RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TMEM258P61165 79 aa9.29□□□□□ -0.92
SCAF4-201ENST00000286835 CD164L2Q6UWJ8 174 aa9.28□□□□□ -0.92
SCAF4-201ENST00000286835 CRYGAP11844 174 aa9.28□□□□□ -0.92
SCAF4-201ENST00000286835 LINC01561Q8N1V8 128 aa9.28□□□□□ -0.92
SCAF4-201ENST00000286835 C16orf95Q9H693 158 aa9.28□□□□□ -0.92
SCAF4-201ENST00000286835 NIPBLQ6KC79 2804 aaeCLIP9.28□□□□□ -0.926e-8■■■■■ 30.6
SCAF4-201ENST00000286835 SMIM9A6NGZ8 99 aa9.28□□□□□ -0.92
SCAF4-201ENST00000286835 GIG44P09565 113 aaPredicted RBP9.27□□□□□ -0.92
SCAF4-201ENST00000286835 APCP25054 2843 aa9.27□□□□□ -0.92
SCAF4-201ENST00000286835 HRCT1Q6UXD1 115 aa9.27□□□□□ -0.93
SCAF4-201ENST00000286835 C22orf24Q9Y442 160 aa9.27□□□□□ -0.93
SCAF4-201ENST00000286835 IGHV4-30-4P0DP06 118 aa9.26□□□□□ -0.93
SCAF4-201ENST00000286835 IGKV2D-24A0A075B6R9 120 aa9.25□□□□□ -0.93
SCAF4-201ENST00000286835 CYSRT1A8MQ03 144 aa9.25□□□□□ -0.93
SCAF4-201ENST00000286835 FAM19A3Q7Z5A8 133 aa9.25□□□□□ -0.93
SCAF4-201ENST00000286835 CAMK2N2Q96S95 79 aa9.25□□□□□ -0.93
SCAF4-201ENST00000286835 CR1P17927 2039 aa9.25□□□□□ -0.93
SCAF4-201ENST00000286835 IGHV4-28A0A0C4DH34 117 aa9.25□□□□□ -0.93
SCAF4-201ENST00000286835 PLAC8L1A1L4L8 177 aa9.25□□□□□ -0.93
SCAF4-201ENST00000286835 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
SCAF4-201ENST00000286835 CYSTM1Q9H1C7 97 aa9.25□□□□□ -0.93
SCAF4-201ENST00000286835 C5orf47Q569G3 176 aa9.25□□□□□ -0.93
SCAF4-201ENST00000286835 IL17DQ8TAD2 202 aa9.24□□□□□ -0.93
SCAF4-201ENST00000286835 KRTAP1-3Q8IUG1 177 aa9.24□□□□□ -0.93
SCAF4-201ENST00000286835 C10orf25Q5T742 122 aa9.23□□□□□ -0.93
SCAF4-201ENST00000286835 FAM236DA0A1B0GTK5 79 aa9.23□□□□□ -0.93
SCAF4-201ENST00000286835 FAM236CP0DP71 79 aa9.23□□□□□ -0.93
SCAF4-201ENST00000286835 C11orf45Q8TAV5 145 aa9.23□□□□□ -0.93
SCAF4-201ENST00000286835 ATP5EP2Q5VTU8 51 aa9.22□□□□□ -0.93
SCAF4-201ENST00000286835 RETNQ9HD89 108 aa9.22□□□□□ -0.93
SCAF4-201ENST00000286835 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
SCAF4-201ENST00000286835 TRBV10-3A0A0K0K1G6 114 aa9.21□□□□□ -0.93
SCAF4-201ENST00000286835 COX7BP24311 80 aa9.2□□□□□ -0.94
SCAF4-201ENST00000286835 C4orf26Q17RF5 130 aa9.2□□□□□ -0.94
SCAF4-201ENST00000286835 A0A1B0GUV1 79 aa9.2□□□□□ -0.94
SCAF4-201ENST00000286835 LINC00575Q6W349 94 aa9.2□□□□□ -0.94
SCAF4-201ENST00000286835 LYRM9A8MSI8 78 aa9.19□□□□□ -0.94
SCAF4-201ENST00000286835 MIFP14174 115 aa9.19□□□□□ -0.94
SCAF4-201ENST00000286835 C1orf43Q9BWL3 253 aa9.19□□□□□ -0.94
SCAF4-201ENST00000286835 DEFB131BA0A096LNP1 70 aa9.18□□□□□ -0.94
SCAF4-201ENST00000286835 COX17Q14061 63 aa9.18□□□□□ -0.94
SCAF4-201ENST00000286835 CSNK1G2-AS1Q8NCQ2 148 aa9.18□□□□□ -0.94
SCAF4-201ENST00000286835 C3orf84H3BNL1 204 aa9.18□□□□□ -0.94
SCAF4-201ENST00000286835 Q6ZVQ6 151 aa9.18□□□□□ -0.94
SCAF4-201ENST00000286835 NDUFC2O95298 119 aa9.17□□□□□ -0.94
SCAF4-201ENST00000286835 RMI2Q96E14 147 aa9.17□□□□□ -0.94
SCAF4-201ENST00000286835 LINC01547P58512 204 aaPredicted RBP9.17□□□□□ -0.94
SCAF4-201ENST00000286835 NREPQ16612 68 aa9.17□□□□□ -0.94
SCAF4-201ENST00000286835 HIVEP1P15822 2718 aa9.17□□□□□ -0.94
SCAF4-201ENST00000286835 Q8N9L7 120 aa9.16□□□□□ -0.94
SCAF4-201ENST00000286835 NKAPP1Q8N9T2 125 aa9.16□□□□□ -0.94
SCAF4-201ENST00000286835 F8WEM9 126 aa9.16□□□□□ -0.94
SCAF4-201ENST00000286835 KRTAP24-1Q3LI83 254 aa9.16□□□□□ -0.94
SCAF4-201ENST00000286835 ZNF73O43830 326 aaPredicted RBP9.15□□□□□ -0.94
SCAF4-201ENST00000286835 M0R2N4 97 aa9.15□□□□□ -0.94
SCAF4-201ENST00000286835 C19orf73Q9NVV2 129 aa9.15□□□□□ -0.95
SCAF4-201ENST00000286835 TRAV10A0A0B4J240 114 aa9.14□□□□□ -0.95
SCAF4-201ENST00000286835 CELA1Q9UNI1 258 aa9.14□□□□□ -0.95
SCAF4-201ENST00000286835 NANOS2P60321 138 aaKnown RBP9.13□□□□□ -0.95
SCAF4-201ENST00000286835 KRTAP1-1Q07627 177 aa9.13□□□□□ -0.95
SCAF4-201ENST00000286835 NSD1Q96L73 2696 aaPredicted RBP9.13□□□□□ -0.95
SCAF4-201ENST00000286835 X6R8D5 127 aa9.13□□□□□ -0.95
SCAF4-201ENST00000286835 KIAA0087Q14695 138 aa9.12□□□□□ -0.95
SCAF4-201ENST00000286835 TRAV7A0A075B6U4 112 aa9.12□□□□□ -0.95
SCAF4-201ENST00000286835 A0A0J9YWU9 116 aa9.12□□□□□ -0.95
SCAF4-201ENST00000286835 Q6ZQT0 140 aa9.12□□□□□ -0.95
SCAF4-201ENST00000286835 MPLKIPQ8TAP9 179 aa9.12□□□□□ -0.95
SCAF4-201ENST00000286835 PDE6GP18545 87 aa9.12□□□□□ -0.95
SCAF4-201ENST00000286835 MUC7Q8TAX7 377 aa9.11□□□□□ -0.95
SCAF4-201ENST00000286835 KPRPQ5T749 579 aaPredicted RBP9.11□□□□□ -0.95
SCAF4-201ENST00000286835 OBSCN-AS1Q96MR7 158 aa9.1□□□□□ -0.95
SCAF4-201ENST00000286835 RPS28P62857 69 aaKnown RBP9.1□□□□□ -0.95
SCAF4-201ENST00000286835 LELP1Q5T871 98 aa9.1□□□□□ -0.95
SCAF4-201ENST00000286835 SPATA3Q8NHX4 192 aa9.09□□□□□ -0.95
SCAF4-201ENST00000286835 Q8NDZ9 215 aa9.09□□□□□ -0.95
SCAF4-201ENST00000286835 BPY2O14599 106 aa9.09□□□□□ -0.95
SCAF4-201ENST00000286835 Q6ZTC4 211 aa9.08□□□□□ -0.96
SCAF4-201ENST00000286835 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.07□□□□□ -0.96
SCAF4-201ENST00000286835 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
SCAF4-201ENST00000286835 TM2D3Q9BRN9 247 aa9.07□□□□□ -0.96
SCAF4-201ENST00000286835 WFDC10BQ8IUB3 73 aa9.06□□□□□ -0.96
SCAF4-201ENST00000286835 BRK1Q8WUW1 75 aa9.06□□□□□ -0.96
SCAF4-201ENST00000286835 RPL37AP8A6NKH3 93 aa9.05□□□□□ -0.96
SCAF4-201ENST00000286835 PKIGQ9Y2B9 76 aa9.05□□□□□ -0.96
SCAF4-201ENST00000286835 FUSP35637 526 aaKnown RBP eCLIP9.05□□□□□ -0.96
SCAF4-201ENST00000286835 KRTAP10-3P60369 221 aa9.04□□□□□ -0.96
SCAF4-201ENST00000286835 A0A0U1RQV1 116 aa9.04□□□□□ -0.96
SCAF4-201ENST00000286835 ETDCA0A1B0GVM5 59 aa9.03□□□□□ -0.96
SCAF4-201ENST00000286835 UBE2BP63146 152 aa9.03□□□□□ -0.96
SCAF4-201ENST00000286835 Q6ZRU5 148 aa9.03□□□□□ -0.96
SCAF4-201ENST00000286835 M0R378 163 aa9.03□□□□□ -0.96
SCAF4-201ENST00000286835 SERP1Q9Y6X1 66 aa9.03□□□□□ -0.96
SCAF4-201ENST00000286835 LRCOL1A6NCL2 159 aa9.02□□□□□ -0.96
SCAF4-201ENST00000286835 NDUFC2-KCTD14E9PQ53 114 aa9.01□□□□□ -0.97
SCAF4-201ENST00000286835 H3BQ85 93 aa9.01□□□□□ -0.97
SCAF4-201ENST00000286835 OXTP01178 125 aa9.01□□□□□ -0.97
SCAF4-201ENST00000286835 PRR4Q16378 134 aa9.01□□□□□ -0.97
SCAF4-201ENST00000286835 FAM30AQ9NZY2 134 aa9.01□□□□□ -0.97
SCAF4-201ENST00000286835 LYPD5Q6UWN5 251 aa9.01□□□□□ -0.97
SCAF4-201ENST00000286835 LINC00167Q96N53 147 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms