RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 Q6JHZ5 121 aa9.2□□□□□ -0.94
TNFRSF21-201ENST00000296861 CYSTM1Q9H1C7 97 aa9.2□□□□□ -0.94
TNFRSF21-201ENST00000296861 RBM3P98179 157 aaKnown RBP9.2□□□□□ -0.94
TNFRSF21-201ENST00000296861 UPK3BQ9BT76 320 aa9.2□□□□□ -0.94
TNFRSF21-201ENST00000296861 STAB1Q9NY15 2570 aa9.2□□□□□ -0.94
TNFRSF21-201ENST00000296861 SNURFQ9Y675 71 aa9.19□□□□□ -0.94
TNFRSF21-201ENST00000296861 IGHV4-28A0A0C4DH34 117 aa9.19□□□□□ -0.94
TNFRSF21-201ENST00000296861 Q8N814 137 aa9.19□□□□□ -0.94
TNFRSF21-201ENST00000296861 SPATA3Q8NHX4 192 aa9.19□□□□□ -0.94
TNFRSF21-201ENST00000296861 COL6A5A8TX70 2615 aa9.18□□□□□ -0.94
TNFRSF21-201ENST00000296861 ZNF561-AS1K7EIQ3 104 aa9.18□□□□□ -0.94
TNFRSF21-201ENST00000296861 TMEM256-PLSCR3K7ERE1 68 aa9.18□□□□□ -0.94
TNFRSF21-201ENST00000296861 CRYGAP11844 174 aa9.18□□□□□ -0.94
TNFRSF21-201ENST00000296861 CYSRT1A8MQ03 144 aa9.18□□□□□ -0.94
TNFRSF21-201ENST00000296861 LINC01561Q8N1V8 128 aa9.18□□□□□ -0.94
TNFRSF21-201ENST00000296861 TRRAPQ9Y4A5 3859 aa9.17□□□□□ -0.94
TNFRSF21-201ENST00000296861 C2orf48Q96LS8 159 aa9.17□□□□□ -0.94
TNFRSF21-201ENST00000296861 JMJD7-PLA2G4BH0Y9G9 81 aa9.16□□□□□ -0.94
TNFRSF21-201ENST00000296861 SEC61GP60059 68 aa9.16□□□□□ -0.94
TNFRSF21-201ENST00000296861 A0A0U1RQV1 116 aa9.16□□□□□ -0.94
TNFRSF21-201ENST00000296861 CCKP06307 115 aa9.16□□□□□ -0.94
TNFRSF21-201ENST00000296861 CD164L2Q6UWJ8 174 aa9.16□□□□□ -0.94
TNFRSF21-201ENST00000296861 Q8IZM0 81 aa9.16□□□□□ -0.94
TNFRSF21-201ENST00000296861 CELA1Q9UNI1 258 aa9.16□□□□□ -0.94
TNFRSF21-201ENST00000296861 IL17DQ8TAD2 202 aa9.16□□□□□ -0.94
TNFRSF21-201ENST00000296861 CAMK2N2Q96S95 79 aa9.15□□□□□ -0.94
TNFRSF21-201ENST00000296861 NSD1Q96L73 2696 aaPredicted RBP9.15□□□□□ -0.94
TNFRSF21-201ENST00000296861 CSNK1G2-AS1Q8NCQ2 148 aa9.14□□□□□ -0.95
TNFRSF21-201ENST00000296861 TMEM258P61165 79 aa9.14□□□□□ -0.95
TNFRSF21-201ENST00000296861 C19orf73Q9NVV2 129 aa9.14□□□□□ -0.95
TNFRSF21-201ENST00000296861 INAFM1C9JVW0 142 aa9.14□□□□□ -0.95
TNFRSF21-201ENST00000296861 M0R2N4 97 aa9.14□□□□□ -0.95
TNFRSF21-201ENST00000296861 PRB2P02812 416 aaPredicted RBP9.13□□□□□ -0.95
TNFRSF21-201ENST00000296861 TRBV10-3A0A0K0K1G6 114 aa9.13□□□□□ -0.95
TNFRSF21-201ENST00000296861 WIPF1O43516 503 aa9.13□□□□□ -0.95
TNFRSF21-201ENST00000296861 Q8N9L7 120 aa9.13□□□□□ -0.95
TNFRSF21-201ENST00000296861 DPH3Q96FX2 82 aa9.13□□□□□ -0.95
TNFRSF21-201ENST00000296861 IGKV2D-24A0A075B6R9 120 aa9.12□□□□□ -0.95
TNFRSF21-201ENST00000296861 FAM19A3Q7Z5A8 133 aa9.12□□□□□ -0.95
TNFRSF21-201ENST00000296861 RETNQ9HD89 108 aa9.12□□□□□ -0.95
TNFRSF21-201ENST00000296861 LY6G6DO95868 133 aa9.11□□□□□ -0.95
TNFRSF21-201ENST00000296861 Q8NDZ9 215 aa9.11□□□□□ -0.95
TNFRSF21-201ENST00000296861 X6R8D5 127 aa9.11□□□□□ -0.95
TNFRSF21-201ENST00000296861 FBN1P35555 2871 aaKnown RBP9.1□□□□□ -0.95
TNFRSF21-201ENST00000296861 C3orf84H3BNL1 204 aa9.1□□□□□ -0.95
TNFRSF21-201ENST00000296861 PKD1L1Q8TDX9 2849 aa9.09□□□□□ -0.95
TNFRSF21-201ENST00000296861 SPART-AS1P0CW21 52 aa9.09□□□□□ -0.95
TNFRSF21-201ENST00000296861 DIRC1Q969H9 104 aa9.09□□□□□ -0.95
TNFRSF21-201ENST00000296861 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF21-201ENST00000296861 APOC4P55056 127 aa9.07□□□□□ -0.96
TNFRSF21-201ENST00000296861 NANOS2P60321 138 aaKnown RBP9.07□□□□□ -0.96
TNFRSF21-201ENST00000296861 KRTAP1-1Q07627 177 aa9.07□□□□□ -0.96
TNFRSF21-201ENST00000296861 F8WDY8 70 aa9.07□□□□□ -0.96
TNFRSF21-201ENST00000296861 FAM236DA0A1B0GTK5 79 aa9.06□□□□□ -0.96
TNFRSF21-201ENST00000296861 A0A1B0GUV1 79 aa9.06□□□□□ -0.96
TNFRSF21-201ENST00000296861 FAM236CP0DP71 79 aa9.06□□□□□ -0.96
TNFRSF21-201ENST00000296861 KRTAP10-3P60369 221 aa9.06□□□□□ -0.96
TNFRSF21-201ENST00000296861 LINC00575Q6W349 94 aa9.06□□□□□ -0.96
TNFRSF21-201ENST00000296861 KIAA0087Q14695 138 aa9.05□□□□□ -0.96
TNFRSF21-201ENST00000296861 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
TNFRSF21-201ENST00000296861 WFDC10BQ8IUB3 73 aa9.05□□□□□ -0.96
TNFRSF21-201ENST00000296861 COX7BP24311 80 aa9.04□□□□□ -0.96
TNFRSF21-201ENST00000296861 RMI2Q96E14 147 aa9.04□□□□□ -0.96
TNFRSF21-201ENST00000296861 TRAV10A0A0B4J240 114 aa9.04□□□□□ -0.96
TNFRSF21-201ENST00000296861 RPS28P62857 69 aaKnown RBP9.03□□□□□ -0.96
TNFRSF21-201ENST00000296861 C9orf66Q5T8R8 295 aa9.03□□□□□ -0.96
TNFRSF21-201ENST00000296861 Q6ZVQ6 151 aa9.03□□□□□ -0.96
TNFRSF21-201ENST00000296861 RPL37AP8A6NKH3 93 aa9.03□□□□□ -0.96
TNFRSF21-201ENST00000296861 LYRM9A8MSI8 78 aa9.03□□□□□ -0.96
TNFRSF21-201ENST00000296861 ZNF73O43830 326 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF21-201ENST00000296861 ATP5EP2Q5VTU8 51 aa9.03□□□□□ -0.96
TNFRSF21-201ENST00000296861 NKAPP1Q8N9T2 125 aa9.02□□□□□ -0.96
TNFRSF21-201ENST00000296861 OBSCN-AS1Q96MR7 158 aa9.02□□□□□ -0.96
TNFRSF21-201ENST00000296861 V9GYY9 64 aa9.02□□□□□ -0.96
TNFRSF21-201ENST00000296861 LINC01547P58512 204 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF21-201ENST00000296861 LINC00336Q6ZUF6 198 aa9.02□□□□□ -0.97
TNFRSF21-201ENST00000296861 NDUFC2O95298 119 aa9.01□□□□□ -0.97
TNFRSF21-201ENST00000296861 IGHV4-30-4P0DP06 118 aa9.01□□□□□ -0.97
TNFRSF21-201ENST00000296861 OXTP01178 125 aa9.01□□□□□ -0.97
TNFRSF21-201ENST00000296861 MRAPQ8TCY5 172 aa9.01□□□□□ -0.97
TNFRSF21-201ENST00000296861 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
TNFRSF21-201ENST00000296861 NREPQ16612 68 aa8.99□□□□□ -0.97
TNFRSF21-201ENST00000296861 F8WEM9 126 aa8.99□□□□□ -0.97
TNFRSF21-201ENST00000296861 KPRPQ5T749 579 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF21-201ENST00000296861 KMT2BQ9UMN6 2715 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF21-201ENST00000296861 ANK3Q12955 4377 aaKnown RBP8.99□□□□□ -0.97
TNFRSF21-201ENST00000296861 COX17Q14061 63 aa8.98□□□□□ -0.97
TNFRSF21-201ENST00000296861 LELP1Q5T871 98 aa8.98□□□□□ -0.97
TNFRSF21-201ENST00000296861 Q6ZRU5 148 aa8.98□□□□□ -0.97
TNFRSF21-201ENST00000296861 Q6ZTC4 211 aa8.98□□□□□ -0.97
TNFRSF21-201ENST00000296861 MUC7Q8TAX7 377 aa8.98□□□□□ -0.97
TNFRSF21-201ENST00000296861 Q6ZQT0 140 aa8.97□□□□□ -0.97
TNFRSF21-201ENST00000296861 MPLKIPQ8TAP9 179 aa8.97□□□□□ -0.97
TNFRSF21-201ENST00000296861 LRCOL1A6NCL2 159 aa8.96□□□□□ -0.97
TNFRSF21-201ENST00000296861 TENM3Q9P273 2699 aa8.96□□□□□ -0.97
TNFRSF21-201ENST00000296861 BRK1Q8WUW1 75 aa8.96□□□□□ -0.98
TNFRSF21-201ENST00000296861 TRAV7A0A075B6U4 112 aa8.96□□□□□ -0.98
TNFRSF21-201ENST00000296861 BPY2O14599 106 aa8.96□□□□□ -0.98
TNFRSF21-201ENST00000296861 PRR4Q16378 134 aa8.96□□□□□ -0.98
TNFRSF21-201ENST00000296861 TM2D3Q9BRN9 247 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms