RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 C1orf43Q9BWL3 253 aa9.76□□□□□ -0.85
SMG8-201ENST00000300917 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
SMG8-201ENST00000300917 RPL18AQ02543 176 aaKnown RBP9.75□□□□□ -0.85
SMG8-201ENST00000300917 DNAL4O96015 105 aa9.75□□□□□ -0.85
SMG8-201ENST00000300917 H3BT86 120 aa9.74□□□□□ -0.85
SMG8-201ENST00000300917 S100A7L2Q5SY68 101 aa9.74□□□□□ -0.85
SMG8-201ENST00000300917 DNAH3Q8TD57 4116 aa9.74□□□□□ -0.85
SMG8-201ENST00000300917 LOC107984640A0A0U1RRK4 108 aa9.74□□□□□ -0.85
SMG8-201ENST00000300917 CCDC179H3BU77 68 aa9.74□□□□□ -0.85
SMG8-201ENST00000300917 GAGE2EQ4V326 116 aa9.74□□□□□ -0.85
SMG8-201ENST00000300917 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
SMG8-201ENST00000300917 GAGE2DQ9UEU5 116 aa9.74□□□□□ -0.85
SMG8-201ENST00000300917 H3BNG1 76 aa9.73□□□□□ -0.85
SMG8-201ENST00000300917 SEC61GP60059 68 aa9.73□□□□□ -0.85
SMG8-201ENST00000300917 Q6ZRU5 148 aa9.72□□□□□ -0.85
SMG8-201ENST00000300917 HUWE1Q7Z6Z7 4374 aaKnown RBP9.72□□□□□ -0.85
SMG8-201ENST00000300917 LINC00588Q9Y4M8 146 aa9.72□□□□□ -0.85
SMG8-201ENST00000300917 TRAV10A0A0B4J240 114 aa9.71□□□□□ -0.85
SMG8-201ENST00000300917 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.86
SMG8-201ENST00000300917 TM2D3Q9BRN9 247 aa9.71□□□□□ -0.86
SMG8-201ENST00000300917 COX17Q14061 63 aa9.71□□□□□ -0.86
SMG8-201ENST00000300917 C6orf99Q4VX62 202 aa9.71□□□□□ -0.86
SMG8-201ENST00000300917 TRACP01848 142 aa9.7□□□□□ -0.86
SMG8-201ENST00000300917 CASC10Q5T4H9 136 aa9.7□□□□□ -0.86
SMG8-201ENST00000300917 C15orf53Q8NAA6 179 aa9.7□□□□□ -0.86
SMG8-201ENST00000300917 F8WDY8 70 aa9.7□□□□□ -0.86
SMG8-201ENST00000300917 C15orf56Q8N910 161 aa9.7□□□□□ -0.86
SMG8-201ENST00000300917 KRTAP26-1Q6PEX3 210 aa9.69□□□□□ -0.86
SMG8-201ENST00000300917 TTC32Q5I0X7 151 aa9.68□□□□□ -0.86
SMG8-201ENST00000300917 LINC01556Q5JQF7 62 aa9.68□□□□□ -0.86
SMG8-201ENST00000300917 LYSTQ99698 3801 aa9.68□□□□□ -0.86
SMG8-201ENST00000300917 TMEM126AQ9H061 195 aa9.68□□□□□ -0.86
SMG8-201ENST00000300917 C22orf24Q9Y442 160 aa9.67□□□□□ -0.86
SMG8-201ENST00000300917 H0YGX0 51 aa9.66□□□□□ -0.86
SMG8-201ENST00000300917 PKIGQ9Y2B9 76 aa9.66□□□□□ -0.86
SMG8-201ENST00000300917 C14orf132Q9NPU4 83 aa9.65□□□□□ -0.86
SMG8-201ENST00000300917 TRBV10-3A0A0K0K1G6 114 aa9.64□□□□□ -0.87
SMG8-201ENST00000300917 NDUFC2O95298 119 aa9.64□□□□□ -0.87
SMG8-201ENST00000300917 NHLRC4P0CG21 123 aaPredicted RBP9.64□□□□□ -0.87
SMG8-201ENST00000300917 GAGE2AQ6NT46 116 aa9.64□□□□□ -0.87
SMG8-201ENST00000300917 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
SMG8-201ENST00000300917 DNAH10OSP0CZ25 163 aa9.62□□□□□ -0.87
SMG8-201ENST00000300917 Q6ZRP5 223 aa9.62□□□□□ -0.87
SMG8-201ENST00000300917 SNCGO76070 127 aa9.61□□□□□ -0.87
SMG8-201ENST00000300917 CSMD3Q7Z407 3707 aa9.61□□□□□ -0.87
SMG8-201ENST00000300917 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
SMG8-201ENST00000300917 NDUFV3P56181 108 aaKnown RBP9.6□□□□□ -0.87
SMG8-201ENST00000300917 FAM19A5Q7Z5A7 132 aaPredicted RBP9.6□□□□□ -0.87
SMG8-201ENST00000300917 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
SMG8-201ENST00000300917 USP17L23D6RBM5 183 aa9.6□□□□□ -0.87
SMG8-201ENST00000300917 Q8N814 137 aa9.6□□□□□ -0.87
SMG8-201ENST00000300917 ORMDL1Q9P0S3 153 aa9.6□□□□□ -0.87
SMG8-201ENST00000300917 GVQW2A0A096LPI5 108 aaPredicted RBP9.58□□□□□ -0.88
SMG8-201ENST00000300917 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
SMG8-201ENST00000300917 UBE2DNLQ8IWF7 75 aa9.57□□□□□ -0.88
SMG8-201ENST00000300917 TRAV23DV6A0A075B6W5 121 aa9.56□□□□□ -0.88
SMG8-201ENST00000300917 IGLV6-57P01721 117 aa9.55□□□□□ -0.88
SMG8-201ENST00000300917 VPREB1P12018 145 aa9.55□□□□□ -0.88
SMG8-201ENST00000300917 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
SMG8-201ENST00000300917 FAM168BA1KXE4 195 aa9.55□□□□□ -0.88
SMG8-201ENST00000300917 SMCR5Q8TEV8 140 aa9.55□□□□□ -0.88
SMG8-201ENST00000300917 DNAH10Q8IVF4 4471 aa9.55□□□□□ -0.88
SMG8-201ENST00000300917 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
SMG8-201ENST00000300917 DNAH9Q9NYC9 4486 aa9.54□□□□□ -0.88
SMG8-201ENST00000300917 SERTAD4-AS1Q5TG53 156 aa9.54□□□□□ -0.88
SMG8-201ENST00000300917 HRCT1Q6UXD1 115 aa9.54□□□□□ -0.88
SMG8-201ENST00000300917 LINC00575Q6W349 94 aa9.54□□□□□ -0.88
SMG8-201ENST00000300917 Q6ZQY7 126 aa9.54□□□□□ -0.88
SMG8-201ENST00000300917 hADV29S1A0JD25 119 aa9.53□□□□□ -0.88
SMG8-201ENST00000300917 RPL37AP8A6NKH3 93 aa9.53□□□□□ -0.88
SMG8-201ENST00000300917 ZNF73O43830 326 aaPredicted RBP9.53□□□□□ -0.88
SMG8-201ENST00000300917 INAFM2P0DMQ5 153 aa9.53□□□□□ -0.88
SMG8-201ENST00000300917 DIRC1Q969H9 104 aa9.53□□□□□ -0.88
SMG8-201ENST00000300917 LAMTOR3Q9UHA4 124 aa9.51□□□□□ -0.89
SMG8-201ENST00000300917 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.51□□□□□ -0.89
SMG8-201ENST00000300917 NKAPP1Q8N9T2 125 aa9.51□□□□□ -0.89
SMG8-201ENST00000300917 PSCAO43653 123 aa9.5□□□□□ -0.89
SMG8-201ENST00000300917 DNHD1Q96M86 4753 aa9.5□□□□□ -0.89
SMG8-201ENST00000300917 M0R378 163 aa9.49□□□□□ -0.89
SMG8-201ENST00000300917 COX7BP24311 80 aa9.49□□□□□ -0.89
SMG8-201ENST00000300917 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
SMG8-201ENST00000300917 IGKV2-24A0A0C4DH68 120 aa9.48□□□□□ -0.89
SMG8-201ENST00000300917 C4orf26Q17RF5 130 aa9.48□□□□□ -0.89
SMG8-201ENST00000300917 MEGF8Q7Z7M0 2845 aa9.48□□□□□ -0.89
SMG8-201ENST00000300917 FAM240AA0A1B0GVK7 77 aa9.48□□□□□ -0.89
SMG8-201ENST00000300917 TMEM256-PLSCR3K7ERE1 68 aa9.48□□□□□ -0.89
SMG8-201ENST00000300917 V9GYY9 64 aa9.47□□□□□ -0.89
SMG8-201ENST00000300917 LINC00846Q9NV44 126 aa9.47□□□□□ -0.89
SMG8-201ENST00000300917 DNAH7Q8WXX0 4024 aa9.47□□□□□ -0.89
SMG8-201ENST00000300917 C7orf33Q8WU49 177 aa9.46□□□□□ -0.89
SMG8-201ENST00000300917 B9D2Q9BPU9 175 aa9.46□□□□□ -0.89
SMG8-201ENST00000300917 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.89
SMG8-201ENST00000300917 M0R2N4 97 aa9.46□□□□□ -0.89
SMG8-201ENST00000300917 RMI2Q96E14 147 aa9.46□□□□□ -0.89
SMG8-201ENST00000300917 DEFB105AQ8NG35 78 aa9.46□□□□□ -0.9
SMG8-201ENST00000300917 Q6Q795 121 aa9.45□□□□□ -0.9
SMG8-201ENST00000300917 APLNQ9ULZ1 77 aa9.45□□□□□ -0.9
SMG8-201ENST00000300917 LINC00167Q96N53 147 aa9.44□□□□□ -0.9
SMG8-201ENST00000300917 PRKDCP78527 4128 aaKnown RBP9.44□□□□□ -0.9
SMG8-201ENST00000300917 TGP01266 2768 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms