RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 A0A087WSZ3 146 aa7.33□□□□□ -1.24
SYNPO2-201ENST00000307142 Q6Q795 121 aa7.32□□□□□ -1.24
SYNPO2-201ENST00000307142 C19orf73Q9NVV2 129 aa7.32□□□□□ -1.24
SYNPO2-201ENST00000307142 C20orf197Q8N268 126 aa7.32□□□□□ -1.24
SYNPO2-201ENST00000307142 SERP1Q9Y6X1 66 aa7.32□□□□□ -1.24
SYNPO2-201ENST00000307142 PRUNE2Q8WUY3 3088 aa7.31□□□□□ -1.24
SYNPO2-201ENST00000307142 DNAH10OSP0CZ25 163 aa7.31□□□□□ -1.24
SYNPO2-201ENST00000307142 Q8N9L7 120 aa7.31□□□□□ -1.24
SYNPO2-201ENST00000307142 K7ERS5 55 aa7.31□□□□□ -1.24
SYNPO2-201ENST00000307142 Q9UF83 564 aa7.31□□□□□ -1.24
SYNPO2-201ENST00000307142 HECTD1Q9ULT8 2610 aa7.31□□□□□ -1.24
SYNPO2-201ENST00000307142 PRR15LQ9BU68 103 aa7.3□□□□□ -1.24
SYNPO2-201ENST00000307142 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
SYNPO2-201ENST00000307142 LINC00575Q6W349 94 aa7.29□□□□□ -1.24
SYNPO2-201ENST00000307142 SPTSSBQ8NFR3 76 aa7.29□□□□□ -1.24
SYNPO2-201ENST00000307142 BPTFQ12830 3046 aa7.29□□□□□ -1.24
SYNPO2-201ENST00000307142 CRYGAP11844 174 aa7.29□□□□□ -1.24
SYNPO2-201ENST00000307142 FLNBO75369 2602 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-201ENST00000307142 LINC01547P58512 204 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-201ENST00000307142 KRTAP1-1Q07627 177 aa7.28□□□□□ -1.24
SYNPO2-201ENST00000307142 SNURFQ9Y675 71 aa7.28□□□□□ -1.24
SYNPO2-201ENST00000307142 CSNK1G2-AS1Q8NCQ2 148 aa7.28□□□□□ -1.24
SYNPO2-201ENST00000307142 XIRP2A4UGR9 3374 aa7.27□□□□□ -1.25
SYNPO2-201ENST00000307142 TM2D3Q9BRN9 247 aa7.27□□□□□ -1.25
SYNPO2-201ENST00000307142 MT-ATP8P03928 68 aa7.27□□□□□ -1.25
SYNPO2-201ENST00000307142 KIAA0087Q14695 138 aa7.27□□□□□ -1.25
SYNPO2-201ENST00000307142 J3KT08 172 aa7.26□□□□□ -1.25
SYNPO2-201ENST00000307142 PRR4Q16378 134 aa7.26□□□□□ -1.25
SYNPO2-201ENST00000307142 MPLKIPQ8TAP9 179 aa7.26□□□□□ -1.25
SYNPO2-201ENST00000307142 A0A096LNJ9 63 aa7.25□□□□□ -1.25
SYNPO2-201ENST00000307142 SMR3BP02814 79 aaPredicted RBP7.25□□□□□ -1.25
SYNPO2-201ENST00000307142 GVQW2A0A096LPI5 108 aaPredicted RBP7.25□□□□□ -1.25
SYNPO2-201ENST00000307142 EPM2AB3EWF7 344 aa7.25□□□□□ -1.25
SYNPO2-201ENST00000307142 LINC00310P59036 64 aa7.25□□□□□ -1.25
SYNPO2-201ENST00000307142 CDH23Q9H251 3354 aa7.24□□□□□ -1.25
SYNPO2-201ENST00000307142 IGLV5-39A0A0G2JS06 123 aa7.23□□□□□ -1.25
SYNPO2-201ENST00000307142 HELZ2Q9BYK8 2649 aaKnown RBP7.23□□□□□ -1.25
SYNPO2-201ENST00000307142 FAM168BA1KXE4 195 aa7.22□□□□□ -1.25
SYNPO2-201ENST00000307142 BCE1O60756 84 aa7.22□□□□□ -1.25
SYNPO2-201ENST00000307142 LINC00336Q6ZUF6 198 aa7.22□□□□□ -1.25
SYNPO2-201ENST00000307142 IGKV2D-30A0A075B6S6 120 aa7.22□□□□□ -1.25
SYNPO2-201ENST00000307142 SPINK1P00995 79 aa7.22□□□□□ -1.25
SYNPO2-201ENST00000307142 IGKV2-30P06310 120 aa7.22□□□□□ -1.25
SYNPO2-201ENST00000307142 LINC00208Q96KT6 92 aa7.22□□□□□ -1.25
SYNPO2-201ENST00000307142 KLK9Q2XQG4 91 aa7.21□□□□□ -1.25
SYNPO2-201ENST00000307142 HCG22E2RYF7 251 aa7.21□□□□□ -1.25
SYNPO2-201ENST00000307142 CHD9Q3L8U1 2897 aa7.21□□□□□ -1.26
SYNPO2-201ENST00000307142 CFAP46Q8IYW2 2715 aa7.2□□□□□ -1.26
SYNPO2-201ENST00000307142 LINC01546A6NGU7 62 aa7.2□□□□□ -1.26
SYNPO2-201ENST00000307142 PCOTHQ58A44 107 aa7.19□□□□□ -1.26
SYNPO2-201ENST00000307142 Q8NBF4 154 aa7.19□□□□□ -1.26
SYNPO2-201ENST00000307142 UQCRQO14949 82 aa7.19□□□□□ -1.26
SYNPO2-201ENST00000307142 A0A087WTM6 91 aa7.19□□□□□ -1.26
SYNPO2-201ENST00000307142 TRANK1O15050 2925 aa7.18□□□□□ -1.26
SYNPO2-201ENST00000307142 ITPR3Q14573 2671 aa7.18□□□□□ -1.26
SYNPO2-201ENST00000307142 H0Y9P7 68 aa7.18□□□□□ -1.26
SYNPO2-201ENST00000307142 NDUFC1O43677 76 aa7.17□□□□□ -1.26
SYNPO2-201ENST00000307142 TRBV7-6A0A0J9YX20 115 aa7.17□□□□□ -1.26
SYNPO2-201ENST00000307142 Q6ZRX8 168 aa7.17□□□□□ -1.26
SYNPO2-201ENST00000307142 LINC00313P59037 77 aa7.16□□□□□ -1.26
SYNPO2-201ENST00000307142 USP24Q9UPU5 2620 aa7.16□□□□□ -1.26
SYNPO2-201ENST00000307142 FLNAP21333 2647 aaKnown RBP7.16□□□□□ -1.26
SYNPO2-201ENST00000307142 APLNQ9ULZ1 77 aa7.16□□□□□ -1.26
SYNPO2-201ENST00000307142 IGLV5-45A0A087WSX0 123 aa7.15□□□□□ -1.26
SYNPO2-201ENST00000307142 ELOF1P60002 83 aaKnown RBP7.15□□□□□ -1.26
SYNPO2-201ENST00000307142 GIG44P09565 113 aaPredicted RBP7.15□□□□□ -1.26
SYNPO2-201ENST00000307142 SERP2Q8N6R1 65 aa7.15□□□□□ -1.26
SYNPO2-201ENST00000307142 C7orf65Q6ZTY9 151 aa7.15□□□□□ -1.27
SYNPO2-201ENST00000307142 ST20-AS1Q8NBB2 130 aa7.15□□□□□ -1.27
SYNPO2-201ENST00000307142 LAMA2P24043 3122 aaKnown RBP7.15□□□□□ -1.27
SYNPO2-201ENST00000307142 Q96NJ1 140 aa7.15□□□□□ -1.27
SYNPO2-201ENST00000307142 IMUPQ9GZP8 106 aa7.15□□□□□ -1.27
SYNPO2-201ENST00000307142 ATP11AUNQ6ZP68 121 aa7.14□□□□□ -1.27
SYNPO2-201ENST00000307142 LINC00476Q8WZB0 136 aa7.14□□□□□ -1.27
SYNPO2-201ENST00000307142 BRK1Q8WUW1 75 aa7.13□□□□□ -1.27
SYNPO2-201ENST00000307142 CASC10Q5T4H9 136 aa7.13□□□□□ -1.27
SYNPO2-201ENST00000307142 SERTAD4-AS1Q5TG53 156 aa7.12□□□□□ -1.27
SYNPO2-201ENST00000307142 ATP5EP56381 51 aaPredicted RBP7.12□□□□□ -1.27
SYNPO2-201ENST00000307142 COX6B2Q6YFQ2 88 aa7.12□□□□□ -1.27
SYNPO2-201ENST00000307142 hDV103S1A0JD37 113 aa7.11□□□□□ -1.27
SYNPO2-201ENST00000307142 SVIPQ8NHG7 77 aa7.11□□□□□ -1.27
SYNPO2-201ENST00000307142 LINC00304Q8N9R0 145 aa7.1□□□□□ -1.27
SYNPO2-201ENST00000307142 V9GYY9 64 aa7.1□□□□□ -1.27
SYNPO2-201ENST00000307142 CDIP1Q9H305 208 aa7.1□□□□□ -1.27
SYNPO2-201ENST00000307142 TRAV7A0A075B6U4 112 aa7.1□□□□□ -1.27
SYNPO2-201ENST00000307142 A0A087WVE0 104 aa7.09□□□□□ -1.27
SYNPO2-201ENST00000307142 C15orf56Q8N910 161 aa7.09□□□□□ -1.27
SYNPO2-201ENST00000307142 A6NED7 52 aa7.09□□□□□ -1.27
SYNPO2-201ENST00000307142 SOSTDC1Q6X4U4 206 aa7.09□□□□□ -1.27
SYNPO2-201ENST00000307142 MGAQ8IWI9 3026 aa7.08□□□□□ -1.28
SYNPO2-201ENST00000307142 LINC00528Q8N1L1 170 aa7.08□□□□□ -1.28
SYNPO2-201ENST00000307142 CFAP54Q96N23 3096 aa7.07□□□□□ -1.28
SYNPO2-201ENST00000307142 FAM240AA0A1B0GVK7 77 aa7.07□□□□□ -1.28
SYNPO2-201ENST00000307142 UNC80Q8N2C7 3258 aa7.07□□□□□ -1.28
SYNPO2-201ENST00000307142 VPREB1P12018 145 aa7.07□□□□□ -1.28
SYNPO2-201ENST00000307142 ZNF861PO60384 105 aa7.06□□□□□ -1.28
SYNPO2-201ENST00000307142 MGAM2Q2M2H8 2515 aa7.06□□□□□ -1.28
SYNPO2-201ENST00000307142 C9orf92A6NGG3 77 aa7.06□□□□□ -1.28
SYNPO2-201ENST00000307142 IGLV1-50A0A075B6I6 118 aa7.06□□□□□ -1.28
SYNPO2-201ENST00000307142 C1orf64Q8NEQ6 169 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms