RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 RETNQ9HD89 108 aa6.64□□□□□ -1.35
HMBOX1-201ENST00000287701 VPS13CQ709C8 3753 aa6.64□□□□□ -1.35
HMBOX1-201ENST00000287701 ANKHD1Q8IWZ3 2542 aaKnown RBP6.64□□□□□ -1.35
HMBOX1-201ENST00000287701 ELOF1P60002 83 aaKnown RBP6.64□□□□□ -1.35
HMBOX1-201ENST00000287701 NOP10Q9NPE3 64 aaKnown RBP6.63□□□□□ -1.35
HMBOX1-201ENST00000287701 PSCAO43653 123 aa6.63□□□□□ -1.35
HMBOX1-201ENST00000287701 SLURP1P55000 103 aa6.63□□□□□ -1.35
HMBOX1-201ENST00000287701 SYCNQ0VAF6 134 aa6.63□□□□□ -1.35
HMBOX1-201ENST00000287701 FLNBO75369 2602 aaKnown RBP6.63□□□□□ -1.35
HMBOX1-201ENST00000287701 A0A0J9YWU9 116 aa6.62□□□□□ -1.35
HMBOX1-201ENST00000287701 ODF3L2Q3SX64 289 aa6.62□□□□□ -1.35
HMBOX1-201ENST00000287701 LINC00588Q9Y4M8 146 aa6.62□□□□□ -1.35
HMBOX1-201ENST00000287701 PTPN13Q12923 2485 aa6.62□□□□□ -1.35
HMBOX1-201ENST00000287701 LINC00612Q8N6U2 182 aa6.61□□□□□ -1.35
HMBOX1-201ENST00000287701 Q8N9L7 120 aa6.61□□□□□ -1.35
HMBOX1-201ENST00000287701 NDUFB1O75438 58 aa6.61□□□□□ -1.35
HMBOX1-201ENST00000287701 NBPF19A0A087WUL8 3843 aa6.6□□□□□ -1.35
HMBOX1-201ENST00000287701 GVQW2A0A096LPI5 108 aaPredicted RBP6.6□□□□□ -1.35
HMBOX1-201ENST00000287701 PSPHP1O15172 72 aa6.6□□□□□ -1.35
HMBOX1-201ENST00000287701 NDUFS5O43920 106 aa6.6□□□□□ -1.35
HMBOX1-201ENST00000287701 MSMBP08118 114 aa6.6□□□□□ -1.35
HMBOX1-201ENST00000287701 UBE2AP49459 152 aa6.6□□□□□ -1.35
HMBOX1-201ENST00000287701 HIGD2BQ4VC39 106 aa6.6□□□□□ -1.35
HMBOX1-201ENST00000287701 LINC01356Q8N9X3 169 aa6.6□□□□□ -1.35
HMBOX1-201ENST00000287701 ZNF73O43830 326 aaPredicted RBP6.59□□□□□ -1.35
HMBOX1-201ENST00000287701 Q5VV11 94 aa6.59□□□□□ -1.35
HMBOX1-201ENST00000287701 C4orf3Q8WVX3 66 aa6.59□□□□□ -1.35
HMBOX1-201ENST00000287701 ZNF702PQ9H963 129 aa6.59□□□□□ -1.35
HMBOX1-201ENST00000287701 ABCA2Q9BZC7 2435 aa6.59□□□□□ -1.35
HMBOX1-201ENST00000287701 SMIM29Q86T20 159 aa6.59□□□□□ -1.35
HMBOX1-201ENST00000287701 ETDCA0A1B0GVM5 59 aa6.59□□□□□ -1.36
HMBOX1-201ENST00000287701 CRYBG3Q68DQ2 2970 aa6.58□□□□□ -1.36
HMBOX1-201ENST00000287701 CMC4P56277 68 aaPredicted RBP6.58□□□□□ -1.36
HMBOX1-201ENST00000287701 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
HMBOX1-201ENST00000287701 RBM12B-AS1Q9P1G2 102 aa6.58□□□□□ -1.36
HMBOX1-201ENST00000287701 HRNRQ86YZ3 2850 aaPredicted RBP6.58□□□□□ -1.36
HMBOX1-201ENST00000287701 PHF5AQ7RTV0 110 aaKnown RBP6.58□□□□□ -1.36
HMBOX1-201ENST00000287701 LINC00269Q8N2A0 174 aa6.58□□□□□ -1.36
HMBOX1-201ENST00000287701 LIMD2Q9BT23 127 aa6.58□□□□□ -1.36
HMBOX1-201ENST00000287701 DEFB112Q30KQ8 113 aa6.57□□□□□ -1.36
HMBOX1-201ENST00000287701 FAM30AQ9NZY2 134 aa6.57□□□□□ -1.36
HMBOX1-201ENST00000287701 SPTAN1Q13813 2472 aaKnown RBP6.57□□□□□ -1.36
HMBOX1-201ENST00000287701 CHCHD10Q8WYQ3 142 aaPredicted RBP6.57□□□□□ -1.36
HMBOX1-201ENST00000287701 LRCOL1A6NCL2 159 aa6.57□□□□□ -1.36
HMBOX1-201ENST00000287701 A8MUN3 132 aa6.57□□□□□ -1.36
HMBOX1-201ENST00000287701 KRTAP21-3Q3LHN1 58 aa6.57□□□□□ -1.36
HMBOX1-201ENST00000287701 ATP11AUNQ6ZP68 121 aa6.57□□□□□ -1.36
HMBOX1-201ENST00000287701 HECTD1Q9ULT8 2610 aa6.56□□□□□ -1.36
HMBOX1-201ENST00000287701 GIG44P09565 113 aaPredicted RBP6.56□□□□□ -1.36
HMBOX1-201ENST00000287701 CSNK1G2-AS1Q8NCQ2 148 aa6.56□□□□□ -1.36
HMBOX1-201ENST00000287701 LINC00528Q8N1L1 170 aa6.56□□□□□ -1.36
HMBOX1-201ENST00000287701 IGLV5-48A0A075B6I7 105 aa6.55□□□□□ -1.36
HMBOX1-201ENST00000287701 M0R378 163 aa6.55□□□□□ -1.36
HMBOX1-201ENST00000287701 FLNCQ14315 2725 aa6.55□□□□□ -1.36
HMBOX1-201ENST00000287701 SORL1Q92673 2214 aa6.55□□□□□ -1.36
HMBOX1-201ENST00000287701 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.55□□□□□ -1.36
HMBOX1-201ENST00000287701 DEFB136Q30KP8 78 aa6.55□□□□□ -1.36
HMBOX1-201ENST00000287701 NAV2Q8IVL1 2488 aa6.55□□□□□ -1.36
HMBOX1-201ENST00000287701 B4DSR2 109 aa6.55□□□□□ -1.36
HMBOX1-201ENST00000287701 C18orf65Q6ZTR6 163 aa6.55□□□□□ -1.36
HMBOX1-201ENST00000287701 C10orf25Q5T742 122 aa6.54□□□□□ -1.36
HMBOX1-201ENST00000287701 NOTCH3Q9UM47 2321 aa6.54□□□□□ -1.36
HMBOX1-201ENST00000287701 SPANXA2-OT1Q8N9U9 137 aa6.54□□□□□ -1.36
HMBOX1-201ENST00000287701 Q9BRP9 147 aa6.54□□□□□ -1.36
HMBOX1-201ENST00000287701 KLK12Q9UKR0 248 aa6.53□□□□□ -1.36
HMBOX1-201ENST00000287701 C16orf90A8MZG2 172 aa6.53□□□□□ -1.36
HMBOX1-201ENST00000287701 SPAG11BQ08648 103 aa6.53□□□□□ -1.36
HMBOX1-201ENST00000287701 UNQ6190/PRO20217Q6UXQ8 127 aa6.53□□□□□ -1.36
HMBOX1-201ENST00000287701 TEX15Q9BXT5 2789 aa6.53□□□□□ -1.36
HMBOX1-201ENST00000287701 A6NN06 94 aa6.52□□□□□ -1.37
HMBOX1-201ENST00000287701 REG3AQ06141 175 aa6.52□□□□□ -1.37
HMBOX1-201ENST00000287701 Q8N9P0 234 aaPredicted RBP6.52□□□□□ -1.37
HMBOX1-201ENST00000287701 CLPSL2Q6UWE3 100 aa6.51□□□□□ -1.37
HMBOX1-201ENST00000287701 Q75L30 129 aa6.51□□□□□ -1.37
HMBOX1-201ENST00000287701 GYPEP15421 78 aa6.51□□□□□ -1.37
HMBOX1-201ENST00000287701 KHDC1LQ5JSQ8 128 aa6.51□□□□□ -1.37
HMBOX1-201ENST00000287701 Q6YL49 198 aa6.51□□□□□ -1.37
HMBOX1-201ENST00000287701 B9D2Q9BPU9 175 aa6.51□□□□□ -1.37
HMBOX1-201ENST00000287701 C2CD3Q4AC94 2353 aa6.51□□□□□ -1.37
HMBOX1-201ENST00000287701 KCNQ1DNQ9H478 68 aa6.51□□□□□ -1.37
HMBOX1-201ENST00000287701 AKAP9Q99996 3911 aa6.5□□□□□ -1.37
HMBOX1-201ENST00000287701 LOC101927531A0A1B0GV80 90 aa6.5□□□□□ -1.37
HMBOX1-201ENST00000287701 VPREB1P12018 145 aa6.5□□□□□ -1.37
HMBOX1-201ENST00000287701 UNC79Q9P2D8 2635 aa6.5□□□□□ -1.37
HMBOX1-201ENST00000287701 C3orf84H3BNL1 204 aa6.5□□□□□ -1.37
HMBOX1-201ENST00000287701 TLN1Q9Y490 2541 aaKnown RBP6.5□□□□□ -1.37
HMBOX1-201ENST00000287701 CR1P17927 2039 aa6.5□□□□□ -1.37
HMBOX1-201ENST00000287701 H3BPC8 53 aa6.49□□□□□ -1.37
HMBOX1-201ENST00000287701 KPRPQ5T749 579 aaPredicted RBP6.49□□□□□ -1.37
HMBOX1-201ENST00000287701 USP9YO00507 2555 aaPredicted RBP6.49□□□□□ -1.37
HMBOX1-201ENST00000287701 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
HMBOX1-201ENST00000287701 SPRR4Q96PI1 79 aa6.49□□□□□ -1.37
HMBOX1-201ENST00000287701 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.48□□□□□ -1.371e-6■■■□□ 14.7
HMBOX1-201ENST00000287701 A8MU10 97 aa6.48□□□□□ -1.37
HMBOX1-201ENST00000287701 HCG22E2RYF7 251 aa6.48□□□□□ -1.37
HMBOX1-201ENST00000287701 DSCR10P59022 87 aa6.48□□□□□ -1.37
HMBOX1-201ENST00000287701 PRO0255Q9UI72 69 aa6.48□□□□□ -1.37
HMBOX1-201ENST00000287701 CREBBPQ92793 2442 aa6.48□□□□□ -1.37
HMBOX1-201ENST00000287701 FSHBP01225 129 aa6.48□□□□□ -1.37
HMBOX1-201ENST00000287701 C6orf48Q9UBA6 75 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms