RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 C5orf52A6NGY3 159 aa16.66■□□□□ 0.26
SSU72-201ENST00000291386 PKHD1L1Q86WI1 4243 aa16.66■□□□□ 0.26
SSU72-201ENST00000291386 MEIG1Q5JSS6 88 aa16.65■□□□□ 0.26
SSU72-201ENST00000291386 SMIM13P0DJ93 91 aa16.64■□□□□ 0.25
SSU72-201ENST00000291386 HNRNPA3P51991 378 aaKnown RBP16.64■□□□□ 0.25
SSU72-201ENST00000291386 PSORS1C2Q9UIG4 136 aa16.64■□□□□ 0.25
SSU72-201ENST00000291386 LBHQ53QV2 105 aaPredicted RBP16.63■□□□□ 0.25
SSU72-201ENST00000291386 KRTAP11-1Q8IUC1 163 aa16.62■□□□□ 0.25
SSU72-201ENST00000291386 A0A0U1RRA0 63 aa16.61■□□□□ 0.25
SSU72-201ENST00000291386 MRPL55Q7Z7F7 128 aaKnown RBP16.61■□□□□ 0.25
SSU72-201ENST00000291386 UBE2BP63146 152 aa16.6■□□□□ 0.25
SSU72-201ENST00000291386 FLG2Q5D862 2391 aaPredicted RBP16.6■□□□□ 0.25
SSU72-201ENST00000291386 VPREB1P12018 145 aa16.58■□□□□ 0.24
SSU72-201ENST00000291386 RPL24P83731 157 aaKnown RBP16.58■□□□□ 0.24
SSU72-201ENST00000291386 MIR7-3HGQ8N6C7 128 aa16.58■□□□□ 0.24
SSU72-201ENST00000291386 IGKV2D-26A0A0A0MRZ7 120 aa16.56■□□□□ 0.24
SSU72-201ENST00000291386 NKAPP1Q8N9T2 125 aa16.56■□□□□ 0.24
SSU72-201ENST00000291386 C1orf137Q5JT78 98 aa16.55■□□□□ 0.24
SSU72-201ENST00000291386 LINC00167Q96N53 147 aa16.55■□□□□ 0.24
SSU72-201ENST00000291386 A0A0J9YXY3 114 aa16.54■□□□□ 0.24
SSU72-201ENST00000291386 SRSF9Q13242 221 aaKnown RBP eCLIP16.54■□□□□ 0.24
SSU72-201ENST00000291386 LOC107984156A0A0G2JMH3 177 aa16.53■□□□□ 0.24
SSU72-201ENST00000291386 ARL17AQ8IVW1 177 aa16.53■□□□□ 0.24
SSU72-201ENST00000291386 ATOH7Q8N100 152 aa16.53■□□□□ 0.24
SSU72-201ENST00000291386 Q8NDZ9 215 aa16.53■□□□□ 0.24
SSU72-201ENST00000291386 MYCBP2O75592 4640 aa16.53■□□□□ 0.24
SSU72-201ENST00000291386 SPINK6Q6UWN8 80 aa16.52■□□□□ 0.24
SSU72-201ENST00000291386 ANKRD39Q53RE8 183 aa16.51■□□□□ 0.23
SSU72-201ENST00000291386 IGLV7-43P04211 117 aa16.49■□□□□ 0.23
SSU72-201ENST00000291386 ZNF815PA8K554 130 aa16.48■□□□□ 0.23
SSU72-201ENST00000291386 KRTAP29-1A8MX34 341 aaPredicted RBP16.48■□□□□ 0.23
SSU72-201ENST00000291386 GAGE10A6NGK3 116 aa16.47■□□□□ 0.23
SSU72-201ENST00000291386 TIMM17BO60830 172 aa16.47■□□□□ 0.23
SSU72-201ENST00000291386 BOD1L2Q8IYS8 172 aa16.47■□□□□ 0.23
SSU72-201ENST00000291386 DAND5Q8N907 189 aa16.47■□□□□ 0.23
SSU72-201ENST00000291386 TTTY13Q9BZ97 58 aa16.47■□□□□ 0.23
SSU72-201ENST00000291386 RPL37AP8A6NKH3 93 aa16.46■□□□□ 0.23
SSU72-201ENST00000291386 OXTP01178 125 aa16.45■□□□□ 0.22
SSU72-201ENST00000291386 ADAMTSL4-AS1Q5T5F5 129 aa16.45■□□□□ 0.22
SSU72-201ENST00000291386 FAT3Q8TDW7 4589 aa16.45■□□□□ 0.22
SSU72-201ENST00000291386 IGLV1-50A0A075B6I6 118 aa16.44■□□□□ 0.22
SSU72-201ENST00000291386 LITAFQ99732 161 aa16.44■□□□□ 0.22
SSU72-201ENST00000291386 M0R378 163 aa16.43■□□□□ 0.22
SSU72-201ENST00000291386 LRP1Q07954 4544 aaKnown RBP16.42■□□□□ 0.22
SSU72-201ENST00000291386 SCGB1D1O95968 90 aa16.4■□□□□ 0.22
SSU72-201ENST00000291386 MIEN1Q9BRT3 115 aa16.4■□□□□ 0.22
SSU72-201ENST00000291386 IGKV2-28A0A075B6P5 120 aa16.39■□□□□ 0.21
SSU72-201ENST00000291386 HSBP1L1C9JCN9 74 aa16.39■□□□□ 0.21
SSU72-201ENST00000291386 BCE1O60756 84 aa16.39■□□□□ 0.21
SSU72-201ENST00000291386 IGKV2D-28P01615 120 aa16.39■□□□□ 0.21
SSU72-201ENST00000291386 NDUFC2O95298 119 aa16.38■□□□□ 0.21
SSU72-201ENST00000291386 SOSTDC1Q6X4U4 206 aa16.38■□□□□ 0.21
SSU72-201ENST00000291386 PCP2Q8IVA1 136 aa16.38■□□□□ 0.21
SSU72-201ENST00000291386 ZNF861PO60384 105 aa16.36■□□□□ 0.21
SSU72-201ENST00000291386 TRBV10-2A0A0K0K1G8 114 aa16.35■□□□□ 0.21
SSU72-201ENST00000291386 REG3GQ6UW15 175 aa16.35■□□□□ 0.21
SSU72-201ENST00000291386 SCGB1D4Q6XE38 83 aa16.35■□□□□ 0.21
SSU72-201ENST00000291386 DIRC1Q969H9 104 aa16.35■□□□□ 0.21
SSU72-201ENST00000291386 NCR3O14931 201 aa16.34■□□□□ 0.21
SSU72-201ENST00000291386 EIF4EBP3O60516 100 aaPredicted RBP16.34■□□□□ 0.21
SSU72-201ENST00000291386 LINC00308Q8TCZ7 52 aa16.34■□□□□ 0.21
SSU72-201ENST00000291386 TMEM126AQ9H061 195 aa16.33■□□□□ 0.2
SSU72-201ENST00000291386 SPANXB1Q9NS25 103 aaPredicted RBP16.33■□□□□ 0.2
SSU72-201ENST00000291386 TMEM238C9JI98 176 aa16.32■□□□□ 0.2
SSU72-201ENST00000291386 H0Y9J4 135 aa16.32■□□□□ 0.2
SSU72-201ENST00000291386 NPC2P61916 151 aa16.32■□□□□ 0.2
SSU72-201ENST00000291386 SPANXDQ9BXN6 97 aa16.32■□□□□ 0.2
SSU72-201ENST00000291386 SPANXCQ9NY87 97 aa16.32■□□□□ 0.2
SSU72-201ENST00000291386 J3QL48 77 aa16.3■□□□□ 0.2
SSU72-201ENST00000291386 RPL28P46779 137 aaKnown RBP16.3■□□□□ 0.2
SSU72-201ENST00000291386 DMBT1Q9UGM3 2413 aaPredicted RBP16.3■□□□□ 0.2
SSU72-201ENST00000291386 JOSD1Q15040 202 aaPredicted RBP16.29■□□□□ 0.2
SSU72-201ENST00000291386 KRTAP13-1Q8IUC0 172 aa16.29■□□□□ 0.2
SSU72-201ENST00000291386 LINC01600Q96MT4 127 aa16.29■□□□□ 0.2
SSU72-201ENST00000291386 TMA7Q9Y2S6 64 aaKnown RBP16.29■□□□□ 0.2
SSU72-201ENST00000291386 Q6ZVH6 145 aa16.28■□□□□ 0.2
SSU72-201ENST00000291386 PPDPFQ9H3Y8 114 aa16.28■□□□□ 0.2
SSU72-201ENST00000291386 KCNQ1DNQ9H478 68 aa16.28■□□□□ 0.2
SSU72-201ENST00000291386 TRBV10-3A0A0K0K1G6 114 aa16.27■□□□□ 0.2
SSU72-201ENST00000291386 PRYO14603 147 aa16.27■□□□□ 0.2
SSU72-201ENST00000291386 IFITM1P13164 125 aa16.25■□□□□ 0.19
SSU72-201ENST00000291386 DDTP30046 118 aa16.24■□□□□ 0.19
SSU72-201ENST00000291386 SPRR1AP35321 89 aa16.24■□□□□ 0.19
SSU72-201ENST00000291386 UBE2AP49459 152 aa16.24■□□□□ 0.19
SSU72-201ENST00000291386 COPS9Q8WXC6 57 aa16.24■□□□□ 0.19
SSU72-201ENST00000291386 IGLV6-57P01721 117 aa16.23■□□□□ 0.19
SSU72-201ENST00000291386 MT1HL1P0DM35 61 aa16.23■□□□□ 0.19
SSU72-201ENST00000291386 FAM19A1Q7Z5A9 133 aa16.22■□□□□ 0.19
SSU72-201ENST00000291386 S100A12P80511 92 aa16.21■□□□□ 0.19
SSU72-201ENST00000291386 COX8AP10176 69 aa16.2■□□□□ 0.18
SSU72-201ENST00000291386 S100A7L2Q5SY68 101 aa16.2■□□□□ 0.18
SSU72-201ENST00000291386 LINC00337Q8N6G1 96 aa16.2■□□□□ 0.18
SSU72-201ENST00000291386 KRTAP4-16G5E9R7 235 aaPredicted RBP16.18■□□□□ 0.18
SSU72-201ENST00000291386 DLEU1O43261 78 aa16.18■□□□□ 0.18
SSU72-201ENST00000291386 KRTAP1-4P0C5Y4 121 aa16.18■□□□□ 0.18
SSU72-201ENST00000291386 PRLHP81277 87 aa16.18■□□□□ 0.18
SSU72-201ENST00000291386 LINC00518Q8N0U6 118 aa16.18■□□□□ 0.18
SSU72-201ENST00000291386 KRTAP10-8P60410 259 aa16.16■□□□□ 0.18
SSU72-201ENST00000291386 MUSTN1Q8IVN3 82 aa16.16■□□□□ 0.18
SSU72-201ENST00000291386 VAMP8Q9BV40 100 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms