RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 A0A096LNJ9 63 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 ODF3L2Q3SX64 289 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 CLPSL2Q6UWE3 100 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 C22orf34Q6ZV56 151 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 FAM19A1Q7Z5A9 133 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 ATP11AUNQ6ZP68 121 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 SSBP3-AS1Q7Z2R9 100 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 MKI67P46013 3256 aaKnown RBP2.81□□□□□ -1.96
USH2A-201ENST00000307340 REV3LO60673 3130 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 DSPP15924 2871 aaKnown RBP2.81□□□□□ -1.96
USH2A-201ENST00000307340 LINC00167Q96N53 147 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 SPRNQ5BIV9 151 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 CFAP46Q8IYW2 2715 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 H0Y9P7 68 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 GCN1Q92616 2671 aaKnown RBP2.81□□□□□ -1.96
USH2A-201ENST00000307340 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.81□□□□□ -1.96
USH2A-201ENST00000307340 KCNQ1DNQ9H478 68 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 POLQO75417 2590 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 A0A087X002 238 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 CDIP1Q9H305 208 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 FLNAP21333 2647 aaKnown RBP2.81□□□□□ -1.96
USH2A-201ENST00000307340 PRO0461Q9UI25 63 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 UQCR11O14957 56 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 ITPR3Q14573 2671 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 URB1-AS1Q96HZ7 61 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 JMJD1CQ15652 2540 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 AKAP13Q12802 2813 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 WFDC10BQ8IUB3 73 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 GRNP28799 593 aaKnown RBP2.8□□□□□ -1.96
USH2A-201ENST00000307340 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 LINC00694P0DN24 101 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 Q9BRP9 147 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 LINC00315P59091 139 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 KALRNO60229 2985 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 SEC61BP60468 96 aaKnown RBP2.79□□□□□ -1.96
USH2A-201ENST00000307340 BBC3Q96PG8 261 aaPredicted RBP2.79□□□□□ -1.96
USH2A-201ENST00000307340 PRR15Q8IV56 129 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 SPINK1P00995 79 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 OBSCN-AS1Q96MR7 158 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 C11orf21Q9P2W6 132 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 FAM104AQ969W3 186 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 A0A1B0GU69 56 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 Q6ZS46 218 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 PRUNE2Q8WUY3 3088 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 CDSNQ15517 529 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 HRCT1Q6UXD1 115 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 IGLV5-37A0A075B6J1 123 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 PROK1P58294 105 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 C7orf65Q6ZTY9 151 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 IGLV5-48A0A075B6I7 105 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 C1orf229Q6ZS94 237 aaPredicted RBP2.79□□□□□ -1.96
USH2A-201ENST00000307340 CHD6Q8TD26 2715 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 LINC00612Q8N6U2 182 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 MGAQ8IWI9 3026 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 CNBPP62633 177 aaKnown RBP2.78□□□□□ -1.96
USH2A-201ENST00000307340 PRR4Q16378 134 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 Q1T7F1 81 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 LINC00846Q9NV44 126 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 A0A096LPF7 62 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 C3orf84H3BNL1 204 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 C6orf48Q9UBA6 75 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 IGLV5-52A0A0A0MRZ9 124 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 PRB3Q04118 309 aaPredicted RBP2.77□□□□□ -1.97
USH2A-201ENST00000307340 TACC2O95359 2948 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 PLA2G2AP14555 144 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 LCA10Q71F78 164 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 C1orf64Q8NEQ6 169 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 PSPHP1O15172 72 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 FLG2Q5D862 2391 aaPredicted RBP2.77□□□□□ -1.97
USH2A-201ENST00000307340 XIRP2A4UGR9 3374 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 BOD1L1Q8NFC6 3051 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 IGLV7-46A0A075B6I9 117 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 IGKV2D-28P01615 120 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 BRCA2P51587 3418 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 LINC00313P59037 77 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 TEX15Q9BXT5 2789 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 C19orf84I3L1E1 186 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 EPG5Q9HCE0 2579 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 PRR9Q5T870 116 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 CEMP1Q6PRD7 247 aaPredicted RBP2.76□□□□□ -1.97
USH2A-201ENST00000307340 ACANP16112 2415 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 NBEAL1Q6ZS30 2694 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 A0A087WYN8 130 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 C1orf134Q5TEV5 83 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 SPRR4Q96PI1 79 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 ZNF462Q96JM2 2506 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 PRB4P10163 310 aaPredicted RBP2.76□□□□□ -1.97
USH2A-201ENST00000307340 LOC100131303A0A0U1RQF7 123 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 FASNP49327 2511 aaKnown RBP2.76□□□□□ -1.97
USH2A-201ENST00000307340 ADGRG4Q8IZF6 3080 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 FRMD6-AS1P0C7T7 363 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 ITPR2Q14571 2701 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 M0R2N4 97 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 COX6A2Q02221 97 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 LITAFQ99732 161 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 TTTY13Q9BZ97 58 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms