RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 TP73-AS1Q9UF72 201 aa10.31□□□□□ -0.76
EXOSC4-201ENST00000316052 C20orf202A1L168 122 aa10.3□□□□□ -0.76
EXOSC4-201ENST00000316052 PAPPA-AS1Q5QFB9 102 aa10.3□□□□□ -0.76
EXOSC4-201ENST00000316052 TIMM17AQ99595 171 aa10.3□□□□□ -0.76
EXOSC4-201ENST00000316052 BCE1O60756 84 aa10.29□□□□□ -0.76
EXOSC4-201ENST00000316052 ATP5LO75964 103 aa10.29□□□□□ -0.76
EXOSC4-201ENST00000316052 LINC00167Q96N53 147 aa10.29□□□□□ -0.76
EXOSC4-201ENST00000316052 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
EXOSC4-201ENST00000316052 SMIM1B2RUZ4 78 aa10.28□□□□□ -0.76
EXOSC4-201ENST00000316052 RPL28P46779 137 aaKnown RBP10.28□□□□□ -0.76
EXOSC4-201ENST00000316052 CXCL5P42830 114 aa10.27□□□□□ -0.77
EXOSC4-201ENST00000316052 ERASQ7Z444 233 aa10.27□□□□□ -0.77
EXOSC4-201ENST00000316052 IFI27L1Q96BM0 104 aa10.27□□□□□ -0.77
EXOSC4-201ENST00000316052 LINC01545Q5VT33 79 aa10.26□□□□□ -0.77
EXOSC4-201ENST00000316052 SCGB3A1Q96QR1 104 aa10.26□□□□□ -0.77
EXOSC4-201ENST00000316052 ANAPC11Q9NYG5 84 aa10.26□□□□□ -0.77
EXOSC4-201ENST00000316052 GAGE10A6NGK3 116 aa10.25□□□□□ -0.77
EXOSC4-201ENST00000316052 CRYGAP11844 174 aa10.25□□□□□ -0.77
EXOSC4-201ENST00000316052 COX7B2Q8TF08 81 aa10.25□□□□□ -0.77
EXOSC4-201ENST00000316052 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
EXOSC4-201ENST00000316052 TINCRA0A1B0GVN0 87 aa10.24□□□□□ -0.77
EXOSC4-201ENST00000316052 TYMSOSQ8TAI1 123 aa10.24□□□□□ -0.77
EXOSC4-201ENST00000316052 FAT4Q6V0I7 4981 aa10.23□□□□□ -0.77
EXOSC4-201ENST00000316052 SPINK8P0C7L1 97 aa10.22□□□□□ -0.77
EXOSC4-201ENST00000316052 KRTAP13-2Q52LG2 175 aa10.22□□□□□ -0.77
EXOSC4-201ENST00000316052 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
EXOSC4-201ENST00000316052 VAMP8Q9BV40 100 aa10.22□□□□□ -0.77
EXOSC4-201ENST00000316052 CST9LQ9H4G1 147 aa10.22□□□□□ -0.77
EXOSC4-201ENST00000316052 IGLV5-37A0A075B6J1 123 aa10.21□□□□□ -0.77
EXOSC4-201ENST00000316052 TSTD3H0UI37 97 aa10.21□□□□□ -0.77
EXOSC4-201ENST00000316052 TRAV12-1A0A0B4J245 112 aa10.2□□□□□ -0.78
EXOSC4-201ENST00000316052 UBE2AP49459 152 aa10.17□□□□□ -0.78
EXOSC4-201ENST00000316052 PMVKQ15126 192 aa10.17□□□□□ -0.78
EXOSC4-201ENST00000316052 NKAPP1Q8N9T2 125 aa10.17□□□□□ -0.78
EXOSC4-201ENST00000316052 MUC17Q685J3 4493 aa10.17□□□□□ -0.78
EXOSC4-201ENST00000316052 IGKV2-28A0A075B6P5 120 aa10.16□□□□□ -0.78
EXOSC4-201ENST00000316052 IGKV2D-28P01615 120 aa10.16□□□□□ -0.78
EXOSC4-201ENST00000316052 RETNLBQ9BQ08 111 aa10.16□□□□□ -0.78
EXOSC4-201ENST00000316052 HSBP1L1C9JCN9 74 aa10.15□□□□□ -0.78
EXOSC4-201ENST00000316052 SPATA45Q537H7 98 aa10.15□□□□□ -0.78
EXOSC4-201ENST00000316052 PAM16Q9Y3D7 125 aa10.15□□□□□ -0.78
EXOSC4-201ENST00000316052 H0Y8G0 127 aa10.14□□□□□ -0.79
EXOSC4-201ENST00000316052 PLNP26678 52 aa10.14□□□□□ -0.79
EXOSC4-201ENST00000316052 PFN2P35080 140 aa10.14□□□□□ -0.79
EXOSC4-201ENST00000316052 FAM229BQ4G0N7 80 aa10.14□□□□□ -0.79
EXOSC4-201ENST00000316052 A0A0U1RQV1 116 aa10.13□□□□□ -0.79
EXOSC4-201ENST00000316052 DPM2O94777 84 aa10.13□□□□□ -0.79
EXOSC4-201ENST00000316052 IGLV5-39A0A0G2JS06 123 aa10.12□□□□□ -0.79
EXOSC4-201ENST00000316052 PCP4L1A6NKN8 68 aa10.12□□□□□ -0.79
EXOSC4-201ENST00000316052 H3BRM9 83 aa10.12□□□□□ -0.79
EXOSC4-201ENST00000316052 IGKCP01834 107 aa10.12□□□□□ -0.79
EXOSC4-201ENST00000316052 PRLHP81277 87 aa10.12□□□□□ -0.79
EXOSC4-201ENST00000316052 ATOH7Q8N100 152 aa10.12□□□□□ -0.79
EXOSC4-201ENST00000316052 LINC00304Q8N9R0 145 aa10.12□□□□□ -0.79
EXOSC4-201ENST00000316052 PRO1933Q9H354 126 aa10.12□□□□□ -0.79
EXOSC4-201ENST00000316052 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
EXOSC4-201ENST00000316052 IGLC3P0DOY3 106 aa10.11□□□□□ -0.79
EXOSC4-201ENST00000316052 VPREB1P12018 145 aa10.11□□□□□ -0.79
EXOSC4-201ENST00000316052 DDTP30046 118 aa10.11□□□□□ -0.79
EXOSC4-201ENST00000316052 MIEN1Q9BRT3 115 aa10.11□□□□□ -0.79
EXOSC4-201ENST00000316052 SND1-IT1Q9HBX3 110 aa10.11□□□□□ -0.79
EXOSC4-201ENST00000316052 Q8NDZ9 215 aa10.1□□□□□ -0.79
EXOSC4-201ENST00000316052 PMCHL2Q9BQD1 86 aa10.1□□□□□ -0.79
EXOSC4-201ENST00000316052 UQCR10Q9UDW1 63 aa10.1□□□□□ -0.79
EXOSC4-201ENST00000316052 CHTOPQ9Y3Y2 248 aaKnown RBP10.1□□□□□ -0.79
EXOSC4-201ENST00000316052 LCE2AQ5TA79 106 aaPredicted RBP10.09□□□□□ -0.79
EXOSC4-201ENST00000316052 FAM19A1Q7Z5A9 133 aa10.09□□□□□ -0.79
EXOSC4-201ENST00000316052 TMEM126AQ9H061 195 aa10.09□□□□□ -0.79
EXOSC4-201ENST00000316052 IGKV2D-26A0A0A0MRZ7 120 aa10.08□□□□□ -0.8
EXOSC4-201ENST00000316052 ZNF22P17026 224 aaPredicted RBP10.08□□□□□ -0.8
EXOSC4-201ENST00000316052 KRTAP9-2Q9BYQ4 174 aa10.08□□□□□ -0.8
EXOSC4-201ENST00000316052 ERG28Q9UKR5 140 aa10.08□□□□□ -0.8
EXOSC4-201ENST00000316052 M0R378 163 aa10.07□□□□□ -0.8
EXOSC4-201ENST00000316052 PLEKHB2Q96CS7 222 aa10.07□□□□□ -0.8
EXOSC4-201ENST00000316052 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
EXOSC4-201ENST00000316052 DLEU1O43261 78 aa10.05□□□□□ -0.8
EXOSC4-201ENST00000316052 IGLV7-46A0A075B6I9 117 aa10.04□□□□□ -0.8
EXOSC4-201ENST00000316052 LINC00587B1AMM8 73 aa10.04□□□□□ -0.8
EXOSC4-201ENST00000316052 COX8AP10176 69 aa10.04□□□□□ -0.8
EXOSC4-201ENST00000316052 RPL24P83731 157 aaKnown RBP10.04□□□□□ -0.8
EXOSC4-201ENST00000316052 COX17Q14061 63 aa10.04□□□□□ -0.8
EXOSC4-201ENST00000316052 TPRXLQ17RH7 258 aa10.04□□□□□ -0.8
EXOSC4-201ENST00000316052 C3orf22Q8N5N4 141 aa10.04□□□□□ -0.8
EXOSC4-201ENST00000316052 C11orf86A6NJI1 115 aa10.03□□□□□ -0.8
EXOSC4-201ENST00000316052 ANKRD39Q53RE8 183 aa10.03□□□□□ -0.8
EXOSC4-201ENST00000316052 SLC25A34Q6PIV7 304 aa10.03□□□□□ -0.8
EXOSC4-201ENST00000316052 CDIP1Q9H305 208 aa10.03□□□□□ -0.8
EXOSC4-201ENST00000316052 TMEM170BQ5T4T1 132 aa10.01□□□□□ -0.81
EXOSC4-201ENST00000316052 BOD1L2Q8IYS8 172 aa10.01□□□□□ -0.81
EXOSC4-201ENST00000316052 C14orf144Q96I85 54 aa10.01□□□□□ -0.81
EXOSC4-201ENST00000316052 E9PLD3 99 aa10□□□□□ -0.81
EXOSC4-201ENST00000316052 HERVK_113P61574 105 aa10□□□□□ -0.81
EXOSC4-201ENST00000316052 CTAG1AP78358 180 aa10□□□□□ -0.81
EXOSC4-201ENST00000316052 HIGD2AQ9BW72 106 aa10□□□□□ -0.81
EXOSC4-201ENST00000316052 PPDPFQ9H3Y8 114 aa9.98□□□□□ -0.81
EXOSC4-201ENST00000316052 LINC00158P58513 81 aa9.97□□□□□ -0.81
EXOSC4-201ENST00000316052 SPRR4Q96PI1 79 aa9.97□□□□□ -0.81
EXOSC4-201ENST00000316052 A0A0U1RRA0 63 aa9.96□□□□□ -0.82
EXOSC4-201ENST00000316052 NMUP48645 174 aa9.96□□□□□ -0.82
EXOSC4-201ENST00000316052 TMEM223A0PJW6 202 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms