RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 VPREB1P12018 145 aa8.21□□□□□ -1.1
TPM1-202ENST00000288398 KRTAP13-2Q52LG2 175 aa8.21□□□□□ -1.1
TPM1-202ENST00000288398 BAGE3Q86Y29 109 aa8.21□□□□□ -1.1
TPM1-202ENST00000288398 LINC00158P58513 81 aa8.2□□□□□ -1.1
TPM1-202ENST00000288398 RETNLBQ9BQ08 111 aa8.2□□□□□ -1.1
TPM1-202ENST00000288398 CDIP1Q9H305 208 aa8.2□□□□□ -1.1
TPM1-202ENST00000288398 PMCHL1Q16048 86 aa8.19□□□□□ -1.1
TPM1-202ENST00000288398 C18orf32Q8TCD1 76 aa8.19□□□□□ -1.1
TPM1-202ENST00000288398 HIGD2AQ9BW72 106 aa8.19□□□□□ -1.1
TPM1-202ENST00000288398 C11orf86A6NJI1 115 aa8.18□□□□□ -1.1
TPM1-202ENST00000288398 A0A096LNJ9 63 aa8.17□□□□□ -1.1
TPM1-202ENST00000288398 M0R378 163 aa8.17□□□□□ -1.1
TPM1-202ENST00000288398 CTAG1AP78358 180 aa8.17□□□□□ -1.1
TPM1-202ENST00000288398 CHTOPQ9Y3Y2 248 aaKnown RBP8.17□□□□□ -1.1
TPM1-202ENST00000288398 ZNF706Q9Y5V0 76 aaPredicted RBP8.17□□□□□ -1.1
TPM1-202ENST00000288398 IGLV7-46A0A075B6I9 117 aa8.16□□□□□ -1.1
TPM1-202ENST00000288398 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
TPM1-202ENST00000288398 A0A0U1RRA0 63 aa8.15□□□□□ -1.1
TPM1-202ENST00000288398 PLEKHB2Q96CS7 222 aa8.15□□□□□ -1.1
TPM1-202ENST00000288398 S100A12P80511 92 aa8.14□□□□□ -1.11
TPM1-202ENST00000288398 MEIG1Q5JSS6 88 aa8.14□□□□□ -1.11
TPM1-202ENST00000288398 SPAG11AQ6PDA7 123 aa8.14□□□□□ -1.11
TPM1-202ENST00000288398 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
TPM1-202ENST00000288398 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
TPM1-202ENST00000288398 MUC2Q02817 5179 aa8.13□□□□□ -1.11
TPM1-202ENST00000288398 BOD1L2Q8IYS8 172 aa8.12□□□□□ -1.11
TPM1-202ENST00000288398 C3orf22Q8N5N4 141 aa8.12□□□□□ -1.11
TPM1-202ENST00000288398 TMEM223A0PJW6 202 aa8.11□□□□□ -1.11
TPM1-202ENST00000288398 LINC00587B1AMM8 73 aa8.11□□□□□ -1.11
TPM1-202ENST00000288398 PRYO14603 147 aa8.11□□□□□ -1.11
TPM1-202ENST00000288398 COA6Q5JTJ3 125 aaKnown RBP8.11□□□□□ -1.11
TPM1-202ENST00000288398 Q8NDZ9 215 aa8.11□□□□□ -1.11
TPM1-202ENST00000288398 TRAV12-1A0A0B4J245 112 aa8.1□□□□□ -1.11
TPM1-202ENST00000288398 ETDCA0A1B0GVM5 59 aa8.1□□□□□ -1.11
TPM1-202ENST00000288398 SMIM13P0DJ93 91 aa8.1□□□□□ -1.11
TPM1-202ENST00000288398 HERV-K104P63124 156 aa8.1□□□□□ -1.11
TPM1-202ENST00000288398 IFI27L1Q96BM0 104 aa8.1□□□□□ -1.11
TPM1-202ENST00000288398 CHCHD1Q96BP2 118 aaKnown RBP8.1□□□□□ -1.11
TPM1-202ENST00000288398 SPRR4Q96PI1 79 aa8.1□□□□□ -1.11
TPM1-202ENST00000288398 MAP1LC3CQ9BXW4 147 aa8.1□□□□□ -1.11
TPM1-202ENST00000288398 PPDPFQ9H3Y8 114 aa8.1□□□□□ -1.11
TPM1-202ENST00000288398 NCR3O14931 201 aa8.09□□□□□ -1.11
TPM1-202ENST00000288398 TRGC2P03986 189 aa8.09□□□□□ -1.11
TPM1-202ENST00000288398 C5orf52A6NGY3 159 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST1H2BKO60814 126 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST1H2BJP06899 126 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST1H2BOP23527 126 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST1H2BBP33778 126 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST1H2BDP58876 126 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST1H2BCP62807 126 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST2H2BEQ16778 126 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.08□□□□□ -1.12
TPM1-202ENST00000288398 MIR7-3HGQ8N6C7 128 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 LINC00337Q8N6G1 96 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST1H2BHQ93079 126 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST1H2BNQ99877 126 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 HIST1H2BMQ99879 126 aa8.08□□□□□ -1.12
TPM1-202ENST00000288398 LOC105371267A0A1B0GV96 52 aa8.07□□□□□ -1.12
TPM1-202ENST00000288398 MYMXA0A1B0GTQ4 84 aa8.06□□□□□ -1.12
TPM1-202ENST00000288398 H0Y8G0 127 aa8.06□□□□□ -1.12
TPM1-202ENST00000288398 HSBP1O75506 76 aa8.06□□□□□ -1.12
TPM1-202ENST00000288398 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
TPM1-202ENST00000288398 NDUFA12Q9UI09 145 aa8.06□□□□□ -1.12
TPM1-202ENST00000288398 TMA7Q9Y2S6 64 aaKnown RBP8.06□□□□□ -1.12
TPM1-202ENST00000288398 Q8NBF4 154 aa8.05□□□□□ -1.12
TPM1-202ENST00000288398 SMCR5Q8TEV8 140 aa8.05□□□□□ -1.12
TPM1-202ENST00000288398 DAND5Q8N907 189 aa8.04□□□□□ -1.12
TPM1-202ENST00000288398 KCNQ1DNQ9H478 68 aa8.04□□□□□ -1.12
TPM1-202ENST00000288398 MIEN1Q9BRT3 115 aa8.03□□□□□ -1.12
TPM1-202ENST00000288398 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.13
TPM1-202ENST00000288398 SPINK1P00995 79 aa8.02□□□□□ -1.13
TPM1-202ENST00000288398 S100A6P06703 90 aa8.01□□□□□ -1.13
TPM1-202ENST00000288398 SPRR1AP35321 89 aa8.01□□□□□ -1.13
TPM1-202ENST00000288398 HERVK_113P61574 105 aa8.01□□□□□ -1.13
TPM1-202ENST00000288398 GAGE2AQ6NT46 116 aa8.01□□□□□ -1.13
TPM1-202ENST00000288398 IGLV9-49A0A0B4J1Y8 123 aa8□□□□□ -1.13
TPM1-202ENST00000288398 DDTP30046 118 aa8□□□□□ -1.13
TPM1-202ENST00000288398 FAM19A2Q8N3H0 131 aa8□□□□□ -1.13
TPM1-202ENST00000288398 A6NJY4 79 aa7.99□□□□□ -1.13
TPM1-202ENST00000288398 LEPROTO15243 131 aa7.99□□□□□ -1.13
TPM1-202ENST00000288398 PLNP26678 52 aa7.99□□□□□ -1.13
TPM1-202ENST00000288398 SNRPEP62304 92 aaKnown RBP7.99□□□□□ -1.13
TPM1-202ENST00000288398 S100A7L2Q5SY68 101 aa7.99□□□□□ -1.13
TPM1-202ENST00000288398 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
TPM1-202ENST00000288398 LEPROTL1O95214 131 aa7.98□□□□□ -1.13
TPM1-202ENST00000288398 LGALS3P17931 250 aaKnown RBP7.98□□□□□ -1.13
TPM1-202ENST00000288398 MOBPQ13875 183 aa7.98□□□□□ -1.13
TPM1-202ENST00000288398 TRBV10-2A0A0K0K1G8 114 aa7.97□□□□□ -1.13
TPM1-202ENST00000288398 B5MCH6 92 aa7.97□□□□□ -1.13
TPM1-202ENST00000288398 LINC00483Q53H64 154 aa7.97□□□□□ -1.13
TPM1-202ENST00000288398 LCE2AQ5TA79 106 aaPredicted RBP7.97□□□□□ -1.13
TPM1-202ENST00000288398 HIST3H2BBQ8N257 126 aa7.97□□□□□ -1.13
TPM1-202ENST00000288398 SPANXB1Q9NS25 103 aaPredicted RBP7.97□□□□□ -1.13
TPM1-202ENST00000288398 HSPB8Q9UJY1 196 aa7.97□□□□□ -1.13
TPM1-202ENST00000288398 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.14
TPM1-202ENST00000288398 NMUP48645 174 aa7.96□□□□□ -1.14
TPM1-202ENST00000288398 JOSD1Q15040 202 aaPredicted RBP7.96□□□□□ -1.14
TPM1-202ENST00000288398 J3QQQ9 107 aa7.95□□□□□ -1.14
TPM1-202ENST00000288398 DPM2O94777 84 aa7.95□□□□□ -1.14
TPM1-202ENST00000288398 LINC00310P59036 64 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms