RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 USP9XQ93008 2570 aaPredicted RBP9.8□□□□□ -0.84
COL1A2-201ENST00000297268 FN1P02751 2386 aaKnown RBP9.8□□□□□ -0.84
COL1A2-201ENST00000297268 COL4A2P08572 1712 aa9.79□□□□□ -0.84
COL1A2-201ENST00000297268 ELOF1P60002 83 aaKnown RBP9.79□□□□□ -0.84
COL1A2-201ENST00000297268 ZFYVE26Q68DK2 2539 aa9.78□□□□□ -0.84
COL1A2-201ENST00000297268 RETNLBQ9BQ08 111 aa9.78□□□□□ -0.84
COL1A2-201ENST00000297268 TM2D3Q9BRN9 247 aa9.78□□□□□ -0.84
COL1A2-201ENST00000297268 LIMD2Q9BT23 127 aa9.78□□□□□ -0.84
COL1A2-201ENST00000297268 TLN2Q9Y4G6 2542 aa9.78□□□□□ -0.84
COL1A2-201ENST00000297268 ABCA12Q86UK0 2595 aa9.76□□□□□ -0.85
COL1A2-201ENST00000297268 LINC01556Q5JQF7 62 aa9.76□□□□□ -0.85
COL1A2-201ENST00000297268 KLK9Q2XQG4 91 aa9.75□□□□□ -0.85
COL1A2-201ENST00000297268 CHD8Q9HCK8 2581 aa9.75□□□□□ -0.85
COL1A2-201ENST00000297268 COL27A1Q8IZC6 1860 aaPredicted RBP9.75□□□□□ -0.85
COL1A2-201ENST00000297268 NHLRC4P0CG21 123 aaPredicted RBP9.75□□□□□ -0.85
COL1A2-201ENST00000297268 SETD2Q9BYW2 2564 aaPredicted RBP9.74□□□□□ -0.85
COL1A2-201ENST00000297268 LINC00167Q96N53 147 aa9.73□□□□□ -0.85
COL1A2-201ENST00000297268 SPTBN4Q9H254 2564 aa9.73□□□□□ -0.85
COL1A2-201ENST00000297268 USP9YO00507 2555 aaPredicted RBP9.72□□□□□ -0.85
COL1A2-201ENST00000297268 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
COL1A2-201ENST00000297268 A0A1B0GW54 56 aa9.71□□□□□ -0.85
COL1A2-201ENST00000297268 SPINK1P00995 79 aa9.7□□□□□ -0.86
COL1A2-201ENST00000297268 X6R8D5 127 aa9.7□□□□□ -0.86
COL1A2-201ENST00000297268 Q8NBF4 154 aa9.69□□□□□ -0.86
COL1A2-201ENST00000297268 ZNF462Q96JM2 2506 aa9.68□□□□□ -0.86
COL1A2-201ENST00000297268 NUPR2A6NF83 97 aa9.68□□□□□ -0.86
COL1A2-201ENST00000297268 IGLV5-52A0A0A0MRZ9 124 aa9.67□□□□□ -0.86
COL1A2-201ENST00000297268 Q6ZRX8 168 aa9.67□□□□□ -0.86
COL1A2-201ENST00000297268 LRRK2Q5S007 2527 aa9.66□□□□□ -0.86
COL1A2-201ENST00000297268 LINC00476Q8WZB0 136 aa9.66□□□□□ -0.86
COL1A2-201ENST00000297268 MUC4Q99102 2169 aa9.65□□□□□ -0.86
COL1A2-201ENST00000297268 PCSK5Q92824 1860 aa9.65□□□□□ -0.86
COL1A2-201ENST00000297268 TP53AIP1Q9HCN2 124 aa9.65□□□□□ -0.87
COL1A2-201ENST00000297268 PKD1L2Q7Z442 2459 aa9.64□□□□□ -0.87
COL1A2-201ENST00000297268 ST20-AS1Q8NBB2 130 aa9.64□□□□□ -0.87
COL1A2-201ENST00000297268 PCNTO95613 3336 aa9.64□□□□□ -0.87
COL1A2-201ENST00000297268 IGLV6-57P01721 117 aa9.64□□□□□ -0.87
COL1A2-201ENST00000297268 SPAG11AQ6PDA7 123 aa9.63□□□□□ -0.87
COL1A2-201ENST00000297268 H3BPC8 53 aa9.62□□□□□ -0.87
COL1A2-201ENST00000297268 GVQW2A0A096LPI5 108 aaPredicted RBP9.6□□□□□ -0.87
COL1A2-201ENST00000297268 FSHBP01225 129 aa9.6□□□□□ -0.87
COL1A2-201ENST00000297268 A0A1B0GU69 56 aa9.6□□□□□ -0.87
COL1A2-201ENST00000297268 H3BNG1 76 aa9.59□□□□□ -0.87
COL1A2-201ENST00000297268 RPL37AP61513 92 aaKnown RBP9.59□□□□□ -0.87
COL1A2-201ENST00000297268 ERC2-IT1O76042 136 aa9.59□□□□□ -0.87
COL1A2-201ENST00000297268 VPREB1P12018 145 aa9.59□□□□□ -0.87
COL1A2-201ENST00000297268 IGKV2D-30A0A075B6S6 120 aa9.58□□□□□ -0.88
COL1A2-201ENST00000297268 IGKV2-30P06310 120 aa9.58□□□□□ -0.88
COL1A2-201ENST00000297268 TRAV22A0A0B4J277 110 aa9.58□□□□□ -0.88
COL1A2-201ENST00000297268 ACYP2P14621 99 aa9.57□□□□□ -0.88
COL1A2-201ENST00000297268 Q6ZRP5 223 aa9.57□□□□□ -0.88
COL1A2-201ENST00000297268 MOBPQ13875 183 aa9.57□□□□□ -0.88
COL1A2-201ENST00000297268 TRBV7-4A0A0J9YYF1 115 aa9.56□□□□□ -0.88
COL1A2-201ENST00000297268 K7EQZ3 153 aa9.55□□□□□ -0.88
COL1A2-201ENST00000297268 KLKP1Q107X0 134 aa9.55□□□□□ -0.88
COL1A2-201ENST00000297268 Q8NAQ8 132 aa9.55□□□□□ -0.88
COL1A2-201ENST00000297268 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
COL1A2-201ENST00000297268 CHD7Q9P2D1 2997 aa9.54□□□□□ -0.88
COL1A2-201ENST00000297268 C7orf65Q6ZTY9 151 aa9.54□□□□□ -0.88
COL1A2-201ENST00000297268 PRRC2CQ9Y520 2896 aaKnown RBP9.53□□□□□ -0.88
COL1A2-201ENST00000297268 EPM2AB3EWF7 344 aa9.53□□□□□ -0.88
COL1A2-201ENST00000297268 A8MUN3 132 aa9.52□□□□□ -0.89
COL1A2-201ENST00000297268 C1orf134Q5TEV5 83 aa9.52□□□□□ -0.89
COL1A2-201ENST00000297268 C9orf129Q5T035 196 aaKnown RBP9.51□□□□□ -0.89
COL1A2-201ENST00000297268 H7BZZ5 65 aa9.51□□□□□ -0.89
COL1A2-201ENST00000297268 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
COL1A2-201ENST00000297268 LINC00336Q6ZUF6 198 aa9.5□□□□□ -0.89
COL1A2-201ENST00000297268 FAM168BA1KXE4 195 aa9.49□□□□□ -0.89
COL1A2-201ENST00000297268 CSNK1G2-AS1Q8NCQ2 148 aa9.49□□□□□ -0.89
COL1A2-201ENST00000297268 FASNP49327 2511 aaKnown RBP9.49□□□□□ -0.89
COL1A2-201ENST00000297268 SERTAD4-AS1Q5TG53 156 aa9.49□□□□□ -0.89
COL1A2-201ENST00000297268 C16orf90A8MZG2 172 aa9.48□□□□□ -0.89
COL1A2-201ENST00000297268 MTORP42345 2549 aa9.48□□□□□ -0.89
COL1A2-201ENST00000297268 HTTP42858 3142 aa9.48□□□□□ -0.89
COL1A2-201ENST00000297268 A8MWP4 228 aa9.47□□□□□ -0.89
COL1A2-201ENST00000297268 KCNQ1DNQ9H478 68 aa9.47□□□□□ -0.89
COL1A2-201ENST00000297268 LINC00588Q9Y4M8 146 aa9.46□□□□□ -0.9
COL1A2-201ENST00000297268 COA5Q86WW8 74 aa9.46□□□□□ -0.9
COL1A2-201ENST00000297268 MDFIQ99750 246 aa9.45□□□□□ -0.9
COL1A2-201ENST00000297268 ATP11AUNQ6ZP68 121 aa9.45□□□□□ -0.9
COL1A2-201ENST00000297268 POLQO75417 2590 aa9.45□□□□□ -0.9
COL1A2-201ENST00000297268 IGLV1-50A0A075B6I6 118 aa9.45□□□□□ -0.9
COL1A2-201ENST00000297268 SPACA4Q8TDM5 124 aa9.45□□□□□ -0.9
COL1A2-201ENST00000297268 ZNF575Q86XF7 245 aa9.42□□□□□ -0.9
COL1A2-201ENST00000297268 CYP4F30PQ9H0H9 118 aa9.42□□□□□ -0.9
COL1A2-201ENST00000297268 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
COL1A2-201ENST00000297268 C8orf87E5RJ46 101 aa9.42□□□□□ -0.9
COL1A2-201ENST00000297268 C5orf42Q9H799 3197 aa9.41□□□□□ -0.9
COL1A2-201ENST00000297268 CHD9Q3L8U1 2897 aa9.41□□□□□ -0.9
COL1A2-201ENST00000297268 Q8N377 158 aa9.41□□□□□ -0.9
COL1A2-201ENST00000297268 LINC00313P59037 77 aa9.41□□□□□ -0.9
COL1A2-201ENST00000297268 IGFL1Q6UW32 110 aa9.41□□□□□ -0.9
COL1A2-201ENST00000297268 PRR34Q9NV39 138 aa9.41□□□□□ -0.9
COL1A2-201ENST00000297268 LOC101927531A0A1B0GV80 90 aa9.4□□□□□ -0.9
COL1A2-201ENST00000297268 GIG44P09565 113 aaPredicted RBP9.4□□□□□ -0.9
COL1A2-201ENST00000297268 DNAH10OSP0CZ25 163 aa9.4□□□□□ -0.9
COL1A2-201ENST00000297268 ANKRD17O75179 2603 aaKnown RBP9.4□□□□□ -0.9
COL1A2-201ENST00000297268 IGLV8-61A0A075B6I0 122 aa9.39□□□□□ -0.91
COL1A2-201ENST00000297268 LINC01600Q96MT4 127 aa9.38□□□□□ -0.91
COL1A2-201ENST00000297268 C15orf56Q8N910 161 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms