RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 XAGE1AQ9HD64 81 aa17.09■□□□□ 0.33
HOXB3-201ENST00000311626 LINC00167Q96N53 147 aa17.09■□□□□ 0.33
HOXB3-201ENST00000311626 LYPD5Q6UWN5 251 aa17.06■□□□□ 0.32
HOXB3-201ENST00000311626 CCKP06307 115 aa17.06■□□□□ 0.32
HOXB3-201ENST00000311626 HIGD2BQ4VC39 106 aa17.04■□□□□ 0.32
HOXB3-201ENST00000311626 WFDC9Q8NEX5 89 aa17.04■□□□□ 0.32
HOXB3-201ENST00000311626 PRR34Q9NV39 138 aa17.04■□□□□ 0.32
HOXB3-201ENST00000311626 OXLD1Q5BKU9 147 aa17.03■□□□□ 0.32
HOXB3-201ENST00000311626 WFDC10BQ8IUB3 73 aa17.03■□□□□ 0.32
HOXB3-201ENST00000311626 TMEM256-PLSCR3K7ERE1 68 aa17.03■□□□□ 0.32
HOXB3-201ENST00000311626 C6orf48Q9UBA6 75 aa17.03■□□□□ 0.32
HOXB3-201ENST00000311626 LINC00575Q6W349 94 aa17.02■□□□□ 0.32
HOXB3-201ENST00000311626 C9orf153Q5TBE3 101 aa17.02■□□□□ 0.32
HOXB3-201ENST00000311626 C3orf22Q8N5N4 141 aa17.01■□□□□ 0.31
HOXB3-201ENST00000311626 Q6JHZ5 121 aa17.01■□□□□ 0.31
HOXB3-201ENST00000311626 SMIM20Q8N5G0 67 aa17■□□□□ 0.31
HOXB3-201ENST00000311626 A0A0J9YWU9 116 aa16.99■□□□□ 0.31
HOXB3-201ENST00000311626 A0A1B0GX51 115 aa16.99■□□□□ 0.31
HOXB3-201ENST00000311626 HIST1H4AP62805 103 aaKnown RBP16.98■□□□□ 0.31
HOXB3-201ENST00000311626 TRBV10-3A0A0K0K1G6 114 aa16.98■□□□□ 0.31
HOXB3-201ENST00000311626 hADV29S1A0JD25 119 aa16.98■□□□□ 0.31
HOXB3-201ENST00000311626 JMJD7-PLA2G4BH0Y9G9 81 aa16.98■□□□□ 0.31
HOXB3-201ENST00000311626 TENM3Q9P273 2699 aa16.95■□□□□ 0.3
HOXB3-201ENST00000311626 M0R2N4 97 aa16.95■□□□□ 0.3
HOXB3-201ENST00000311626 C2orf48Q96LS8 159 aa16.95■□□□□ 0.3
HOXB3-201ENST00000311626 KPRPQ5T749 579 aaPredicted RBP16.95■□□□□ 0.3
HOXB3-201ENST00000311626 IGLV6-57P01721 117 aa16.94■□□□□ 0.3
HOXB3-201ENST00000311626 Q6ZTC4 211 aa16.94■□□□□ 0.3
HOXB3-201ENST00000311626 LAMTOR3Q9UHA4 124 aa16.94■□□□□ 0.3
HOXB3-201ENST00000311626 UQCRQO14949 82 aa16.94■□□□□ 0.3
HOXB3-201ENST00000311626 Q6ZQY7 126 aa16.93■□□□□ 0.3
HOXB3-201ENST00000311626 KRTAP10-11P60412 298 aa16.93■□□□□ 0.3
HOXB3-201ENST00000311626 ANK2Q01484 3957 aa16.93■□□□□ 0.3
HOXB3-201ENST00000311626 COX7CP15954 63 aa16.91■□□□□ 0.3
HOXB3-201ENST00000311626 FAM19A1Q7Z5A9 133 aa16.9■□□□□ 0.3
HOXB3-201ENST00000311626 CAMK2N2Q96S95 79 aa16.9■□□□□ 0.3
HOXB3-201ENST00000311626 ZNF561-AS1K7EIQ3 104 aa16.89■□□□□ 0.29
HOXB3-201ENST00000311626 CYSTM1Q9H1C7 97 aa16.89■□□□□ 0.29
HOXB3-201ENST00000311626 ATOX1O00244 68 aa16.89■□□□□ 0.29
HOXB3-201ENST00000311626 RBM3P98179 157 aaKnown RBP16.88■□□□□ 0.29
HOXB3-201ENST00000311626 TRAV23DV6A0A075B6W5 121 aa16.87■□□□□ 0.29
HOXB3-201ENST00000311626 USP17L23D6RBM5 183 aa16.86■□□□□ 0.29
HOXB3-201ENST00000311626 Q6ZRU5 148 aa16.86■□□□□ 0.29
HOXB3-201ENST00000311626 ESRGQ1W209 222 aa16.85■□□□□ 0.29
HOXB3-201ENST00000311626 GVQW2A0A096LPI5 108 aaPredicted RBP16.84■□□□□ 0.29
HOXB3-201ENST00000311626 Q6ZQT0 140 aa16.84■□□□□ 0.29
HOXB3-201ENST00000311626 STAB1Q9NY15 2570 aa16.84■□□□□ 0.29
HOXB3-201ENST00000311626 KRTAP26-1Q6PEX3 210 aa16.83■□□□□ 0.29
HOXB3-201ENST00000311626 DIRC1Q969H9 104 aa16.83■□□□□ 0.28
HOXB3-201ENST00000311626 F8P00451 2351 aa16.81■□□□□ 0.28
HOXB3-201ENST00000311626 ZNF73O43830 326 aaPredicted RBP16.81■□□□□ 0.28
HOXB3-201ENST00000311626 C15orf56Q8N910 161 aa16.81■□□□□ 0.28
HOXB3-201ENST00000311626 WIPF1O43516 503 aa16.81■□□□□ 0.28
HOXB3-201ENST00000311626 UBL5Q9BZL1 73 aa16.8■□□□□ 0.28
HOXB3-201ENST00000311626 VPREB1P12018 145 aa16.79■□□□□ 0.28
HOXB3-201ENST00000311626 MUC7Q8TAX7 377 aa16.79■□□□□ 0.28
HOXB3-201ENST00000311626 COX7BP24311 80 aa16.77■□□□□ 0.28
HOXB3-201ENST00000311626 FBN1P35555 2871 aaKnown RBP16.77■□□□□ 0.27
HOXB3-201ENST00000311626 IGKV2D-24A0A075B6R9 120 aa16.77■□□□□ 0.27
HOXB3-201ENST00000311626 FLNBO75369 2602 aaKnown RBP16.76■□□□□ 0.27
HOXB3-201ENST00000311626 DSCR8Q96T75 97 aa16.76■□□□□ 0.27
HOXB3-201ENST00000311626 SERP2Q8N6R1 65 aa16.75■□□□□ 0.27
HOXB3-201ENST00000311626 HAMPP81172 84 aa16.74■□□□□ 0.27
HOXB3-201ENST00000311626 CRYGAP11844 174 aa16.73■□□□□ 0.27
HOXB3-201ENST00000311626 NOTCH1P46531 2555 aa16.73■□□□□ 0.27
HOXB3-201ENST00000311626 MAST4O15021 2626 aa16.73■□□□□ 0.27
HOXB3-201ENST00000311626 Q6ZRP5 223 aa16.73■□□□□ 0.27
HOXB3-201ENST00000311626 UPK3BQ9BT76 320 aa16.73■□□□□ 0.27
HOXB3-201ENST00000311626 C1orf43Q9BWL3 253 aa16.72■□□□□ 0.27
HOXB3-201ENST00000311626 LOC110117498A0A087WWA1 95 aa16.72■□□□□ 0.27
HOXB3-201ENST00000311626 GHRHP01286 108 aa16.71■□□□□ 0.27
HOXB3-201ENST00000311626 EGFEM1PQ0D2K5 195 aa16.71■□□□□ 0.27
HOXB3-201ENST00000311626 DEFB131BA0A096LNP1 70 aa16.7■□□□□ 0.26
HOXB3-201ENST00000311626 ELOF1P60002 83 aaKnown RBP16.7■□□□□ 0.26
HOXB3-201ENST00000311626 NDUFC2-KCTD14E9PQ53 114 aa16.69■□□□□ 0.26
HOXB3-201ENST00000311626 CMYA5Q8N3K9 4069 aa16.69■□□□□ 0.26
HOXB3-201ENST00000311626 LOC107984640A0A0U1RRK4 108 aa16.69■□□□□ 0.26
HOXB3-201ENST00000311626 Q6ZVQ6 151 aa16.68■□□□□ 0.26
HOXB3-201ENST00000311626 SCXQ7RTU7 201 aa16.68■□□□□ 0.26
HOXB3-201ENST00000311626 M0R378 163 aa16.67■□□□□ 0.26
HOXB3-201ENST00000311626 H3BNG1 76 aa16.67■□□□□ 0.26
HOXB3-201ENST00000311626 ATP5EP2Q5VTU8 51 aa16.67■□□□□ 0.26
HOXB3-201ENST00000311626 LINC01547P58512 204 aaPredicted RBP16.66■□□□□ 0.26
HOXB3-201ENST00000311626 PRB2P02812 416 aaPredicted RBP16.66■□□□□ 0.26
HOXB3-201ENST00000311626 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.65■□□□□ 0.26
HOXB3-201ENST00000311626 C11orf45Q8TAV5 145 aa16.65■□□□□ 0.26
HOXB3-201ENST00000311626 KRTAP24-1Q3LI83 254 aa16.64■□□□□ 0.25
HOXB3-201ENST00000311626 SYCNQ0VAF6 134 aa16.61■□□□□ 0.25
HOXB3-201ENST00000311626 SERTAD4-AS1Q5TG53 156 aa16.61■□□□□ 0.25
HOXB3-201ENST00000311626 LINC00528Q8N1L1 170 aa16.6■□□□□ 0.25
HOXB3-201ENST00000311626 LINC01556Q5JQF7 62 aa16.6■□□□□ 0.25
HOXB3-201ENST00000311626 CASC10Q5T4H9 136 aa16.6■□□□□ 0.25
HOXB3-201ENST00000311626 DEFB105AQ8NG35 78 aa16.59■□□□□ 0.25
HOXB3-201ENST00000311626 TRBV7-4A0A0J9YYF1 115 aa16.58■□□□□ 0.25
HOXB3-201ENST00000311626 TRAV10A0A0B4J240 114 aa16.57■□□□□ 0.24
HOXB3-201ENST00000311626 FAM168BA1KXE4 195 aa16.54■□□□□ 0.24
HOXB3-201ENST00000311626 RPL37AP8A6NKH3 93 aa16.54■□□□□ 0.24
HOXB3-201ENST00000311626 TRBV7-6A0A0J9YX20 115 aa16.53■□□□□ 0.24
HOXB3-201ENST00000311626 C20orf197Q8N268 126 aa16.53■□□□□ 0.24
HOXB3-201ENST00000311626 NKAPP1Q8N9T2 125 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms