.02
GRAMD1A-201ENST00000317991 Q8N9L7 120 aa14.9□□□□□ -0.02
GRAMD1A-201ENST00000317991 COX7BP24311 80 aa14.9□□□□□ -0.02
GRAMD1A-201ENST00000317991 KRTAP1-1Q07627 177 aa14.89□□□□□ -0.03
GRAMD1A-201ENST00000317991 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.88□□□□□ -0.03
GRAMD1A-201ENST00000317991 SMR3AQ99954 134 aa14.88□□□□□ -0.03
GRAMD1A-201ENST00000317991 ELOF1P60002 83 aaKnown RBP14.86□□□□□ -0.03
GRAMD1A-201ENST00000317991 LINC00336Q6ZUF6 198 aa14.86□□□□□ -0.03
GRAMD1A-201ENST00000317991 FP248Q71RG6 208 aaPredicted RBP14.86□□□□□ -0.03
GRAMD1A-201ENST00000317991 PRR34Q9NV39 138 aa14.86□□□□□ -0.03
GRAMD1A-201ENST00000317991 HIGD2BQ4VC39 106 aa14.85□□□□□ -0.03
GRAMD1A-201ENST00000317991 LELP1Q5T871 98 aa14.84□□□□□ -0.03
GRAMD1A-201ENST00000317991 HIVEP1P15822 2718 aa14.84□□□□□ -0.03
GRAMD1A-201ENST00000317991 GVQW2A0A096LPI5 108 aaPredicted RBP14.84□□□□□ -0.03
GRAMD1A-201ENST00000317991 NREPQ16612 68 aa14.83□□□□□ -0.03
GRAMD1A-201ENST00000317991 LINC00474Q9P2X8 69 aa14.83□□□□□ -0.04
GRAMD1A-201ENST00000317991 H3BQ85 93 aa14.82□□□□□ -0.04
GRAMD1A-201ENST00000317991 BPY2O14599 106 aa14.82□□□□□ -0.04
GRAMD1A-201ENST00000317991 MIFP14174 115 aa14.82□□□□□ -0.04
GRAMD1A-201ENST00000317991 TENM1Q9UKZ4 2725 aa14.82□□□□□ -0.04
GRAMD1A-201ENST00000317991 VPREB1P12018 145 aa14.8□□□□□ -0.04
GRAMD1A-201ENST00000317991 TRRAPQ9Y4A5 3859 aa14.79□□□□□ -0.04
GRAMD1A-201ENST00000317991 TRBV7-6A0A0J9YX20 115 aa14.79□□□□□ -0.04
GRAMD1A-201ENST00000317991 PKD1L1Q8TDX9 2849 aa14.79□□□□□ -0.04
GRAMD1A-201ENST00000317991 TMEM254Q8TBM7 123 aa14.78□□□□□ -0.04
GRAMD1A-201ENST00000317991 SMIM26A0A096LP01 95 aa14.78□□□□□ -0.04
GRAMD1A-201ENST00000317991 Q8NAQ8 132 aa14.78□□□□□ -0.04
GRAMD1A-201ENST00000317991 CAMK2N2Q96S95 79 aa14.77□□□□□ -0.04
GRAMD1A-201ENST00000317991 LINC00528Q8N1L1 170 aa14.75□□□□□ -0.05
GRAMD1A-201ENST00000317991 IGKV4-1P06312 121 aa14.74□□□□□ -0.05
GRAMD1A-201ENST00000317991 C3orf84H3BNL1 204 aa14.74□□□□□ -0.05
GRAMD1A-201ENST00000317991 Q6ZRU5 148 aa14.74□□□□□ -0.05
GRAMD1A-201ENST00000317991 NDUFC1O43677 76 aa14.73□□□□□ -0.05
GRAMD1A-201ENST00000317991 M0R378 163 aa14.72□□□□□ -0.05
GRAMD1A-201ENST00000317991 SPART-AS1P0CW21 52 aa14.71□□□□□ -0.05
GRAMD1A-201ENST00000317991 NSD1Q96L73 2696 aaPredicted RBP14.71□□□□□ -0.05
GRAMD1A-201ENST00000317991 WFDC10BQ8IUB3 73 aa14.7□□□□□ -0.06
GRAMD1A-201ENST00000317991 MRAPQ8TCY5 172 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms