RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CYP4F30PQ9H0H9 118 aa12.18□□□□□ -0.46
PCDHA13-201ENST00000289272 COL27A1Q8IZC6 1860 aaPredicted RBP12.17□□□□□ -0.46
PCDHA13-201ENST00000289272 Q9BRP9 147 aa12.16□□□□□ -0.46
PCDHA13-201ENST00000289272 SETD2Q9BYW2 2564 aaPredicted RBP12.16□□□□□ -0.46
PCDHA13-201ENST00000289272 SPINK6Q6UWN8 80 aa12.16□□□□□ -0.46
PCDHA13-201ENST00000289272 DOPEY1Q5JWR5 2465 aa12.15□□□□□ -0.46
PCDHA13-201ENST00000289272 A0A087WSZ3 146 aa12.15□□□□□ -0.46
PCDHA13-201ENST00000289272 M0R2N4 97 aa12.15□□□□□ -0.46
PCDHA13-201ENST00000289272 Q6ZTC4 211 aa12.14□□□□□ -0.47
PCDHA13-201ENST00000289272 TM2D3Q9BRN9 247 aa12.11□□□□□ -0.47
PCDHA13-201ENST00000289272 Q8NBF4 154 aa12.1□□□□□ -0.47
PCDHA13-201ENST00000289272 KIAA0087Q14695 138 aa12.09□□□□□ -0.47
PCDHA13-201ENST00000289272 FN1P02751 2386 aaKnown RBP12.09□□□□□ -0.47
PCDHA13-201ENST00000289272 GVQW2A0A096LPI5 108 aaPredicted RBP12.09□□□□□ -0.47
PCDHA13-201ENST00000289272 JMJD1CQ15652 2540 aa12.08□□□□□ -0.48
PCDHA13-201ENST00000289272 PCOTHQ58A44 107 aa12.08□□□□□ -0.48
PCDHA13-201ENST00000289272 LYPD5Q6UWN5 251 aa12.08□□□□□ -0.48
PCDHA13-201ENST00000289272 PCNTO95613 3336 aa12.07□□□□□ -0.48
PCDHA13-201ENST00000289272 IGLV9-49A0A0B4J1Y8 123 aa12.07□□□□□ -0.48
PCDHA13-201ENST00000289272 A8MTW9 85 aa12.07□□□□□ -0.48
PCDHA13-201ENST00000289272 Q6ZRU5 148 aa12.07□□□□□ -0.48
PCDHA13-201ENST00000289272 CD164Q04900 197 aa12.06□□□□□ -0.48
PCDHA13-201ENST00000289272 PRRC2CQ9Y520 2896 aaKnown RBP12.04□□□□□ -0.48
PCDHA13-201ENST00000289272 CHD7Q9P2D1 2997 aa12.04□□□□□ -0.48
PCDHA13-201ENST00000289272 IGHV6-1A0A0B4J1U7 121 aa12.04□□□□□ -0.48
PCDHA13-201ENST00000289272 BPTFQ12830 3046 aa12.04□□□□□ -0.48
PCDHA13-201ENST00000289272 ACYP2P14621 99 aa12.04□□□□□ -0.48
PCDHA13-201ENST00000289272 ZFYVE26Q68DK2 2539 aa12.04□□□□□ -0.48
PCDHA13-201ENST00000289272 LRRK2Q5S007 2527 aa12.03□□□□□ -0.48
PCDHA13-201ENST00000289272 ZNF462Q96JM2 2506 aa12.03□□□□□ -0.48
PCDHA13-201ENST00000289272 IGLV6-57P01721 117 aa12.02□□□□□ -0.49
PCDHA13-201ENST00000289272 H3BNG1 76 aa12.02□□□□□ -0.49
PCDHA13-201ENST00000289272 H7BZZ5 65 aa12.01□□□□□ -0.49
PCDHA13-201ENST00000289272 IGLV5-52A0A0A0MRZ9 124 aa12.01□□□□□ -0.49
PCDHA13-201ENST00000289272 VPREB1P12018 145 aa12.01□□□□□ -0.49
PCDHA13-201ENST00000289272 TRBV7-4A0A0J9YYF1 115 aa12.01□□□□□ -0.49
PCDHA13-201ENST00000289272 FSHBP01225 129 aa12□□□□□ -0.49
PCDHA13-201ENST00000289272 C6orf48Q9UBA6 75 aa12□□□□□ -0.49
PCDHA13-201ENST00000289272 C1orf134Q5TEV5 83 aa12□□□□□ -0.49
PCDHA13-201ENST00000289272 Q9UF83 564 aa11.99□□□□□ -0.49
PCDHA13-201ENST00000289272 A0A1B0GU69 56 aa11.98□□□□□ -0.49
PCDHA13-201ENST00000289272 TRAV22A0A0B4J277 110 aa11.98□□□□□ -0.49
PCDHA13-201ENST00000289272 LINC00167Q96N53 147 aa11.98□□□□□ -0.49
PCDHA13-201ENST00000289272 C22orf24Q9Y442 160 aa11.98□□□□□ -0.49
PCDHA13-201ENST00000289272 SPAG11AQ6PDA7 123 aa11.97□□□□□ -0.49
PCDHA13-201ENST00000289272 Q6ZRX8 168 aa11.97□□□□□ -0.49
PCDHA13-201ENST00000289272 LINC00336Q6ZUF6 198 aa11.97□□□□□ -0.49
PCDHA13-201ENST00000289272 C8orf87E5RJ46 101 aa11.97□□□□□ -0.49
PCDHA13-201ENST00000289272 PKD1L2Q7Z442 2459 aa11.97□□□□□ -0.49
PCDHA13-201ENST00000289272 POLQO75417 2590 aa11.96□□□□□ -0.5
PCDHA13-201ENST00000289272 LINC01556Q5JQF7 62 aa11.95□□□□□ -0.5
PCDHA13-201ENST00000289272 MTORP42345 2549 aa11.95□□□□□ -0.5
PCDHA13-201ENST00000289272 ANKRD17O75179 2603 aaKnown RBP11.93□□□□□ -0.5
PCDHA13-201ENST00000289272 ATP11AUNQ6ZP68 121 aa11.93□□□□□ -0.5
PCDHA13-201ENST00000289272 SERTAD4-AS1Q5TG53 156 aa11.92□□□□□ -0.5
PCDHA13-201ENST00000289272 OBSCN-AS1Q96MR7 158 aa11.92□□□□□ -0.5
PCDHA13-201ENST00000289272 HTTP42858 3142 aa11.92□□□□□ -0.5
PCDHA13-201ENST00000289272 MOBPQ13875 183 aa11.91□□□□□ -0.5
PCDHA13-201ENST00000289272 CHD9Q3L8U1 2897 aa11.89□□□□□ -0.51
PCDHA13-201ENST00000289272 DEFB116Q30KQ4 102 aa11.89□□□□□ -0.51
PCDHA13-201ENST00000289272 PRR15Q8IV56 129 aa11.88□□□□□ -0.51
PCDHA13-201ENST00000289272 C5orf42Q9H799 3197 aa11.88□□□□□ -0.51
PCDHA13-201ENST00000289272 LINC00476Q8WZB0 136 aa11.88□□□□□ -0.51
PCDHA13-201ENST00000289272 MUC4Q99102 2169 aa11.88□□□□□ -0.51
PCDHA13-201ENST00000289272 LOC101927531A0A1B0GV80 90 aa11.88□□□□□ -0.51
PCDHA13-201ENST00000289272 CIRBP-AS1Q8TBR5 109 aa11.88□□□□□ -0.51
PCDHA13-201ENST00000289272 KTN1-AS1Q86SY8 53 aa11.87□□□□□ -0.51
PCDHA13-201ENST00000289272 X6R8D5 127 aa11.86□□□□□ -0.51
PCDHA13-201ENST00000289272 RETNLBQ9BQ08 111 aa11.86□□□□□ -0.51
PCDHA13-201ENST00000289272 KRTAP24-1Q3LI83 254 aa11.85□□□□□ -0.51
PCDHA13-201ENST00000289272 A8MUN3 132 aa11.85□□□□□ -0.51
PCDHA13-201ENST00000289272 A8MWP4 228 aa11.83□□□□□ -0.52
PCDHA13-201ENST00000289272 EIF4EBP3O60516 100 aaPredicted RBP11.82□□□□□ -0.52
PCDHA13-201ENST00000289272 SPANXA2-OT1Q8N9U9 137 aa11.82□□□□□ -0.52
PCDHA13-201ENST00000289272 PRLHP81277 87 aa11.82□□□□□ -0.52
PCDHA13-201ENST00000289272 COA5Q86WW8 74 aa11.82□□□□□ -0.52
PCDHA13-201ENST00000289272 LINC00528Q8N1L1 170 aa11.82□□□□□ -0.52
PCDHA13-201ENST00000289272 C7orf65Q6ZTY9 151 aa11.82□□□□□ -0.52
PCDHA13-201ENST00000289272 KCNQ1DNQ9H478 68 aa11.81□□□□□ -0.52
PCDHA13-201ENST00000289272 MDFIQ99750 246 aa11.79□□□□□ -0.52
PCDHA13-201ENST00000289272 ACANP16112 2415 aa11.79□□□□□ -0.52
PCDHA13-201ENST00000289272 Q6ZRP5 223 aa11.77□□□□□ -0.52
PCDHA13-201ENST00000289272 LCA10Q71F78 164 aa11.77□□□□□ -0.53
PCDHA13-201ENST00000289272 Q1T7F1 81 aa11.76□□□□□ -0.53
PCDHA13-201ENST00000289272 K7EQZ3 153 aa11.75□□□□□ -0.53
PCDHA13-201ENST00000289272 Q8NAQ8 132 aa11.75□□□□□ -0.53
PCDHA13-201ENST00000289272 A0A096LNT2 108 aa11.73□□□□□ -0.53
PCDHA13-201ENST00000289272 PLA2G2DQ9UNK4 145 aa11.7□□□□□ -0.54
PCDHA13-201ENST00000289272 UQCR11O14957 56 aa11.7□□□□□ -0.54
PCDHA13-201ENST00000289272 TRANK1O15050 2925 aa11.69□□□□□ -0.54
PCDHA13-201ENST00000289272 C16orf90A8MZG2 172 aa11.69□□□□□ -0.54
PCDHA13-201ENST00000289272 CSNK1G2-AS1Q8NCQ2 148 aa11.68□□□□□ -0.54
PCDHA13-201ENST00000289272 IGLV1-50A0A075B6I6 118 aa11.67□□□□□ -0.54
PCDHA13-201ENST00000289272 CDC42SE1Q9NRR8 79 aa11.66□□□□□ -0.54
PCDHA13-201ENST00000289272 MRPL34Q9BQ48 92 aaKnown RBP11.66□□□□□ -0.54
PCDHA13-201ENST00000289272 PRR34Q9NV39 138 aa11.66□□□□□ -0.54
PCDHA13-201ENST00000289272 FAM229AH3BQW9 127 aa11.66□□□□□ -0.54
PCDHA13-201ENST00000289272 NBDYA0A0U1RRE5 68 aa11.66□□□□□ -0.54
PCDHA13-201ENST00000289272 ST20-AS1Q8NBB2 130 aa11.66□□□□□ -0.54
PCDHA13-201ENST00000289272 EPG5Q9HCE0 2579 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms