RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 RETNLBQ9BQ08 111 aa11.68□□□□□ -0.54
CNTNAP3-201ENST00000297668 SMCPP49901 116 aaPredicted RBP11.68□□□□□ -0.54
CNTNAP3-201ENST00000297668 ACANP16112 2415 aa11.67□□□□□ -0.54
CNTNAP3-201ENST00000297668 IGLV5-45A0A087WSX0 123 aa11.66□□□□□ -0.54
CNTNAP3-201ENST00000297668 hDV103S1A0JD37 113 aa11.66□□□□□ -0.54
CNTNAP3-201ENST00000297668 PRO0461Q9UI25 63 aa11.66□□□□□ -0.54
CNTNAP3-201ENST00000297668 SPATA3Q8NHX4 192 aa11.66□□□□□ -0.54
CNTNAP3-201ENST00000297668 KIAA0087Q14695 138 aa11.66□□□□□ -0.54
CNTNAP3-201ENST00000297668 C1orf134Q5TEV5 83 aa11.65□□□□□ -0.54
CNTNAP3-201ENST00000297668 SBSPONQ8IVN8 264 aa11.65□□□□□ -0.54
CNTNAP3-201ENST00000297668 CD164Q04900 197 aa11.64□□□□□ -0.55
CNTNAP3-201ENST00000297668 EP400Q96L91 3159 aa11.64□□□□□ -0.55
CNTNAP3-201ENST00000297668 FHL3Q13643 280 aa11.64□□□□□ -0.55
CNTNAP3-201ENST00000297668 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
CNTNAP3-201ENST00000297668 SPINK1P00995 79 aa11.63□□□□□ -0.55
CNTNAP3-201ENST00000297668 BCE1O60756 84 aa11.62□□□□□ -0.55
CNTNAP3-201ENST00000297668 Q9UF83 564 aa11.62□□□□□ -0.55
CNTNAP3-201ENST00000297668 C1orf64Q8NEQ6 169 aa11.61□□□□□ -0.55
CNTNAP3-201ENST00000297668 X6R8D5 127 aa11.61□□□□□ -0.55
CNTNAP3-201ENST00000297668 C6orf48Q9UBA6 75 aa11.61□□□□□ -0.55
CNTNAP3-201ENST00000297668 FAM218AQ96MZ4 157 aa11.6□□□□□ -0.55
CNTNAP3-201ENST00000297668 SMIM29Q86T20 159 aa11.6□□□□□ -0.55
CNTNAP3-201ENST00000297668 LINC00167Q96N53 147 aa11.6□□□□□ -0.55
CNTNAP3-201ENST00000297668 WIPF1O43516 503 aa11.57□□□□□ -0.56
CNTNAP3-201ENST00000297668 ANKRD17O75179 2603 aaKnown RBP11.55□□□□□ -0.56
CNTNAP3-201ENST00000297668 LINC00336Q6ZUF6 198 aa11.54□□□□□ -0.56
CNTNAP3-201ENST00000297668 NHLRC4P0CG21 123 aaPredicted RBP11.53□□□□□ -0.56
CNTNAP3-201ENST00000297668 ELOF1P60002 83 aaKnown RBP11.53□□□□□ -0.56
CNTNAP3-201ENST00000297668 A0A1B0GW54 56 aa11.52□□□□□ -0.57
CNTNAP3-201ENST00000297668 H3BNG1 76 aa11.51□□□□□ -0.57
CNTNAP3-201ENST00000297668 IGKV2D-30A0A075B6S6 120 aa11.51□□□□□ -0.57
CNTNAP3-201ENST00000297668 IGKV2-30P06310 120 aa11.51□□□□□ -0.57
CNTNAP3-201ENST00000297668 PTPRBP23467 1997 aa11.51□□□□□ -0.57
CNTNAP3-201ENST00000297668 FSHBP01225 129 aa11.5□□□□□ -0.57
CNTNAP3-201ENST00000297668 Q6ZQT0 140 aa11.5□□□□□ -0.57
CNTNAP3-201ENST00000297668 TP53AIP1Q9HCN2 124 aa11.49□□□□□ -0.57
CNTNAP3-201ENST00000297668 Q8NBF4 154 aa11.48□□□□□ -0.57
CNTNAP3-201ENST00000297668 MDFIQ99750 246 aa11.48□□□□□ -0.57
CNTNAP3-201ENST00000297668 MOBPQ13875 183 aa11.48□□□□□ -0.57
CNTNAP3-201ENST00000297668 LOC110117498A0A087WWA1 95 aa11.47□□□□□ -0.57
CNTNAP3-201ENST00000297668 Q6ZRX8 168 aa11.46□□□□□ -0.57
CNTNAP3-201ENST00000297668 LINC00476Q8WZB0 136 aa11.44□□□□□ -0.58
CNTNAP3-201ENST00000297668 EPG5Q9HCE0 2579 aa11.44□□□□□ -0.58
CNTNAP3-201ENST00000297668 KLK9Q2XQG4 91 aa11.43□□□□□ -0.58
CNTNAP3-201ENST00000297668 SPACA4Q8TDM5 124 aa11.43□□□□□ -0.58
CNTNAP3-201ENST00000297668 LITAFQ99732 161 aa11.42□□□□□ -0.58
CNTNAP3-201ENST00000297668 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
CNTNAP3-201ENST00000297668 A0A1B0GU69 56 aa11.4□□□□□ -0.58
CNTNAP3-201ENST00000297668 PHF5AQ7RTV0 110 aaKnown RBP11.4□□□□□ -0.58
CNTNAP3-201ENST00000297668 Q8NAQ8 132 aa11.4□□□□□ -0.58
CNTNAP3-201ENST00000297668 C7orf65Q6ZTY9 151 aa11.4□□□□□ -0.59
CNTNAP3-201ENST00000297668 ACYP2P14621 99 aa11.39□□□□□ -0.59
CNTNAP3-201ENST00000297668 H3BPC8 53 aa11.38□□□□□ -0.59
CNTNAP3-201ENST00000297668 ST20-AS1Q8NBB2 130 aa11.38□□□□□ -0.59
CNTNAP3-201ENST00000297668 TM2D3Q9BRN9 247 aa11.38□□□□□ -0.59
CNTNAP3-201ENST00000297668 C8orf87E5RJ46 101 aa11.37□□□□□ -0.59
CNTNAP3-201ENST00000297668 EPM2AB3EWF7 344 aa11.37□□□□□ -0.59
CNTNAP3-201ENST00000297668 COL27A1Q8IZC6 1860 aaPredicted RBP11.37□□□□□ -0.59
CNTNAP3-201ENST00000297668 USP24Q9UPU5 2620 aa11.37□□□□□ -0.59
CNTNAP3-201ENST00000297668 GVQW2A0A096LPI5 108 aaPredicted RBP11.36□□□□□ -0.59
CNTNAP3-201ENST00000297668 TRAV22A0A0B4J277 110 aa11.36□□□□□ -0.59
CNTNAP3-201ENST00000297668 C16orf90A8MZG2 172 aa11.35□□□□□ -0.59
CNTNAP3-201ENST00000297668 LINC00588Q9Y4M8 146 aa11.34□□□□□ -0.59
CNTNAP3-201ENST00000297668 Q6ZRP5 223 aa11.33□□□□□ -0.6
CNTNAP3-201ENST00000297668 PRRC2CQ9Y520 2896 aaKnown RBP11.33□□□□□ -0.6
CNTNAP3-201ENST00000297668 IGLV6-57P01721 117 aa11.32□□□□□ -0.6
CNTNAP3-201ENST00000297668 KRTAP24-1Q3LI83 254 aa11.32□□□□□ -0.6
CNTNAP3-201ENST00000297668 COL4A2P08572 1712 aa11.32□□□□□ -0.6
CNTNAP3-201ENST00000297668 KTN1-AS1Q86SY8 53 aa11.32□□□□□ -0.6
CNTNAP3-201ENST00000297668 FLNBO75369 2602 aaKnown RBP11.31□□□□□ -0.6
CNTNAP3-201ENST00000297668 NBDYA0A0U1RRE5 68 aa11.31□□□□□ -0.6
CNTNAP3-201ENST00000297668 RPL37AP61513 92 aaKnown RBP11.3□□□□□ -0.6
CNTNAP3-201ENST00000297668 TRBV7-4A0A0J9YYF1 115 aa11.3□□□□□ -0.6
CNTNAP3-201ENST00000297668 RTL8CO15255 209 aa11.29□□□□□ -0.6
CNTNAP3-201ENST00000297668 UTRNP46939 3433 aa11.28□□□□□ -0.6
CNTNAP3-201ENST00000297668 CHTF8P0CG12 524 aa11.27□□□□□ -0.6
CNTNAP3-201ENST00000297668 LINC00313P59037 77 aa11.27□□□□□ -0.6
CNTNAP3-201ENST00000297668 LCA10Q71F78 164 aa11.27□□□□□ -0.61
CNTNAP3-201ENST00000297668 DNAH10OSP0CZ25 163 aa11.26□□□□□ -0.61
CNTNAP3-201ENST00000297668 MGAM2Q2M2H8 2515 aa11.26□□□□□ -0.61
CNTNAP3-201ENST00000297668 A8MUN3 132 aa11.26□□□□□ -0.61
CNTNAP3-201ENST00000297668 CYP4F30PQ9H0H9 118 aa11.25□□□□□ -0.61
CNTNAP3-201ENST00000297668 EIF4EBP3O60516 100 aaPredicted RBP11.24□□□□□ -0.61
CNTNAP3-201ENST00000297668 ERC2-IT1O76042 136 aa11.23□□□□□ -0.61
CNTNAP3-201ENST00000297668 ATP11AUNQ6ZP68 121 aa11.23□□□□□ -0.61
CNTNAP3-201ENST00000297668 CSNK1G2-AS1Q8NCQ2 148 aa11.22□□□□□ -0.61
CNTNAP3-201ENST00000297668 FAM168BA1KXE4 195 aa11.22□□□□□ -0.61
CNTNAP3-201ENST00000297668 TYMSOSQ8TAI1 123 aa11.22□□□□□ -0.61
CNTNAP3-201ENST00000297668 A8MWP4 228 aa11.21□□□□□ -0.61
CNTNAP3-201ENST00000297668 K7EQZ3 153 aa11.21□□□□□ -0.61
CNTNAP3-201ENST00000297668 PCNTO95613 3336 aa11.21□□□□□ -0.61
CNTNAP3-201ENST00000297668 LINC00528Q8N1L1 170 aa11.2□□□□□ -0.62
CNTNAP3-201ENST00000297668 KCNQ1DNQ9H478 68 aa11.2□□□□□ -0.62
CNTNAP3-201ENST00000297668 LOC101927531A0A1B0GV80 90 aa11.19□□□□□ -0.62
CNTNAP3-201ENST00000297668 IGLV1-50A0A075B6I6 118 aa11.18□□□□□ -0.62
CNTNAP3-201ENST00000297668 KLKP1Q107X0 134 aa11.18□□□□□ -0.62
CNTNAP3-201ENST00000297668 PCSK5Q92824 1860 aa11.16□□□□□ -0.62
CNTNAP3-201ENST00000297668 FAM229AH3BQW9 127 aa11.15□□□□□ -0.62
CNTNAP3-201ENST00000297668 MRPL34Q9BQ48 92 aaKnown RBP11.15□□□□□ -0.62
CNTNAP3-201ENST00000297668 PRR34Q9NV39 138 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms