RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 LRRK2Q5S007 2527 aa6.36□□□□□ -1.39
SMC2-201ENST00000286398 Q6ZQT0 140 aa6.36□□□□□ -1.39
SMC2-201ENST00000286398 C22orf24Q9Y442 160 aa6.36□□□□□ -1.39
SMC2-201ENST00000286398 AVPP01185 164 aa6.36□□□□□ -1.39
SMC2-201ENST00000286398 TRAV22A0A0B4J277 110 aa6.35□□□□□ -1.39
SMC2-201ENST00000286398 A0A1B0GW54 56 aa6.35□□□□□ -1.39
SMC2-201ENST00000286398 LINC01546A6NGU7 62 aa6.35□□□□□ -1.39
SMC2-201ENST00000286398 EXPH5Q8NEV8 1989 aa6.35□□□□□ -1.39
SMC2-201ENST00000286398 COA5Q86WW8 74 aa6.35□□□□□ -1.39
SMC2-201ENST00000286398 H3BS24 57 aa6.35□□□□□ -1.39
SMC2-201ENST00000286398 NHLRC4P0CG21 123 aaPredicted RBP6.35□□□□□ -1.39
SMC2-201ENST00000286398 C11orf72Q8NBR9 251 aa6.34□□□□□ -1.39
SMC2-201ENST00000286398 LYPD5Q6UWN5 251 aa6.34□□□□□ -1.39
SMC2-201ENST00000286398 BRI3O95415 125 aa6.34□□□□□ -1.4
SMC2-201ENST00000286398 Q8NBF4 154 aa6.34□□□□□ -1.4
SMC2-201ENST00000286398 UQCR11O14957 56 aa6.33□□□□□ -1.4
SMC2-201ENST00000286398 IGLV5-52A0A0A0MRZ9 124 aa6.33□□□□□ -1.4
SMC2-201ENST00000286398 LOC110117498A0A087WWA1 95 aa6.33□□□□□ -1.4
SMC2-201ENST00000286398 LY6G6DO95868 133 aa6.33□□□□□ -1.4
SMC2-201ENST00000286398 NUPR2A6NF83 97 aa6.32□□□□□ -1.4
SMC2-201ENST00000286398 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
SMC2-201ENST00000286398 LOC101927531A0A1B0GV80 90 aa6.32□□□□□ -1.4
SMC2-201ENST00000286398 APLNQ9ULZ1 77 aa6.32□□□□□ -1.4
SMC2-201ENST00000286398 WDR87Q6ZQQ6 2873 aa6.32□□□□□ -1.4
SMC2-201ENST00000286398 LINC00315P59091 139 aa6.32□□□□□ -1.4
SMC2-201ENST00000286398 MTORP42345 2549 aa6.31□□□□□ -1.4
SMC2-201ENST00000286398 IGLV5-45A0A087WSX0 123 aa6.31□□□□□ -1.4
SMC2-201ENST00000286398 RPL37AP61513 92 aaKnown RBP6.3□□□□□ -1.4
SMC2-201ENST00000286398 LINC00167Q96N53 147 aa6.3□□□□□ -1.4
SMC2-201ENST00000286398 TET2Q6N021 2002 aaPredicted RBP6.3□□□□□ -1.4
SMC2-201ENST00000286398 ELOF1P60002 83 aaKnown RBP6.29□□□□□ -1.4
SMC2-201ENST00000286398 LINC01554Q52M75 96 aa6.29□□□□□ -1.4
SMC2-201ENST00000286398 LINC00476Q8WZB0 136 aa6.29□□□□□ -1.4
SMC2-201ENST00000286398 MOBPQ13875 183 aa6.29□□□□□ -1.4
SMC2-201ENST00000286398 KIAA1549LQ6ZVL6 1849 aa6.29□□□□□ -1.4
SMC2-201ENST00000286398 ERC2-IT1O76042 136 aa6.28□□□□□ -1.4
SMC2-201ENST00000286398 SPACA4Q8TDM5 124 aa6.28□□□□□ -1.4
SMC2-201ENST00000286398 CEP192Q8TEP8 1941 aa6.28□□□□□ -1.4
SMC2-201ENST00000286398 TRBV7-4A0A0J9YYF1 115 aa6.27□□□□□ -1.41
SMC2-201ENST00000286398 POLQO75417 2590 aa6.26□□□□□ -1.41
SMC2-201ENST00000286398 CDSNQ15517 529 aa6.26□□□□□ -1.41
SMC2-201ENST00000286398 Q6ZRX8 168 aa6.25□□□□□ -1.41
SMC2-201ENST00000286398 KLKP1Q107X0 134 aa6.24□□□□□ -1.41
SMC2-201ENST00000286398 C9orf129Q5T035 196 aaKnown RBP6.24□□□□□ -1.41
SMC2-201ENST00000286398 SPTBN4Q9H254 2564 aa6.23□□□□□ -1.41
SMC2-201ENST00000286398 LINC00313P59037 77 aa6.23□□□□□ -1.41
SMC2-201ENST00000286398 FHL3Q13643 280 aa6.23□□□□□ -1.41
SMC2-201ENST00000286398 PRR15Q8IV56 129 aa6.22□□□□□ -1.41
SMC2-201ENST00000286398 ST20-AS1Q8NBB2 130 aa6.22□□□□□ -1.41
SMC2-201ENST00000286398 LUZP6Q538Z0 58 aa6.22□□□□□ -1.41
SMC2-201ENST00000286398 CHD8Q9HCK8 2581 aa6.22□□□□□ -1.41
SMC2-201ENST00000286398 K7EQZ3 153 aa6.22□□□□□ -1.41
SMC2-201ENST00000286398 C1orf134Q5TEV5 83 aa6.22□□□□□ -1.41
SMC2-201ENST00000286398 RBM12B-AS1Q9P1G2 102 aa6.21□□□□□ -1.41
SMC2-201ENST00000286398 LRP4O75096 1905 aa6.21□□□□□ -1.41
SMC2-201ENST00000286398 LITAFQ99732 161 aa6.21□□□□□ -1.42
SMC2-201ENST00000286398 EPM2AB3EWF7 344 aa6.2□□□□□ -1.42
SMC2-201ENST00000286398 H7BZZ5 65 aa6.2□□□□□ -1.42
SMC2-201ENST00000286398 WIPF1O43516 503 aa6.19□□□□□ -1.42
SMC2-201ENST00000286398 A8MWP4 228 aa6.19□□□□□ -1.42
SMC2-201ENST00000286398 SMR3AQ99954 134 aa6.19□□□□□ -1.42
SMC2-201ENST00000286398 COL5A1P20908 1838 aaPredicted RBP6.19□□□□□ -1.42
SMC2-201ENST00000286398 ADAMTS20P59510 1910 aa6.19□□□□□ -1.42
SMC2-201ENST00000286398 CDC42SE1Q9NRR8 79 aa6.19□□□□□ -1.42
SMC2-201ENST00000286398 CEP295Q9C0D2 2601 aa6.19□□□□□ -1.42
SMC2-201ENST00000286398 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
SMC2-201ENST00000286398 A0A1W2PPR1 153 aa6.18□□□□□ -1.42
SMC2-201ENST00000286398 C16orf95Q9H693 158 aa6.18□□□□□ -1.42
SMC2-201ENST00000286398 RAI1Q7Z5J4 1906 aaPredicted RBP6.18□□□□□ -1.42
SMC2-201ENST00000286398 MRPL34Q9BQ48 92 aaKnown RBP6.17□□□□□ -1.42
SMC2-201ENST00000286398 PHF5AQ7RTV0 110 aaKnown RBP6.17□□□□□ -1.42
SMC2-201ENST00000286398 KRTAP10-9P60411 292 aa6.16□□□□□ -1.42
SMC2-201ENST00000286398 Q96NJ1 140 aa6.16□□□□□ -1.42
SMC2-201ENST00000286398 PTPRBP23467 1997 aa6.16□□□□□ -1.42
SMC2-201ENST00000286398 ANKRD11Q6UB99 2663 aaPredicted RBP6.16□□□□□ -1.42
SMC2-201ENST00000286398 PTPRSQ13332 1948 aa6.16□□□□□ -1.42
SMC2-201ENST00000286398 IGLV6-57P01721 117 aa6.15□□□□□ -1.42
SMC2-201ENST00000286398 USP24Q9UPU5 2620 aa6.14□□□□□ -1.43
SMC2-201ENST00000286398 A0A0D9SG42 100 aa6.13□□□□□ -1.43
SMC2-201ENST00000286398 GVQW2A0A096LPI5 108 aaPredicted RBP6.12□□□□□ -1.43
SMC2-201ENST00000286398 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
SMC2-201ENST00000286398 Q6ZRP5 223 aa6.11□□□□□ -1.43
SMC2-201ENST00000286398 C16orf90A8MZG2 172 aa6.11□□□□□ -1.43
SMC2-201ENST00000286398 CHTF8P0CG12 524 aa6.11□□□□□ -1.43
SMC2-201ENST00000286398 H3BNG1 76 aa6.1□□□□□ -1.43
SMC2-201ENST00000286398 LINC00528Q8N1L1 170 aa6.1□□□□□ -1.43
SMC2-201ENST00000286398 TYMSOSQ8TAI1 123 aa6.1□□□□□ -1.43
SMC2-201ENST00000286398 C8orf17Q9NRJ1 99 aa6.09□□□□□ -1.43
SMC2-201ENST00000286398 PRO3102Q9H379 93 aa6.09□□□□□ -1.44
SMC2-201ENST00000286398 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
SMC2-201ENST00000286398 C10orf142B7Z368 130 aa6.08□□□□□ -1.44
SMC2-201ENST00000286398 IGFL1Q6UW32 110 aa6.08□□□□□ -1.44
SMC2-201ENST00000286398 PRAC1Q96KF2 57 aa6.08□□□□□ -1.44
SMC2-201ENST00000286398 CPAMD8Q8IZJ3 1885 aa6.08□□□□□ -1.44
SMC2-201ENST00000286398 Q1T7F1 81 aa6.08□□□□□ -1.44
SMC2-201ENST00000286398 FASNP49327 2511 aaKnown RBP6.08□□□□□ -1.44
SMC2-201ENST00000286398 KCNQ1DNQ9H478 68 aa6.07□□□□□ -1.44
SMC2-201ENST00000286398 DSCR10P59022 87 aa6.07□□□□□ -1.44
SMC2-201ENST00000286398 CSNK1G2-AS1Q8NCQ2 148 aa6.06□□□□□ -1.44
SMC2-201ENST00000286398 FAM168BA1KXE4 195 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms