RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 KRTAP10-3P60369 221 aa13.78□□□□□ -0.2
TMED4-201ENST00000289577 NDUFC2-KCTD14E9PQ53 114 aa13.76□□□□□ -0.21
TMED4-201ENST00000289577 DSCR8Q96T75 97 aa13.76□□□□□ -0.21
TMED4-201ENST00000289577 CYSRT1A8MQ03 144 aa13.75□□□□□ -0.21
TMED4-201ENST00000289577 BCE1O60756 84 aa13.75□□□□□ -0.21
TMED4-201ENST00000289577 OXTP01178 125 aa13.75□□□□□ -0.21
TMED4-201ENST00000289577 LAMTOR3Q9UHA4 124 aa13.75□□□□□ -0.21
TMED4-201ENST00000289577 H3BQ85 93 aa13.74□□□□□ -0.21
TMED4-201ENST00000289577 M0R2N4 97 aa13.74□□□□□ -0.21
TMED4-201ENST00000289577 DEFB4AO15263 64 aa13.74□□□□□ -0.21
TMED4-201ENST00000289577 C9orf66Q5T8R8 295 aa13.73□□□□□ -0.21
TMED4-201ENST00000289577 GVQW2A0A096LPI5 108 aaPredicted RBP13.72□□□□□ -0.21
TMED4-201ENST00000289577 PDE6GP18545 87 aa13.72□□□□□ -0.21
TMED4-201ENST00000289577 LINC01547P58512 204 aaPredicted RBP13.72□□□□□ -0.21
TMED4-201ENST00000289577 DAD1P61803 113 aa13.72□□□□□ -0.21
TMED4-201ENST00000289577 Q6ZQY7 126 aa13.72□□□□□ -0.21
TMED4-201ENST00000289577 PRR34Q9NV39 138 aa13.72□□□□□ -0.21
TMED4-201ENST00000289577 DEFB135Q30KP9 77 aa13.71□□□□□ -0.21
TMED4-201ENST00000289577 C5orf47Q569G3 176 aa13.71□□□□□ -0.21
TMED4-201ENST00000289577 Q6ZVQ6 151 aa13.71□□□□□ -0.21
TMED4-201ENST00000289577 LELP1Q5T871 98 aa13.71□□□□□ -0.22
TMED4-201ENST00000289577 SPATA3Q8NHX4 192 aa13.7□□□□□ -0.22
TMED4-201ENST00000289577 GCN1Q92616 2671 aaKnown RBP13.7□□□□□ -0.22
TMED4-201ENST00000289577 C20orf197Q8N268 126 aa13.69□□□□□ -0.22
TMED4-201ENST00000289577 TRAV7A0A075B6U4 112 aa13.68□□□□□ -0.22
TMED4-201ENST00000289577 CELA1Q9UNI1 258 aa13.68□□□□□ -0.22
TMED4-201ENST00000289577 NBEAL2Q6ZNJ1 2754 aa13.67□□□□□ -0.22
TMED4-201ENST00000289577 CXCL6P80162 114 aa13.67□□□□□ -0.22
TMED4-201ENST00000289577 MTORP42345 2549 aa13.67□□□□□ -0.22
TMED4-201ENST00000289577 ACANP16112 2415 aa13.66□□□□□ -0.22
TMED4-201ENST00000289577 DIRC1Q969H9 104 aa13.66□□□□□ -0.22
TMED4-201ENST00000289577 C6orf48Q9UBA6 75 aa13.66□□□□□ -0.22
TMED4-201ENST00000289577 HAMPP81172 84 aa13.66□□□□□ -0.22
TMED4-201ENST00000289577 Q8NAQ8 132 aa13.66□□□□□ -0.22
TMED4-201ENST00000289577 KLK12Q9UKR0 248 aa13.66□□□□□ -0.22
TMED4-201ENST00000289577 APOC4P55056 127 aa13.65□□□□□ -0.22
TMED4-201ENST00000289577 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.65□□□□□ -0.22
TMED4-201ENST00000289577 TRBV7-4A0A0J9YYF1 115 aa13.63□□□□□ -0.23
TMED4-201ENST00000289577 PDZD2O15018 2839 aa13.63□□□□□ -0.23
TMED4-201ENST00000289577 ZNF73O43830 326 aaPredicted RBP13.62□□□□□ -0.23
TMED4-201ENST00000289577 TRAV10A0A0B4J240 114 aa13.62□□□□□ -0.23
TMED4-201ENST00000289577 MIFP14174 115 aa13.62□□□□□ -0.23
TMED4-201ENST00000289577 XAGE1AQ9HD64 81 aa13.62□□□□□ -0.23
TMED4-201ENST00000289577 TRBV7-6A0A0J9YX20 115 aa13.61□□□□□ -0.23
TMED4-201ENST00000289577 COX7BP24311 80 aa13.61□□□□□ -0.23
TMED4-201ENST00000289577 H7BZZ5 65 aa13.6□□□□□ -0.23
TMED4-201ENST00000289577 ELOF1P60002 83 aaKnown RBP13.6□□□□□ -0.23
TMED4-201ENST00000289577 SPART-AS1P0CW21 52 aa13.6□□□□□ -0.23
TMED4-201ENST00000289577 Q5XG85 94 aa13.6□□□□□ -0.23
TMED4-201ENST00000289577 FAM236DA0A1B0GTK5 79 aa13.59□□□□□ -0.23
TMED4-201ENST00000289577 FAM236CP0DP71 79 aa13.59□□□□□ -0.23
TMED4-201ENST00000289577 KLKP1Q107X0 134 aa13.59□□□□□ -0.23
TMED4-201ENST00000289577 HTN3P15516 51 aa13.59□□□□□ -0.23
TMED4-201ENST00000289577 EPM2AB3EWF7 344 aa13.56□□□□□ -0.24
TMED4-201ENST00000289577 VPREB1P12018 145 aa13.56□□□□□ -0.24
TMED4-201ENST00000289577 C4orf26Q17RF5 130 aa13.54□□□□□ -0.24
TMED4-201ENST00000289577 M0R378 163 aa13.51□□□□□ -0.25
TMED4-201ENST00000289577 SERP1Q9Y6X1 66 aa13.51□□□□□ -0.25
TMED4-201ENST00000289577 EGFEM1PQ0D2K5 195 aa13.51□□□□□ -0.25
TMED4-201ENST00000289577 KRTAP26-1Q6PEX3 210 aa13.5□□□□□ -0.25
TMED4-201ENST00000289577 LINC00528Q8N1L1 170 aa13.5□□□□□ -0.25
TMED4-201ENST00000289577 CAMK2N2Q96S95 79 aa13.5□□□□□ -0.25
TMED4-201ENST00000289577 SMR3AQ99954 134 aa13.5□□□□□ -0.25
TMED4-201ENST00000289577 VWFP04275 2813 aa13.49□□□□□ -0.25
TMED4-201ENST00000289577 HIGD2BQ4VC39 106 aa13.49□□□□□ -0.25
TMED4-201ENST00000289577 SCXQ7RTU7 201 aa13.49□□□□□ -0.25
TMED4-201ENST00000289577 RMI2Q96E14 147 aa13.48□□□□□ -0.25
TMED4-201ENST00000289577 SNURFQ9Y675 71 aa13.48□□□□□ -0.25
TMED4-201ENST00000289577 WIPF1O43516 503 aa13.48□□□□□ -0.25
TMED4-201ENST00000289577 HIVEP2P31629 2446 aa13.48□□□□□ -0.25
TMED4-201ENST00000289577 Q6ZRU5 148 aa13.46□□□□□ -0.25
TMED4-201ENST00000289577 TM2D3Q9BRN9 247 aa13.46□□□□□ -0.25
TMED4-201ENST00000289577 HRCT1Q6UXD1 115 aa13.45□□□□□ -0.26
TMED4-201ENST00000289577 WFDC10BQ8IUB3 73 aa13.44□□□□□ -0.26
TMED4-201ENST00000289577 C15orf56Q8N910 161 aa13.44□□□□□ -0.26
TMED4-201ENST00000289577 TENM4Q6N022 2769 aa13.44□□□□□ -0.26
TMED4-201ENST00000289577 F8WEM9 126 aa13.43□□□□□ -0.26
TMED4-201ENST00000289577 NDUFC1O43677 76 aa13.43□□□□□ -0.26
TMED4-201ENST00000289577 H3BNG1 76 aa13.4□□□□□ -0.26
TMED4-201ENST00000289577 NREPQ16612 68 aa13.4□□□□□ -0.26
TMED4-201ENST00000289577 ITPR2Q14571 2701 aa13.4□□□□□ -0.26
TMED4-201ENST00000289577 BPY2O14599 106 aa13.39□□□□□ -0.27
TMED4-201ENST00000289577 ERC2-IT1O76042 136 aa13.39□□□□□ -0.27
TMED4-201ENST00000289577 IGKV4-1P06312 121 aa13.37□□□□□ -0.27
TMED4-201ENST00000289577 KPRPQ5T749 579 aaPredicted RBP13.37□□□□□ -0.27
TMED4-201ENST00000289577 Q6ZRP5 223 aa13.37□□□□□ -0.27
TMED4-201ENST00000289577 F8WDY8 70 aa13.35□□□□□ -0.27
TMED4-201ENST00000289577 Q8N9L7 120 aa13.34□□□□□ -0.27
TMED4-201ENST00000289577 KCNQ1DNQ9H478 68 aa13.34□□□□□ -0.27
TMED4-201ENST00000289577 ATP5EP56381 51 aaPredicted RBP13.33□□□□□ -0.27
TMED4-201ENST00000289577 TMEM254Q8TBM7 123 aa13.33□□□□□ -0.27
TMED4-201ENST00000289577 SMIM26A0A096LP01 95 aa13.32□□□□□ -0.28
TMED4-201ENST00000289577 OCR1Q9BZK8 76 aa13.32□□□□□ -0.28
TMED4-201ENST00000289577 Q8N377 158 aa13.31□□□□□ -0.28
TMED4-201ENST00000289577 C1orf43Q9BWL3 253 aa13.31□□□□□ -0.28
TMED4-201ENST00000289577 IGLV5-48A0A075B6I7 105 aa13.3□□□□□ -0.28
TMED4-201ENST00000289577 HIVEP1P15822 2718 aa13.3□□□□□ -0.28
TMED4-201ENST00000289577 ESRGQ1W209 222 aa13.29□□□□□ -0.28
TMED4-201ENST00000289577 SYCNQ0VAF6 134 aa13.29□□□□□ -0.28
TMED4-201ENST00000289577 FP248Q71RG6 208 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms