RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 CXCL6P80162 114 aa12.76□□□□□ -0.37
UBXN2A-201ENST00000309033 NHLRC4P0CG21 123 aaPredicted RBP12.76□□□□□ -0.37
UBXN2A-201ENST00000309033 CRYGAP11844 174 aa12.74□□□□□ -0.37
UBXN2A-201ENST00000309033 ZFYVE26Q68DK2 2539 aa12.73□□□□□ -0.37
UBXN2A-201ENST00000309033 PMAIP1Q13794 54 aa12.72□□□□□ -0.37
UBXN2A-201ENST00000309033 C1orf64Q8NEQ6 169 aa12.72□□□□□ -0.37
UBXN2A-201ENST00000309033 KRTAP24-1Q3LI83 254 aa12.72□□□□□ -0.37
UBXN2A-201ENST00000309033 SETD2Q9BYW2 2564 aaPredicted RBP12.72□□□□□ -0.37
UBXN2A-201ENST00000309033 MOBPQ13875 183 aa12.71□□□□□ -0.37
UBXN2A-201ENST00000309033 PHF5AQ7RTV0 110 aaKnown RBP12.7□□□□□ -0.38
UBXN2A-201ENST00000309033 ELOF1P60002 83 aaKnown RBP12.69□□□□□ -0.38
UBXN2A-201ENST00000309033 IGKV2D-30A0A075B6S6 120 aa12.69□□□□□ -0.38
UBXN2A-201ENST00000309033 IGKV2-30P06310 120 aa12.69□□□□□ -0.38
UBXN2A-201ENST00000309033 LIMD2Q9BT23 127 aa12.69□□□□□ -0.38
UBXN2A-201ENST00000309033 PRO0461Q9UI25 63 aa12.69□□□□□ -0.38
UBXN2A-201ENST00000309033 PCSK5Q92824 1860 aa12.68□□□□□ -0.38
UBXN2A-201ENST00000309033 SPACA4Q8TDM5 124 aa12.67□□□□□ -0.38
UBXN2A-201ENST00000309033 FSHBP01225 129 aa12.67□□□□□ -0.38
UBXN2A-201ENST00000309033 Q8NAQ8 132 aa12.66□□□□□ -0.38
UBXN2A-201ENST00000309033 CHTF8P0CG12 524 aa12.65□□□□□ -0.38
UBXN2A-201ENST00000309033 hDV103S1A0JD37 113 aa12.65□□□□□ -0.38
UBXN2A-201ENST00000309033 ST20-AS1Q8NBB2 130 aa12.65□□□□□ -0.38
UBXN2A-201ENST00000309033 H3BNG1 76 aa12.64□□□□□ -0.39
UBXN2A-201ENST00000309033 LINC00588Q9Y4M8 146 aa12.63□□□□□ -0.39
UBXN2A-201ENST00000309033 USP9YO00507 2555 aaPredicted RBP12.63□□□□□ -0.39
UBXN2A-201ENST00000309033 Q6ZQT0 140 aa12.62□□□□□ -0.39
UBXN2A-201ENST00000309033 Q6ZRX8 168 aa12.61□□□□□ -0.39
UBXN2A-201ENST00000309033 LINC00476Q8WZB0 136 aa12.61□□□□□ -0.39
UBXN2A-201ENST00000309033 ZNF462Q96JM2 2506 aa12.61□□□□□ -0.39
UBXN2A-201ENST00000309033 CHD8Q9HCK8 2581 aa12.6□□□□□ -0.39
UBXN2A-201ENST00000309033 EPM2AB3EWF7 344 aa12.59□□□□□ -0.39
UBXN2A-201ENST00000309033 C7orf65Q6ZTY9 151 aa12.59□□□□□ -0.39
UBXN2A-201ENST00000309033 RTL8CO15255 209 aa12.58□□□□□ -0.39
UBXN2A-201ENST00000309033 LITAFQ99732 161 aa12.58□□□□□ -0.4
UBXN2A-201ENST00000309033 RPL37AP61513 92 aaKnown RBP12.57□□□□□ -0.4
UBXN2A-201ENST00000309033 Q6ZRP5 223 aa12.56□□□□□ -0.4
UBXN2A-201ENST00000309033 FAM168BA1KXE4 195 aa12.56□□□□□ -0.4
UBXN2A-201ENST00000309033 NBDYA0A0U1RRE5 68 aa12.56□□□□□ -0.4
UBXN2A-201ENST00000309033 SPTBN4Q9H254 2564 aa12.54□□□□□ -0.4
UBXN2A-201ENST00000309033 C16orf90A8MZG2 172 aa12.54□□□□□ -0.4
UBXN2A-201ENST00000309033 KLK9Q2XQG4 91 aa12.54□□□□□ -0.4
UBXN2A-201ENST00000309033 LOC110117498A0A087WWA1 95 aa12.53□□□□□ -0.4
UBXN2A-201ENST00000309033 Q8NBF4 154 aa12.53□□□□□ -0.4
UBXN2A-201ENST00000309033 GVQW2A0A096LPI5 108 aaPredicted RBP12.52□□□□□ -0.4
UBXN2A-201ENST00000309033 MUC4Q99102 2169 aa12.52□□□□□ -0.41
UBXN2A-201ENST00000309033 PKD1L2Q7Z442 2459 aa12.51□□□□□ -0.41
UBXN2A-201ENST00000309033 POLQO75417 2590 aa12.5□□□□□ -0.41
UBXN2A-201ENST00000309033 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
UBXN2A-201ENST00000309033 TP53AIP1Q9HCN2 124 aa12.48□□□□□ -0.41
UBXN2A-201ENST00000309033 CSNK1G2-AS1Q8NCQ2 148 aa12.47□□□□□ -0.41
UBXN2A-201ENST00000309033 DNAH12Q6ZR08 3092 aa12.47□□□□□ -0.41
UBXN2A-201ENST00000309033 SERTAD4-AS1Q5TG53 156 aa12.47□□□□□ -0.41
UBXN2A-201ENST00000309033 VPREB1P12018 145 aa12.46□□□□□ -0.41
UBXN2A-201ENST00000309033 ANKRD17O75179 2603 aaKnown RBP12.46□□□□□ -0.41
UBXN2A-201ENST00000309033 MTORP42345 2549 aa12.46□□□□□ -0.42
UBXN2A-201ENST00000309033 A0A1B0GU69 56 aa12.45□□□□□ -0.42
UBXN2A-201ENST00000309033 IGLV6-57P01721 117 aa12.45□□□□□ -0.42
UBXN2A-201ENST00000309033 SPAG11AQ6PDA7 123 aa12.45□□□□□ -0.42
UBXN2A-201ENST00000309033 EIF4EBP3O60516 100 aaPredicted RBP12.44□□□□□ -0.42
UBXN2A-201ENST00000309033 DNAH10OSP0CZ25 163 aa12.43□□□□□ -0.42
UBXN2A-201ENST00000309033 LINC00313P59037 77 aa12.43□□□□□ -0.42
UBXN2A-201ENST00000309033 C4orf26Q17RF5 130 aa12.42□□□□□ -0.42
UBXN2A-201ENST00000309033 TYMSOSQ8TAI1 123 aa12.42□□□□□ -0.42
UBXN2A-201ENST00000309033 ACYP2P14621 99 aa12.42□□□□□ -0.42
UBXN2A-201ENST00000309033 KRTAP10-11P60412 298 aa12.42□□□□□ -0.42
UBXN2A-201ENST00000309033 BCE1O60756 84 aa12.42□□□□□ -0.42
UBXN2A-201ENST00000309033 A0A1B0GW54 56 aa12.42□□□□□ -0.42
UBXN2A-201ENST00000309033 UTRNP46939 3433 aa12.41□□□□□ -0.42
UBXN2A-201ENST00000309033 TRAV22A0A0B4J277 110 aa12.38□□□□□ -0.43
UBXN2A-201ENST00000309033 KRTAP10-3P60369 221 aa12.37□□□□□ -0.43
UBXN2A-201ENST00000309033 IGLV1-50A0A075B6I6 118 aa12.36□□□□□ -0.43
UBXN2A-201ENST00000309033 K7EQZ3 153 aa12.36□□□□□ -0.43
UBXN2A-201ENST00000309033 ACANP16112 2415 aa12.35□□□□□ -0.43
UBXN2A-201ENST00000309033 TRBV7-4A0A0J9YYF1 115 aa12.35□□□□□ -0.43
UBXN2A-201ENST00000309033 Q96NJ1 140 aa12.34□□□□□ -0.43
UBXN2A-201ENST00000309033 FAM229AH3BQW9 127 aa12.34□□□□□ -0.43
UBXN2A-201ENST00000309033 A0A096LNT2 108 aa12.33□□□□□ -0.44
UBXN2A-201ENST00000309033 GIG44P09565 113 aaPredicted RBP12.33□□□□□ -0.44
UBXN2A-201ENST00000309033 IGLV8-61A0A075B6I0 122 aa12.33□□□□□ -0.44
UBXN2A-201ENST00000309033 K7EIL1 84 aa12.31□□□□□ -0.44
UBXN2A-201ENST00000309033 C15orf56Q8N910 161 aa12.31□□□□□ -0.44
UBXN2A-201ENST00000309033 PRO0628Q9UI54 55 aa12.3□□□□□ -0.44
UBXN2A-201ENST00000309033 KCNQ1DNQ9H478 68 aa12.29□□□□□ -0.44
UBXN2A-201ENST00000309033 H3BPC8 53 aa12.29□□□□□ -0.44
UBXN2A-201ENST00000309033 A8MWP4 228 aa12.29□□□□□ -0.44
UBXN2A-201ENST00000309033 C19orf73Q9NVV2 129 aa12.28□□□□□ -0.44
UBXN2A-201ENST00000309033 A0A0G2JQZ4 141 aa12.28□□□□□ -0.44
UBXN2A-201ENST00000309033 A0A1W2PNN7 141 aa12.28□□□□□ -0.44
UBXN2A-201ENST00000309033 LINC00528Q8N1L1 170 aa12.28□□□□□ -0.44
UBXN2A-201ENST00000309033 C9orf129Q5T035 196 aaKnown RBP12.27□□□□□ -0.45
UBXN2A-201ENST00000309033 WWC2-AS2Q96NR7 200 aa12.26□□□□□ -0.45
UBXN2A-201ENST00000309033 IGFL1Q6UW32 110 aa12.25□□□□□ -0.45
UBXN2A-201ENST00000309033 PRR34Q9NV39 138 aa12.25□□□□□ -0.45
UBXN2A-201ENST00000309033 PLA2G1BP04054 148 aaKnown RBP12.25□□□□□ -0.45
UBXN2A-201ENST00000309033 RPS28P62857 69 aaKnown RBP12.24□□□□□ -0.45
UBXN2A-201ENST00000309033 MRPL34Q9BQ48 92 aaKnown RBP12.21□□□□□ -0.45
UBXN2A-201ENST00000309033 FASNP49327 2511 aaKnown RBP12.2□□□□□ -0.46
UBXN2A-201ENST00000309033 ATP11AUNQ6ZP68 121 aa12.2□□□□□ -0.46
UBXN2A-201ENST00000309033 DSCR10P59022 87 aa12.19□□□□□ -0.46
UBXN2A-201ENST00000309033 Q8N377 158 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms