RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 C22orf24Q9Y442 160 aa13.74□□□□□ -0.21
SNUPN-201ENST00000308588 LINC00587B1AMM8 73 aa13.73□□□□□ -0.21
SNUPN-201ENST00000308588 INAFM2P0DMQ5 153 aa13.71□□□□□ -0.21
SNUPN-201ENST00000308588 KRTAP11-1Q8IUC1 163 aa13.71□□□□□ -0.21
SNUPN-201ENST00000308588 PRR3P79522 188 aaKnown RBP13.7□□□□□ -0.22
SNUPN-201ENST00000308588 ANKRD39Q53RE8 183 aa13.7□□□□□ -0.22
SNUPN-201ENST00000308588 MIR7-3HGQ8N6C7 128 aa13.7□□□□□ -0.22
SNUPN-201ENST00000308588 TP73-AS1Q9UF72 201 aa13.69□□□□□ -0.22
SNUPN-201ENST00000308588 IGLV5-37A0A075B6J1 123 aa13.69□□□□□ -0.22
SNUPN-201ENST00000308588 TTTY13Q9BZ97 58 aa13.69□□□□□ -0.22
SNUPN-201ENST00000308588 A0A0J9YXY3 114 aa13.68□□□□□ -0.22
SNUPN-201ENST00000308588 HNRNPA3P51991 378 aaKnown RBP13.68□□□□□ -0.22
SNUPN-201ENST00000308588 Q8NDZ9 215 aa13.68□□□□□ -0.22
SNUPN-201ENST00000308588 PSORS1C2Q9UIG4 136 aa13.68□□□□□ -0.22
SNUPN-201ENST00000308588 VPREB1P12018 145 aa13.67□□□□□ -0.22
SNUPN-201ENST00000308588 MRPL55Q7Z7F7 128 aaKnown RBP13.67□□□□□ -0.22
SNUPN-201ENST00000308588 UBE2BP63146 152 aa13.65□□□□□ -0.22
SNUPN-201ENST00000308588 LBHQ53QV2 105 aaPredicted RBP13.65□□□□□ -0.22
SNUPN-201ENST00000308588 DAND5Q8N907 189 aa13.65□□□□□ -0.22
SNUPN-201ENST00000308588 TMA7Q9Y2S6 64 aaKnown RBP13.65□□□□□ -0.22
SNUPN-201ENST00000308588 ZNF815PA8K554 130 aa13.64□□□□□ -0.23
SNUPN-201ENST00000308588 SCGB1D1O95968 90 aa13.64□□□□□ -0.23
SNUPN-201ENST00000308588 RPL24P83731 157 aaKnown RBP13.64□□□□□ -0.23
SNUPN-201ENST00000308588 NKAPP1Q8N9T2 125 aa13.64□□□□□ -0.23
SNUPN-201ENST00000308588 LINC00167Q96N53 147 aa13.64□□□□□ -0.23
SNUPN-201ENST00000308588 ADAMTSL4-AS1Q5T5F5 129 aa13.63□□□□□ -0.23
SNUPN-201ENST00000308588 PKHD1L1Q86WI1 4243 aa13.62□□□□□ -0.23
SNUPN-201ENST00000308588 FLG2Q5D862 2391 aaPredicted RBP13.62□□□□□ -0.23
SNUPN-201ENST00000308588 LOC107984156A0A0G2JMH3 177 aa13.61□□□□□ -0.23
SNUPN-201ENST00000308588 GAGE10A6NGK3 116 aa13.61□□□□□ -0.23
SNUPN-201ENST00000308588 ARL17AQ8IVW1 177 aa13.61□□□□□ -0.23
SNUPN-201ENST00000308588 C1orf137Q5JT78 98 aa13.6□□□□□ -0.23
SNUPN-201ENST00000308588 PCP2Q8IVA1 136 aa13.6□□□□□ -0.23
SNUPN-201ENST00000308588 BOD1L2Q8IYS8 172 aa13.6□□□□□ -0.23
SNUPN-201ENST00000308588 LITAFQ99732 161 aa13.6□□□□□ -0.23
SNUPN-201ENST00000308588 RPL37AP8A6NKH3 93 aa13.59□□□□□ -0.23
SNUPN-201ENST00000308588 HSBP1L1C9JCN9 74 aa13.58□□□□□ -0.24
SNUPN-201ENST00000308588 TIMM17BO60830 172 aa13.58□□□□□ -0.24
SNUPN-201ENST00000308588 SRSF9Q13242 221 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNUPN-201ENST00000308588 EIF4EBP3O60516 100 aaPredicted RBP13.56□□□□□ -0.24
SNUPN-201ENST00000308588 MYCBP2O75592 4640 aa13.55□□□□□ -0.24
SNUPN-201ENST00000308588 SOSTDC1Q6X4U4 206 aa13.55□□□□□ -0.24
SNUPN-201ENST00000308588 IGLV7-43P04211 117 aa13.54□□□□□ -0.24
SNUPN-201ENST00000308588 IGLV1-50A0A075B6I6 118 aa13.54□□□□□ -0.24
SNUPN-201ENST00000308588 NPC2P61916 151 aa13.54□□□□□ -0.24
SNUPN-201ENST00000308588 JOSD1Q15040 202 aaPredicted RBP13.54□□□□□ -0.24
SNUPN-201ENST00000308588 SCGB1D4Q6XE38 83 aa13.54□□□□□ -0.24
SNUPN-201ENST00000308588 MIEN1Q9BRT3 115 aa13.54□□□□□ -0.24
SNUPN-201ENST00000308588 IGKV2-28A0A075B6P5 120 aa13.53□□□□□ -0.24
SNUPN-201ENST00000308588 M0R378 163 aa13.53□□□□□ -0.24
SNUPN-201ENST00000308588 IGKV2D-28P01615 120 aa13.53□□□□□ -0.24
SNUPN-201ENST00000308588 SPINK6Q6UWN8 80 aa13.52□□□□□ -0.25
SNUPN-201ENST00000308588 NCR3O14931 201 aa13.51□□□□□ -0.25
SNUPN-201ENST00000308588 LINC00308Q8TCZ7 52 aa13.5□□□□□ -0.25
SNUPN-201ENST00000308588 LRP1Q07954 4544 aaKnown RBP13.49□□□□□ -0.25
SNUPN-201ENST00000308588 NDUFC2O95298 119 aa13.49□□□□□ -0.25
SNUPN-201ENST00000308588 TMEM238C9JI98 176 aa13.48□□□□□ -0.25
SNUPN-201ENST00000308588 SPANXDQ9BXN6 97 aa13.48□□□□□ -0.25
SNUPN-201ENST00000308588 SPANXCQ9NY87 97 aa13.48□□□□□ -0.25
SNUPN-201ENST00000308588 BCE1O60756 84 aa13.47□□□□□ -0.25
SNUPN-201ENST00000308588 TRBV10-2A0A0K0K1G8 114 aa13.46□□□□□ -0.25
SNUPN-201ENST00000308588 SPANXB1Q9NS25 103 aaPredicted RBP13.46□□□□□ -0.25
SNUPN-201ENST00000308588 FAT3Q8TDW7 4589 aa13.46□□□□□ -0.26
SNUPN-201ENST00000308588 PYY3Q5JQD4 70 aa13.44□□□□□ -0.26
SNUPN-201ENST00000308588 TMEM126AQ9H061 195 aa13.44□□□□□ -0.26
SNUPN-201ENST00000308588 TRBV10-3A0A0K0K1G6 114 aa13.44□□□□□ -0.26
SNUPN-201ENST00000308588 ZNF861PO60384 105 aa13.44□□□□□ -0.26
SNUPN-201ENST00000308588 REG3GQ6UW15 175 aa13.44□□□□□ -0.26
SNUPN-201ENST00000308588 PAM16Q9Y3D7 125 aa13.44□□□□□ -0.26
SNUPN-201ENST00000308588 KRTAP29-1A8MX34 341 aaPredicted RBP13.43□□□□□ -0.26
SNUPN-201ENST00000308588 COX8AP10176 69 aa13.43□□□□□ -0.26
SNUPN-201ENST00000308588 Q6ZVH6 145 aa13.42□□□□□ -0.26
SNUPN-201ENST00000308588 VAMP8Q9BV40 100 aa13.42□□□□□ -0.26
SNUPN-201ENST00000308588 OXTP01178 125 aa13.41□□□□□ -0.26
SNUPN-201ENST00000308588 SPATA45Q537H7 98 aa13.41□□□□□ -0.26
SNUPN-201ENST00000308588 DIRC1Q969H9 104 aa13.41□□□□□ -0.26
SNUPN-201ENST00000308588 KRTAP13-1Q8IUC0 172 aa13.4□□□□□ -0.26
SNUPN-201ENST00000308588 KCNQ1DNQ9H478 68 aa13.4□□□□□ -0.26
SNUPN-201ENST00000308588 IFITM1P13164 125 aa13.39□□□□□ -0.27
SNUPN-201ENST00000308588 DDTP30046 118 aa13.39□□□□□ -0.27
SNUPN-201ENST00000308588 H0Y9J4 135 aa13.39□□□□□ -0.27
SNUPN-201ENST00000308588 IGLV6-57P01721 117 aa13.39□□□□□ -0.27
SNUPN-201ENST00000308588 RPL28P46779 137 aaKnown RBP13.39□□□□□ -0.27
SNUPN-201ENST00000308588 MUSTN1Q8IVN3 82 aa13.39□□□□□ -0.27
SNUPN-201ENST00000308588 PPDPFQ9H3Y8 114 aa13.39□□□□□ -0.27
SNUPN-201ENST00000308588 PRYO14603 147 aa13.38□□□□□ -0.27
SNUPN-201ENST00000308588 DLEU1O43261 78 aa13.38□□□□□ -0.27
SNUPN-201ENST00000308588 C14orf144Q96I85 54 aa13.38□□□□□ -0.27
SNUPN-201ENST00000308588 UBE2AP49459 152 aa13.37□□□□□ -0.27
SNUPN-201ENST00000308588 COPS9Q8WXC6 57 aa13.37□□□□□ -0.27
SNUPN-201ENST00000308588 SPRR1AP35321 89 aa13.36□□□□□ -0.27
SNUPN-201ENST00000308588 S100A7L2Q5SY68 101 aa13.36□□□□□ -0.27
SNUPN-201ENST00000308588 FAM19A1Q7Z5A9 133 aa13.36□□□□□ -0.27
SNUPN-201ENST00000308588 PRLHP81277 87 aa13.35□□□□□ -0.27
SNUPN-201ENST00000308588 KRTAP4-16G5E9R7 235 aaPredicted RBP13.34□□□□□ -0.27
SNUPN-201ENST00000308588 LINC01600Q96MT4 127 aa13.34□□□□□ -0.27
SNUPN-201ENST00000308588 LINC00518Q8N0U6 118 aa13.33□□□□□ -0.28
SNUPN-201ENST00000308588 J3QL48 77 aa13.32□□□□□ -0.28
SNUPN-201ENST00000308588 S100A12P80511 92 aa13.32□□□□□ -0.28
SNUPN-201ENST00000308588 LINC00337Q8N6G1 96 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms